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Basu P, Crich D. The Stereoselectivity of Neighboring Group-Directed Glycosylation Is Concentration-Dependent. J Am Chem Soc 2025; 147:5808-5818. [PMID: 39907188 PMCID: PMC11848824 DOI: 10.1021/jacs.4c14402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2024] [Revised: 01/18/2025] [Accepted: 01/21/2025] [Indexed: 02/06/2025]
Abstract
The formation of 1,2-trans-glycosides taking advantage of neighboring group participation by stereodirecting esters at the 2-position of glycosyl donors is widely held to be a robust and reliable protocol. Examples abound, however, of cases in which less-than-perfect selectivity is obtained, causing practitioners to survey different esters or resort to alternative strategies in the quest for optimal selectivities and yields. Consideration of the mechanism of neighboring group participation and in particular of the competing process of SN2-like glycosylation with activated covalent donors leads to the hypothesis that in cases of imperfect selectivity, more careful attention to reaction concentration and stoichiometry may be beneficial. Three case studies are presented to demonstrate the concentration dependence of neighboring group-directed glycosylation reactions targeting the formation of both 1,2-trans-equatorial and 1,2-trans-axial glycosides. Higher concentrations, whether achieved through increased acceptor:donor stoichiometry or through increased concentration at a fixed stoichiometry, mostly lead to erosion of 1,2-trans-selectivity as the competing SN2-like reaction with the covalent donors becomes increasingly important. These observations underline the importance of a rational, mechanism-based approach to glycosylation in general and more importantly suggest a simple approach to enhancing 1,2-trans-selectivity in neighboring group-directed glycosylation reactions displaying less-than-perfect 1,2-trans-selectivity, namely, moving to a different concentration regime.
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Affiliation(s)
- Pallabita Basu
- Department
of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States
- Complex Carbohydrate
Research Center, University of Georgia, 315 Riverbend Road, Athens, Georgia 30602, United States
| | - David Crich
- Department
of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States
- Complex Carbohydrate
Research Center, University of Georgia, 315 Riverbend Road, Athens, Georgia 30602, United States
- Department
of Chemistry, University of Georgia, 302 East Campus Road, Athens, Georgia 30602, United States
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Das R, Mukhopadhyay B. The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation. Beilstein J Org Chem 2025; 21:369-406. [PMID: 39996165 PMCID: PMC11849559 DOI: 10.3762/bjoc.21.27] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2024] [Accepted: 01/27/2025] [Indexed: 02/26/2025] Open
Abstract
Stereoselective glycosylations are one of the most challenging tasks of synthetic glycochemists. The protecting building blocks on the glycosides contribute significantly in attaining the required stereochemistry of the resulting glycosides. Strategic installation of suitable protecting groups in the C-2 position, vicinal to the anomeric carbon, renders neighbouring group participation, whereas protecting groups in the distal C-3, C-4, and C-6 positions are often claimed to exhibit remote group participation with the anomeric carbon. Neighbouring group participation and remote group participation are being widely studied to help the glycochemists design the synthetic protocols for multistep synthesis of complex oligosaccharides and in turn, standardise the process of the glycosylation towards a particular stereochemical output. While neighbouring group participation has been quite effective in achieving the required stereochemistry of the produced glycosides, remote participation exhibits comparatively less efficacy in achieving complete stereoselectivity in the glycosylation reactions. Remote participation is a still highly debated topic in the scientific community. However, implementing the participating role of the remote groups in glycosylation reactions is widely practised to achieve better stereocontrol and to facilitate the formation of synthetically challenging glycosidic linkages.
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Affiliation(s)
- Rituparna Das
- SWEET Lab, Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia 741246, India
| | - Balaram Mukhopadhyay
- SWEET Lab, Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia 741246, India
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Kwok RW, Rutkoski R, Nagorny P, Marianski M. Stereoelectronic Effect of Protecting Groups on the Stability of Galactosyl Donor Intermediates. Molecules 2025; 30:218. [PMID: 39860088 PMCID: PMC11767833 DOI: 10.3390/molecules30020218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2024] [Revised: 12/03/2024] [Accepted: 12/20/2024] [Indexed: 01/27/2025] Open
Abstract
Using methods of DFT, we investigated the effect of electron withdrawing and electron donating groups on the relative stability of tentative glycosyl donor reaction intermediates. The calculation shows that by changing the stereoelectronic properties of the protecting group, we can influence the stability of the dioxolenium type of intermediates by up to 10 kcal mol-1, and that by increasing nucleophillicity of the 4-O-Bz group, the dioxolenium intermediate becomes more stable than a triflate-donor pair. We exploited this mechanism to design galactosyl donors with custom protecting groups on O2 and O4, and investigated the outcome of the reaction with cyclohexanol. The reaction showed no change in the product distribution, which suggests that the neighboring group participation takes precedence over remote group participation due to kinetic barriers.
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Affiliation(s)
- Ryan W. Kwok
- Department of Chemistry, Hunter College, The City University of New York, 695 Park Ave., New York, NY 10065, USA;
- PhD Program in Chemistry, The Graduate Center, The City University of New York, 365th Ave., New York, NY 10016, USA
| | - Ryan Rutkoski
- Department of Chemistry, University of Michigan, 930 University Ave., Ann Arbor, MI 48109, USA;
| | - Pavel Nagorny
- Department of Chemistry, University of Michigan, 930 University Ave., Ann Arbor, MI 48109, USA;
| | - Mateusz Marianski
- Department of Chemistry, Hunter College, The City University of New York, 695 Park Ave., New York, NY 10065, USA;
- PhD Program in Chemistry, The Graduate Center, The City University of New York, 365th Ave., New York, NY 10016, USA
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Ter Braak F, Houthuijs KJ, Elferink H, Kromm A, van Wieringen T, Berden G, Martens J, Oomens J, Boltje TJ. Investigation of Neighboring Group Participation in 3,4-Diacetylated Glycosyl Donors in the Gas Phase. Chemistry 2024; 30:e202402584. [PMID: 39222485 DOI: 10.1002/chem.202402584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 08/26/2024] [Accepted: 08/28/2024] [Indexed: 09/04/2024]
Abstract
A key challenge in oligosaccharide synthesis is the stereoselective installation of glycosidic bonds. Each glycosidic linkage has one of two possible stereo-chemical geometries, α/β or 1,2-cis/trans. An established approach to install 1,2-trans glycosidic bonds is neighboring group participation (NGP), mediated by a 2-O-acyl group. Extension of this intramolecular stabilization to nucleophilic groups located at more remote positions has also been suggested, but remains poorly understood. Previously, we employed infrared ion spectroscopy to characterize the molecular ions of monoacetylated sugar donors and showed how the strength of the stabilizing effect depends on the position of the participating ester group on the glycosyl donor ring as well as on its relative stereochemistry. In this work, we investigated glycosyl donors carrying two acyl groups. Using isotope labelling and isomer population analysis we were able to resolving spectra of isomeric mixtures and establish the relative contribution of individual species. We conclude that 3,4-diacetyl mannosyl donors exclusively form a dioxanium ion as a result of C-3 acyl stabilization. In contrast, the glucosyl and galactosyl cations form mixtures of C-3 and C-4 acyl participation products. Hence, the combination of isotope labeling and population analysis allows for the study of increasingly complex glycosyl cations.
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Affiliation(s)
- Floor Ter Braak
- Synthetic Organic Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, the, Netherlands
| | - Kas J Houthuijs
- FELIX laboratory, Institute for Molecules and Materials, Radboud University Nijmegen, Toernooiveld 7, 6525 ED, Nijmegen, the, Netherlands
| | - Hidde Elferink
- Synthetic Organic Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, the, Netherlands
| | - Alexandra Kromm
- Synthetic Organic Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, the, Netherlands
| | - Teun van Wieringen
- FELIX laboratory, Institute for Molecules and Materials, Radboud University Nijmegen, Toernooiveld 7, 6525 ED, Nijmegen, the, Netherlands
| | - Giel Berden
- FELIX laboratory, Institute for Molecules and Materials, Radboud University Nijmegen, Toernooiveld 7, 6525 ED, Nijmegen, the, Netherlands
| | - Jonathan Martens
- FELIX laboratory, Institute for Molecules and Materials, Radboud University Nijmegen, Toernooiveld 7, 6525 ED, Nijmegen, the, Netherlands
| | - Jos Oomens
- FELIX laboratory, Institute for Molecules and Materials, Radboud University Nijmegen, Toernooiveld 7, 6525 ED, Nijmegen, the, Netherlands
| | - Thomas J Boltje
- Synthetic Organic Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, the, Netherlands
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Gao Y, Chen W, Zhao J, Yang M, Zhang Y, Chen C, Yao L, Xu J, Wang F, Zhang B, Gu G, Tang B, Cai F. Exploring the Dual Functions of Distal Acyl Group Direction in Various Nucleophilic Environments. J Org Chem 2024; 89:2375-2396. [PMID: 38288704 DOI: 10.1021/acs.joc.3c02397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
A universal glycosylation strategy could significantly simplify glycoside synthesis. One approach to achieving this goal is through acyl group direction for the corresponding 1,2-, 1,3-, 1,4-, or 1,6-trans glycosylation; however, this approach has been challenging for glycosidic bonds that require distal equatorial-acyl group direction. We developed an approach in weakly nucleophilic environments for selective 1,4-trans glycosylation directed by the equatorial-4-O-acyl group. Here, we explored this condition in other distal acyl groups and found that, besides 1,n-trans direction, acyl groups also mediated hydrogen bonding between acyl groups and alcohols. The latter showed a diverse effect and classified the acyl group direction into axial and equatorial categories. Corresponding glycosylation conditions were distinguished as guidance for acyl group direction from either category. Hence, acyl group direction may serve as a general glycosylation strategy.
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Affiliation(s)
- Yongtao Gao
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Wenjie Chen
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Juan Zhao
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Min Yang
- Center for Analysis and Characterization, School of Physical Science and Technology, ShanghaiTech University, 393 Huaxia Middle Rd, Shanghai 201210, China
| | - Yongliang Zhang
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Changsheng Chen
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Linbin Yao
- Faculty of Science and Engineering, The University of Nottingham Ningbo China, 199 Taikang E Rd, Ningbo 315100, China
| | - Jiayuan Xu
- Faculty of Science and Engineering, The University of Nottingham Ningbo China, 199 Taikang E Rd, Ningbo 315100, China
| | - Fei Wang
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Bangzhi Zhang
- Key Laboratory of Preclinical Study for New Drugs of Gansu Province, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China
| | - Guofeng Gu
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
| | - Bencan Tang
- Faculty of Science and Engineering, The University of Nottingham Ningbo China, 199 Taikang E Rd, Ningbo 315100, China
| | - Feng Cai
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Rd, Qingdao 266237, China
- Key Laboratory of Preclinical Study for New Drugs of Gansu Province, School of Basic Medical Sciences, Lanzhou University, Lanzhou 730000, China
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