Molecular Organization of 2,1,3-Benzothiadiazoles in the Solid State

An innovative deep eutectic solvent: chalcogen bonding as the primary driving force

Chalcogen bonding (ChB) interactions have drawn intensive attention in the last few decades as interesting alternatives to hydrogen bonding. The applications of ChB were mostly centered on the solid state and have rarely been explored in solution. In this work, a novel strategy for forming ChB-based deep eutectic solvents (DESs) was exploited. We set forth the formation, physicochemical properties, and interaction sites in detail. This work not only provides a new idea to design DES systems but also to exploit the potential application of ChB complexes.

Influence of donor point modifications on the assembly of chalcogen-bonded organic frameworks

Incremental, single-atom substitutions of Se-based chalcogen bond (Ch-bond) donors with stronger donating Te centers were implemented in two new triptycene tris(1,2,5-chalcogenadiazole) tectons. The appreciably more favorable Ch-bonding ability of the Te-based donors promotes assembly of low-density networks and more stable Ch-bonded organic frameworks (ChOFs).

An Unusual Macrocyclic Hexamer of an Iso-Tellurazole N-Oxide Featuring CTe… O Chalcogen Bonds is Formed by κ6 -O Complexation to Fe(II) and Ni(II)

Studies of the supramolecular chemistry of iso-tellurazole N-oxides have been confined to non-polar media until now. To overcome that limitation, an iso-tellurazole N-oxide was derivatized with a primary alcohol group; the compound is soluble in polar solvents and stable in acidic to neutral aqueous media. Nickel (II) and iron (II) form macrocyclic complexes with six molecules of that iso-tellurazole N-oxide in a hitherto not-observed macrocyclic arrangement defined by CTe⋅⋅⋅O chalcogen bonds and κ6 -O bound to the metal ion. This behaviour is in sharp contrast with the κn -Te (n=1,2,4) complexes formed by soft metal ions.

Recent advances in supramolecular fullerene chemistry

Fullerene chemistry has come a long way since 1990, when the first bulk production of C60 was reported. In the past decade, progress in supramolecular chemistry has opened some remarkable and previously unexpected opportunities regarding the selective (multiple) functionalization of fullerenes and their (self)assembly into larger structures and frameworks. The purpose of this review article is to provide a comprehensive overview of these recent developments. We describe how macrocycles and cages that bind strongly to C60 can be used to block undesired addition patterns and thus allow the selective preparation of single-isomer addition products. We also discuss how the emergence of highly shape-persistent macrocycles has opened opportunities for the study of photoactive fullerene dyads and triads as well as the preparation of mechanically interlocked compounds. The preparation of two- or three-dimensional fullerene materials is another research area that has seen remarkable progress over the past few years. Due to the rapidly decreasing price of C60 and C70, we believe that these achievements will translate into all fields where fullerenes have traditionally (third-generation solar cells) and more recently been applied (catalysis, spintronics).

Pd/RHA and Pd/BPA as Eco-Friendly Heterogeneous Catalysts: Microwave-Assisted C–S Cross-Coupling Reaction in DMF

First time, Pd-Rice Husk Ash (Pd/RHA) and Pd-Banana Peel Ash (Pd-BPA) were used as eco-friendly catalysts in the C–S cross-coupling reaction of 5-bromo-2,1,3-benzothiadiazole with various benzene thiols in DMF under microwave irradiation at 75 °C, 200 W (100 psi) for 15–25 min. These catalysts were produced from agro-industrial wastes, such as rice husk ash and banana peel ash. These can be recycled and reused up to five catalytic cycles without loss of catalytic efficiency.

Solid-State Assembly by Chelating Chalcogen Bonding in Quinodimethane Tetraesters Fused with a Chalcogenadiazole

In contrast to p-quinodimethane tetraesters, which undergo facile polymerization due to their diradical character, newly synthesized 1 and 2 consisting of a chalcogenadiazole fused to a p-naphthoquinodimethane tetraester are thermodynamically stable due to butterfly-shaped deformation. Such a folded molecular structure is also favorable for chalcogen bond (ChB) formation through intermolecular close contacts between a chalcogen atom (E: Se or S) and the oxygen atoms of ester groups in a crystal. The less-explored chelating-ChB through a C=O⋅⋅⋅E⋅⋅⋅O=C contact [Se⋅⋅⋅O: 2.94-3.37 Å] is the key supramolecular synthon for the formation of a one-dimensional rod-like assembly in a crystal, which is commonly observed in selenadiazole-tetraesters (1) with OMe, OEt, and OiPr groups. The formation of inclusion cavities between the rods shows that 1 could serve as solid-state host molecules for clathrate formation, as found in a hexane-solvated crystal. In contrast, thiadiazole-tetraesters (2) are less suitable for the formation of a rod-like assembly since the ChB involving S is less effective, and thus is overwhelmed by weak hydrogen bonds through C-H⋅⋅⋅O contacts.

Acene-Extended Triptycenes: Synthesis, Characterization, and Singlet Exciton Fission Properties

Three acene-extended triptycenes, TIPS-Antrip, TIPS-Tetrip, and TIPS-Pentrip, which contain TIPS-ethynyl functionalized anthracene, tetracene, and pentacene as subunits, respectively, are synthesized and characterized. It is found that the optoelectronic properties and crystal packing motifs could be modulated by changing the subunits. A preliminary exploration of the excited-state behavior of these molecules indicates that TIPS-Tetrip and TIPS-Pentrip exhibit intramolecular singlet fission (iSF).

Square tetravalent chalcogen bonds in dimeric aggregates: a joint crystallographic survey and theoretical study

Square tetravalent chalcogen bonds were systematically investigated through a combination of crystal structure analysis and DFT calculations.

Designing Tetraoxa[8]circulenes To Serve as Hosts and Sensors

In D₄-symmetric tetraoxa[8]circulenes, alternating fused benzene and furan rings form an octagonal array. These compounds are little known despite their novel properties, which include extended planar π-conjugation and a formally antiaromatic cyclooctatetraene core. Tetraoxa[8]circulenes can be formed by acid-induced cyclocondensations of suitable quinones, but existing methods often give very low yields. In addition, π-stacking of simple tetraoxa[8]circulenes reduces solubility and limits opportunities to form homogeneous mixtures or cocrystals with other compounds. To help make tetraoxa[8]circulenes more useful, we have developed better ways to synthesize them, and we have used these methods to produce awkwardly shaped derivatives with large concave electron-rich aromatic surfaces. These compounds crystallize to form open structures that can accommodate various guests, including C₆₀. Analysis of the structures shows that the cyclooctatetraene core of the hosts exhibits surprising variations in C-C bond lengths and conjugation, which appear to be related to the gain or loss of aromaticity. This allows tetraoxa[8]circulenes to serve as sensitive probes of local molecular environment and to be used as sensors of electron-deficient species such as nitroaromatic compounds.

Competing Effects of Chlorination on the Strength of Te⋅⋅⋅O Chalcogen Bonds Select the Structure of Mixed Supramolecular Macrocyclic Aggregates of Iso-Tellurazole N-Oxides

Chlorination of 3-methyl-5-phenyl-1,2-tellurazole-2-oxide yielded the λ⁴ Te dichloro derivative. Its crystal structure demonstrates that the heterocycle retains its ability to autoassociate by chalcogen bonding (ChB) forming macrocyclic tetramers. The corresponding Te⋅⋅⋅O ChB distances are 2.062 Å, the shortest observed to date in aggregates of this type. DFT-D3 calculations indicate that while the halogenated molecule is stronger as a ChB donor it also is a weaker ChB acceptor; the overall effect is that the ChBs in the chlorinated homotetramer are not significantly stronger. However, partial halogenation or scrambling selectively yield the 2 : 2 heterotetramer with alternating λ⁴ Te and λ² Te centers, which calculations identified as the thermodynamically preferred arrangement.

Effect of Aromatic System Expansion on Crystal Structures of 1,2,5-Thia- and 1,2,5-Selenadiazoles and Their Quaternary Salts: Synthesis, Structure, and Spectroscopic Properties

Rational manipulation of secondary bonding interactions is a crucial factor in the construction of new chalcogenadiazole-based materials. This article reports detailed experimental studies on phenanthro[9,10-c][1,2,5]chalcogenadiazolium and 2,1,3-benzochalcogenadiazolium salts and their precursors. The compounds were synthesized, characterized employing NMR and UV-Vis spectroscopy. TD-DFT calculations were also performed. The influence of the size of the aromatic system on the molecular motifs formed by the compounds in the solid state has been studied by means of single-crystal X-ray diffraction. In case of the salts, the nature of an anion was also taken into consideration. The results show that cyclic [E···N]2 supramolecular synthon connects neighboring molecules of phenanthro[9,10-c][1,2,5]chalcogenadiazoles, with a relatively large aromatic system, in dimers regardless of the chalcogen atom in the molecule. Both N-methyl-2,1,3-benzothiadiazolium and N-methylphenanthro[9,10-c][1,2,5]chalcogenadiazolium cations have a strong affinity for triflate and iodide anions, therefore the formation of S···N or Se···N secondary bonding interactions is observed only in two out of the eight quaternary salts. Less coordinating anions must be used to enable the building blocks studied to form cyclic [E···N]2 synthons. Moreover, for two of the triflate salts, which are isostructural, a new supramolecular motif has been observed.

When the strategies for cellular selectivity fail. Challenges and surprises in the design and application of fluorescent benzothiadiazole derivatives for mitochondrial staining

Design, synthesis, molecular architecture and the unexpected behavior of fluorescent benzothiadiazole for selective mitochondrial and plasma membrane staining are investigated.

2Ch–2N square and hexagon interactions: a combined crystallographic data analysis and computational study

2Ch–2N square and hexagon interactions were extensively investigated by the combination of crystallographic data analysis and computational approaches.

Synthetic and structural investigations of bis(N-alkyl-benzoselenadiazolium) cations

A variety of supramolecular structures is formed by selenadiazolium cations linked by hydrocarbon bridges.

Macrocyclic complexes of Pt(ii) and Rh(iii) with iso-tellurazole N-oxides

Tetramers of iso-tellurazole N-oxides form stable macrocyclic complexes with Pt(ii) and Rh(iii) in solution.

Chalcogen Bonding "2S-2N Squares" versus Competing Interactions: Exploring the Recognition Properties of Sulfur

Chalcogen bonding (CB) is the focus of increased attention for its applications in medicinal chemistry, materials science, and crystal engineering. However, the origin of sulfur's recognition properties remains controversial, and experimental evidence for supporting theories is still emerging. Here, a comprehensive evaluation of sulfur CB interactions is presented by investigating 2,1,3-benzothiadiazole X-ray crystallographic structures gathered from the Cambridge Structure Database (CSD), Protein Data Bank (PDB), and own laboratory findings. Through the systematic analysis of substituent effects on a subset library of over thirty benzothiadiazole derivatives, the competing interactions have been categorized into four main classes, namely 2S-2N CB square, halogen bonding (XB), S⋅⋅⋅S, and hydrogen-bonding (HB). A geometric model is employed to characterize the 2S-2N CB square motifs and discuss the role of electrostatic, dipole, and orbital contributions toward the interaction.

Titanocene-Mediated Dinitrile Coupling: A Divergent Route to Nitrogen-Containing Polycyclic Aromatic Hydrocarbons

A general synthetic strategy for the construction of large, nitrogen-containing polycyclic aromatic hydrocarbons (PAHs) is reported. The strategy involves two key steps: (1) a titanocene-mediated reductive cyclization of an oligo(dinitrile) precursor to form a PAH appended with di(aza)titanacyclopentadiene functionality; (2) a divergent titanocene transfer reaction, which allows final-step installation of one or more o-quinone, diazole, or pyrazine units into the PAH framework. The new methodology enables rational, late-stage control of HOMO and LUMO energy levels and thus photophysical and electrochemical properties, as revealed by UV/vis and fluorescence spectroscopy, cyclic voltammetry, and DFT calculations. More generally, this contribution presents the first productive use of di(aza)metallacyclopentadiene intermediates in organic synthesis, including the first formal [2 + 2 + 2] reaction to form a pyrazine ring.

Sigma-hole interactions in the molecular and crystal structures of N-boryl benzo-2,1,3-selenadiazoles

Crystallography and DFT reveal competition between chalcogen bonding and other intermolecular interactions.

Synthesis of Salts of 1,2,5,6- and 1,4,5,8-Naphthalenetetramine

1,2,5,6-Naphthalenetetramine (1a), its 1,4,5,8-isomer (2a), and their salts are valuable precursors for synthesizing nitrogen-containing arenes and other targets of interest. We describe how salts of tetramines 1a and 2a can be made from simple protected derivatives of 1,5-naphthalenediamine (2d) by sequences of regioselective dinitration, deprotection, and reduction. Various shortcomings of previously reported syntheses of tetramines 1a and 2a can thereby be avoided. In addition, we report structural studies that may help clarify the mechanism of nitration and resolve an earlier controversy about the regioselectivity observed in nitrations of derivatives of 1,5-naphthalenediamine (2d).