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Gao X, Menche D. Sequential Methods for Di- and Tetrahydro-Pyranone Synthesis Enable Concise Access to Tuscolid δ-Lactone. Chem Asian J 2023; 18:e202201193. [PMID: 36541601 PMCID: PMC10108315 DOI: 10.1002/asia.202201193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 12/21/2022] [Accepted: 12/21/2022] [Indexed: 12/24/2022]
Abstract
Two novel tandem sequences for stereoselective synthesis of elaborate hydropyranones are reported. The first one relies on an aldol-lactonization procedure of a chiral enolate with an unprotected aldehyde, while the second one is based on a challenging dienolate ketone addition with concomitant cyclization and substrate controlled reduction. Both approaches proceed with high efficiency and stereoselectivity and enable very short accesses to the authentic pyranone subunit of the complex polyketide tuscolid and will be important to develop a first total synthesis of this structurally unique macrolide and to evaluate the tuscolid-tuscoron rearrangement.
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Affiliation(s)
- Xin Gao
- Kekulé-Institut für Organische Chemie und Biochemie, Universität Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany
| | - Dirk Menche
- Kekulé-Institut für Organische Chemie und Biochemie, Universität Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany
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2
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Cassemiro NS, Sanches LB, Kato NN, Ruller R, Carollo CA, de Mello JCP, Dos Santos Dos Anjos E, Silva DB. New derivatives of the iridoid specioside from fungal biotransformation. Appl Microbiol Biotechnol 2021; 105:7731-7741. [PMID: 34568964 DOI: 10.1007/s00253-021-11504-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 06/11/2021] [Accepted: 08/05/2021] [Indexed: 11/28/2022]
Abstract
Iridoids are widely found from species of Bignoniaceae family and exhibit several biological activities, such as anti-inflammatory, antimicrobial, antioxidant, and antitumor. Specioside is an iridoid found from Tabebuia species, mainly in Tabebuia aurea. Thus, here fungus-mediated biotransformation of the iridoid specioside was investigated by seven fungi. The fungus-mediated biotransformation reactions resulted in a total of nineteen different analogs by fungus Aspergillus niger, Aspergillus flavus, Aspergillus japonicus, Aspergillus terreus, Aspergillus niveus, Penicillium crustosum, and Thermoascus aurantiacus. Non-glycosylated specioside was the main metabolite observed. The other analogs were yielded from ester hydrolysis, hydroxylation, methylation, and hydrogenation reactions. The non-glycosylated specioside and coumaric acid were yielded by all fungi-mediated biotransformation. Thus, fungus applied in this study showed the ability to perform hydroxylation and glycosidic, as well as ester hydrolysis reactions from glycosylated iridoid. KEY POINTS: • The biotransformation of specioside by seven fungi yielded nineteen analogs. • The non-glycosylated specioside was the main analog obtained. • Ester hydrolysis, hydroxylation, methylation, and hydrogenation reactions were observe.
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Affiliation(s)
- Nadla Soares Cassemiro
- Laboratório de Produtos Naturais E Espectrometria de Massas (LaPNEM), Faculdade de Ciências Farmacêuticas, Alimentos E Nutrição (FACFAN), Universidade Federal Do Mato Grosso Do Sul, Av. Costa e Silva, s/nº, Campo Grande, MS, 79070-900, Brazil
| | - Luana Bonifácio Sanches
- Laboratório de Produtos Naturais E Espectrometria de Massas (LaPNEM), Faculdade de Ciências Farmacêuticas, Alimentos E Nutrição (FACFAN), Universidade Federal Do Mato Grosso Do Sul, Av. Costa e Silva, s/nº, Campo Grande, MS, 79070-900, Brazil
| | - Natalia Naomi Kato
- Laboratório de Produtos Naturais E Espectrometria de Massas (LaPNEM), Faculdade de Ciências Farmacêuticas, Alimentos E Nutrição (FACFAN), Universidade Federal Do Mato Grosso Do Sul, Av. Costa e Silva, s/nº, Campo Grande, MS, 79070-900, Brazil
| | - Roberto Ruller
- Laboratório de Bioquímica, Instituto de Biociências (INBIO), Universidade Federal de Mato Grosso Do Sul (UFMS), Campo Grande, MS, Brazil
| | - Carlos Alexandre Carollo
- Laboratório de Produtos Naturais E Espectrometria de Massas (LaPNEM), Faculdade de Ciências Farmacêuticas, Alimentos E Nutrição (FACFAN), Universidade Federal Do Mato Grosso Do Sul, Av. Costa e Silva, s/nº, Campo Grande, MS, 79070-900, Brazil
| | - João Carlos Palazzo de Mello
- Laboratório de Biologia Farmacêutica, Departamento de Farmácia, Universidade Estadual de Maringá, Maringá, PR, Brazil
| | - Edson Dos Santos Dos Anjos
- Laboratório de Bioquímica, Instituto de Biociências (INBIO), Universidade Federal de Mato Grosso Do Sul (UFMS), Campo Grande, MS, Brazil
| | - Denise Brentan Silva
- Laboratório de Produtos Naturais E Espectrometria de Massas (LaPNEM), Faculdade de Ciências Farmacêuticas, Alimentos E Nutrição (FACFAN), Universidade Federal Do Mato Grosso Do Sul, Av. Costa e Silva, s/nº, Campo Grande, MS, 79070-900, Brazil.
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3
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Bauer JO, Koschabek S, Falk A. Interplay of Hydrogen and Halogen Bonding in the Crystal Structures of 2,6‐Dihalogenated Phenols. ChemistrySelect 2021. [DOI: 10.1002/slct.202101723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Jonathan O. Bauer
- Institut für Anorganische Chemie, Fakultät für Chemie und Pharmazie Universität Regensburg Universitätsstraße 31 D-93053 Regensburg Germany
| | - Sarah Koschabek
- Institut für Anorganische Chemie, Fakultät für Chemie und Pharmazie Universität Regensburg Universitätsstraße 31 D-93053 Regensburg Germany
| | - Alexander Falk
- Institut für Anorganische Chemie, Fakultät für Chemie und Pharmazie Universität Regensburg Universitätsstraße 31 D-93053 Regensburg Germany
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4
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Kouda R, Yakushiji F. Recent Advances in Iridoid Chemistry: Biosynthesis and Chemical Synthesis. Chem Asian J 2020; 15:3771-3783. [PMID: 33016562 DOI: 10.1002/asia.202001034] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Revised: 09/30/2020] [Indexed: 01/11/2023]
Abstract
Iridoids are a large family of monoterpenoids found in traditional medicinal plants and show significant effects for the human species. In addition to their wide range of biological activities, such as neuroprotective and antitumor activities, the cis-fused bicyclic ring systems of iridoids are still attractive as synthetic targets to apply novel synthetic methodologies. Accordingly, recent progress regarding the biosynthesis and chemical synthesis of iridoids is covered in this minireview. Identification of new enzymes for the iridoid biosynthesis in Catharanthus roseus and ingenious synthetic strategies for the construction of the iridoid skeleton are described.
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Affiliation(s)
- Ryuji Kouda
- Faculty of Pharmaceutical Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo, 060-0812, Japan
| | - Fumika Yakushiji
- Faculty of Pharmaceutical Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo, 060-0812, Japan.,Center for Research and Education on Drug Discovery, Faculty of Pharmaceutical Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo, 060-0812, Japan
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5
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Qu Z, Ma L, Zhang Q, Yang R, Hou G, Wang Y, Zhao F. Characterization, crystal structure and cytotoxic activity of a rare iridoid glycoside from Lonicera saccata. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2020; 76:269-275. [PMID: 32132285 DOI: 10.1107/s2053229620001977] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Accepted: 02/11/2020] [Indexed: 12/17/2022]
Abstract
A new iridoid glycoside, methyl (3R,4R,4aS,7S,7aR)-3-hydroxy-7-methyl-5-oxooctahydrocyclopenta[c]pyran-4-carboxylate-3-O-β-D-(1'S,2'R,3'S,4'S,5'R)-glucopyranoside, named loniceroside A, C17H26O10, (1), was obtained from the aerial parts of Lonicera saccata. Its structure was established based on an analysis of spectroscopic data, including 1D NMR, 2D NMR and HRESIMS, and the configurations of the chiral C atoms were determined by X-ray crystallographic analysis. The single-crystal structure reveals that the cyclopenta[c]pyran scaffold is formed from a five-membered ring and a chair-like six-membered ring connected through two bridgehead chiral C atoms. In the solid state, the glucose group of (1) plays an important role in constructing an unusual supramolecular motif. The structure analysis revealed adjacent molecules linked together through intermolecular O-H...O hydrogen bonds to generate a banded structure. Furthermore, the banded structures are linked into a three-dimensional network by interesting hydrogen bonds. Biogenetically, compound (1) carries a glucopyranosyloxy moiety at the C-3 position, representing a rare structural feature for naturally occurring iridoid glycosides. The growth inhibitory effects against human cervical carcinoma cells (Hela), human lung adenocarcinoma cells (A549), human acute mononuclear granulocyte leukaemia (THP-1) and the human liver hepatocellular carcinoma cell line (HepG2) were evaluated by the MTT method.
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Affiliation(s)
- Zhaoxia Qu
- School of Pharmacy, The Key Laboratory of Prescription Effect and Clinical Evaluation of State Administration of Traditional Chinese Medicine of China, Binzhou Medical University, Guanhai Road 346#, Yantai, Shandong 264003, People's Republic of China
| | - Li Ma
- Yantai Stomatological Hospital, Yantai, Shandong 264001, People's Republic of China
| | - Qi Zhang
- School of Pharmacy, The Key Laboratory of Prescription Effect and Clinical Evaluation of State Administration of Traditional Chinese Medicine of China, Binzhou Medical University, Guanhai Road 346#, Yantai, Shandong 264003, People's Republic of China
| | - Renyong Yang
- School of Pharmacy, The Key Laboratory of Prescription Effect and Clinical Evaluation of State Administration of Traditional Chinese Medicine of China, Binzhou Medical University, Guanhai Road 346#, Yantai, Shandong 264003, People's Republic of China
| | - Guige Hou
- School of Pharmacy, The Key Laboratory of Prescription Effect and Clinical Evaluation of State Administration of Traditional Chinese Medicine of China, Binzhou Medical University, Guanhai Road 346#, Yantai, Shandong 264003, People's Republic of China
| | - Yanan Wang
- State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, People's Republic of China
| | - Feng Zhao
- School of Pharmacy, The Key Laboratory of Prescription Effect and Clinical Evaluation of State Administration of Traditional Chinese Medicine of China, Binzhou Medical University, Guanhai Road 346#, Yantai, Shandong 264003, People's Republic of China
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6
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Chen P, Zhang D, Li M, Wu Q, Lam YPY, Guo Y, Chen C, Bai N, Malhotra S, Li W, O'Connor PB, Fu H. Discovery of novel, potent, isosteviol-based antithrombotic agents. Eur J Med Chem 2019; 183:111722. [PMID: 31563807 DOI: 10.1016/j.ejmech.2019.111722] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Revised: 09/18/2019] [Accepted: 09/19/2019] [Indexed: 12/24/2022]
Abstract
Thrombosis is a pathological coagulation process and can lead to many serious thrombotic diseases. Here, we report a novel potent antithrombotic compound (6k) based on isosteviol with anticoagulant and antiplatelet activities. 6k selectively inhibited FXa (Ki = 0.015 μM) against a panel of serine proteases and showed excellent anticoagulant activity (significant prolongation of ex vivo PT and aPTT over the vehicle, p < 0.01). 6k also significantly inhibited ADP-induced platelet aggregation in rats relative to the vehicle (p < 0.01). Furthermore, 6k exhibited potent ex vivo and in vivo antithrombotic activity in rats relative to the vehicle (p < 0.01 and p < 0.0001, respectively). Novel structure 6k, with potent antithrombotic activity, is expected to lead a promising approach for the development of antithrombotic agents.
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Affiliation(s)
- Peng Chen
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, No.38 Xueyuan Road, Haidian District, Beijing, 100191, China
| | - Dianwen Zhang
- Academy of Chinese Medical Sciences of Jilin Province, No.155 Chuangju Road, Changchun, 130012, China
| | - Meng Li
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK
| | - Qiong Wu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, No.38 Xueyuan Road, Haidian District, Beijing, 100191, China
| | - Yuko P Y Lam
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK
| | - Yan Guo
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, No.38 Xueyuan Road, Haidian District, Beijing, 100191, China
| | - Chen Chen
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, No.38 Xueyuan Road, Haidian District, Beijing, 100191, China
| | - Nan Bai
- Program in Molecular Therapeutics, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, United States; Department of Molecular Biosciences, University of Kansas, 1200 Sunnyside Avenue, Lawrence, KS, 66045, United States
| | - Shipra Malhotra
- Program in Molecular Therapeutics, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, United States; Center for Computational Biology, University of Kansas, 2030 Becker Drive, Lawrence, KS, 66047, United States
| | - Wei Li
- Academy of Chinese Medical Sciences of Jilin Province, No.155 Chuangju Road, Changchun, 130012, China
| | - Peter B O'Connor
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK
| | - Hongzheng Fu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, No.38 Xueyuan Road, Haidian District, Beijing, 100191, China.
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7
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Jiang Y, Zou JX, Huang LT, Peng X, Deng JD, Zhu LQ, Yang YH, Feng YY, Zhang XY, Wang Z. KI-catalyzed C-S bond formation via an oxidation relay strategy: efficient access to various α-thio-β-dicarbonyl compounds. Org Biomol Chem 2019; 16:1641-1645. [PMID: 29461552 DOI: 10.1039/c8ob00080h] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
An efficient and practical methodology to obtain α-thio-β-dicarbonyl compounds was presented under alkaline conditions via potassium iodide (KI) catalysis; various symmetrical/unsymmetrical 1,3-dicarbonyl compounds were obtained under an aerobic atmosphere in moderate to excellent yields, with good functional group tolerance. Notably, a widely used anti-inflammatory drug butazodine could be modified with our protocol, even on a gram scale.
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Affiliation(s)
- Yi Jiang
- School of Pharmacy, Lanzhou University, West Donggang Road. No. 199, Lanzhou 730000, China.
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8
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Affiliation(s)
- Kamal Kumar
- Max-Planck-Institut für molekulare PhysiologieAbteilung Chemische Biologie Otto-Hahn Str. 11 44227- Dortmund Germany
| | - Herbert Waldmann
- Max-Planck-Institut für molekulare PhysiologieAbteilung Chemische Biologie Otto-Hahn Str. 11 44227- Dortmund Germany
- Technische Universität DortmundFakultät Chemie, Chemische Biologie Otto-Hahn-Straße 6 Dortmund 44221 Germany
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Highly Stereoselective Synthesis of a Compound Collection Based on the Bicyclic Scaffolds of Natural Products. Molecules 2017; 22:molecules22050827. [PMID: 28524077 PMCID: PMC6153746 DOI: 10.3390/molecules22050827] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Revised: 05/11/2017] [Accepted: 05/12/2017] [Indexed: 11/17/2022] Open
Abstract
Despite the great contribution of natural products in the history of successful drug discovery, there are significant limitations that persuade the pharmaceutical industry to evade natural products in drug discovery research. The extreme scarcity as well as structural complexity of natural products renders their practical synthetic access and further modifications extremely challenging. Although other alternative technologies, particularly combinatorial chemistry, were embraced by the pharmaceutical industry to get quick access to a large number of small molecules with simple frameworks that often lack three-dimensional complexity, hardly any success was achieved in the discovery of lead molecules. To acquire chemotypes beholding structural features of natural products, for instance high sp³ character, the synthesis of compound collections based on core-scaffolds of natural products presents a promising strategy. Here, we report a natural product inspired synthesis of six different chemotypes and their derivatives for drug discovery research. These bicyclic hetero- and carbocyclic scaffolds are highly novel, rich in sp³ features and with ideal physicochemical properties to display drug likeness. The functional groups on the scaffolds were exploited further to generate corresponding compound collections. Synthesis of two of these collections exemplified with ca. 350 compounds are each also presented. The whole compound library is being exposed to various biological screenings within the European Lead Factory consortium.
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Spear KL, Brown SP. The evolution of library design: crafting smart compound collections for phenotypic screens. DRUG DISCOVERY TODAY. TECHNOLOGIES 2017; 23:61-67. [PMID: 28647087 DOI: 10.1016/j.ddtec.2017.05.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Revised: 04/03/2017] [Accepted: 05/08/2017] [Indexed: 01/06/2025]
Abstract
The (re)emergence of phenotypic drug discovery has been marked by a growing interest in screening campaigns that utilize phenotypic assays. The key objectives of phenotypic screens are different from those of target-based screens and can require alternate library-design strategies. Designing a library that is appropriate to the selected assay increases the likelihood of identifying better quality hits, which can reduce both timelines and overall cost of the drug-discovery process. Here, we provide an overview of small-molecule library design principles as applied to phenotypic screening.
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Affiliation(s)
| | - Scott P Brown
- Sunovion Pharmaceuticals Inc., 84 Waterford Dr., Marlborough, MA 01752, USA
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