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Luesch H, Ellis EK, Chen QY, Ratnayake R. Progress in the discovery and development of anticancer agents from marine cyanobacteria. Nat Prod Rep 2025; 42:208-256. [PMID: 39620500 PMCID: PMC11610234 DOI: 10.1039/d4np00019f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2024] [Indexed: 12/11/2024]
Abstract
Covering 2010-April 2024There have been tremendous new discoveries and developments since 2010 in anticancer research based on marine cyanobacteria. Marine cyanobacteria are prolific sources of anticancer natural products, including the tubulin agents dolastatins 10 and 15 which were originally isolated from a mollusk that feeds on cyanobacteria. Decades of research have culminated in the approval of six antibody-drug conjugates (ADCs) and many ongoing clinical trials. Antibody conjugation has been enabling for several natural products, particularly cyanobacterial cytotoxins. Targeting tubulin dynamics has been a major strategy, leading to the discovery of the gatorbulin scaffold, acting on a new pharmacological site. Cyanobacterial compounds with different mechanisms of action (MOA), targeting novel or validated targets in a range of organelles, also show promise as anticancer agents. Important advances include the development of compounds with novel MOA, including apratoxin and coibamide A analogues, modulating cotranslational translocation at the level of Sec61 in the endoplasmic reticulum, largazole and santacruzamate A targeting class I histone deacetylases, and proteasome inhibitors based on carmaphycins, resembling the approved drug carfilzomib. The pipeline extends with SERCA inhibitors, mitochondrial cytotoxins and membrane-targeting agents, which have not yet advanced clinically since the biology is less understood and selectivity concerns remain to be addressed. In addition, efforts have also focused on the identification of chemosensitizing and antimetastatic agents. The review covers the state of current knowledge of marine cyanobacteria as anticancer agents with a focus on the mechanism, target identification and potential for drug development. We highlight the importance of solving the supply problem through chemical synthesis as well as illuminating the biological activity and in-depth mechanistic studies to increase the value of cyanobacterial natural products to catalyze their development.
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Affiliation(s)
- Hendrik Luesch
- Department of Medicinal Chemistry and Center for Natural Products, Drug Discovery and Development (CNPD3), University of Florida, 1345 Center Drive, Gainesville, Florida 32610, USA.
- Program in Cancer and Stem Cell Biology, Duke-NUS Medical School, Singapore, 169857, Singapore
| | - Emma K Ellis
- Department of Medicinal Chemistry and Center for Natural Products, Drug Discovery and Development (CNPD3), University of Florida, 1345 Center Drive, Gainesville, Florida 32610, USA.
| | - Qi-Yin Chen
- Department of Medicinal Chemistry and Center for Natural Products, Drug Discovery and Development (CNPD3), University of Florida, 1345 Center Drive, Gainesville, Florida 32610, USA.
| | - Ranjala Ratnayake
- Department of Medicinal Chemistry and Center for Natural Products, Drug Discovery and Development (CNPD3), University of Florida, 1345 Center Drive, Gainesville, Florida 32610, USA.
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2
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Buchanan D, Mori S, Chadli A, Panda SS. Natural Cyclic Peptides: Synthetic Strategies and Biomedical Applications. Biomedicines 2025; 13:240. [PMID: 39857823 PMCID: PMC11763372 DOI: 10.3390/biomedicines13010240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2024] [Revised: 01/12/2025] [Accepted: 01/13/2025] [Indexed: 01/27/2025] Open
Abstract
Natural cyclic peptides, a diverse class of bioactive compounds, have been isolated from various natural sources and are renowned for their extensive structural variability and broad spectrum of medicinal properties. Over 40 cyclic peptides or their derivatives are currently approved as medicines, underscoring their significant therapeutic potential. These compounds are employed in diverse roles, including antibiotics, antifungals, antiparasitics, immune modulators, and anti-inflammatory agents. Their unique ability to combine high specificity with desirable pharmacokinetic properties makes them valuable tools in addressing unmet medical needs, such as combating drug-resistant pathogens and targeting challenging biological pathways. Due to the typically low concentrations of cyclic peptides in nature, effective synthetic strategies are indispensable for their acquisition, characterization, and biological evaluation. Cyclization, a critical step in their synthesis, enhances metabolic stability, bioavailability, and receptor binding affinity. Advances in synthetic methodologies-such as solid-phase peptide synthesis (SPPS), chemoenzymatic approaches, and orthogonal protection strategies-have transformed cyclic peptide production, enabling greater structural complexity and precision. This review compiles recent progress in the total synthesis and biological evaluation of natural cyclic peptides from 2017 onward, categorized by cyclization strategies: head-to-tail; head-to-side-chain; tail-to-side-chain; and side-chain-to-side-chain strategies. Each account includes retrosynthetic analyses, synthetic advancements, and biological data to illustrate their therapeutic relevance and innovative methodologies. Looking ahead, the future of cyclic peptides in drug discovery is bright. Emerging trends, including integrating computational tools for rational design, novel cyclization techniques to improve pharmacokinetic profiles, and interdisciplinary collaboration among chemists, biologists, and computational scientists, promise to expand the scope of cyclic peptide-based therapeutics. These advancements can potentially address complex diseases and advance the broader field of biological drug development.
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Affiliation(s)
- Devan Buchanan
- Department of Chemistry and Biochemistry, Augusta University, Augusta, GA 30912, USA; (D.B.); (S.M.)
- Georgia Cancer Center, Augusta University, Augusta, GA 30912, USA;
| | - Shogo Mori
- Department of Chemistry and Biochemistry, Augusta University, Augusta, GA 30912, USA; (D.B.); (S.M.)
| | - Ahmed Chadli
- Georgia Cancer Center, Augusta University, Augusta, GA 30912, USA;
| | - Siva S. Panda
- Department of Chemistry and Biochemistry, Augusta University, Augusta, GA 30912, USA; (D.B.); (S.M.)
- Department of Biochemistry and Molecular Biology, Augusta University, Augusta, GA 30912, USA
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3
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Ali R, Ahmed W, Jayant V, alvi S, Ahmed N, Ahmed A. Metathesis reactions in total‐ and natural product fragments syntheses. ASIAN J ORG CHEM 2022. [DOI: 10.1002/ajoc.202100753] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Rashid Ali
- Jamia Millia Islamia New Delhi India 110025 Department of Chemistry Jamia Nagar,New Delhi india110025 110025 New Delhi INDIA
| | - Waqar Ahmed
- Jamia Millia Islamia Central University: Jamia Millia Islamia Chemistry INDIA
| | - Vikrant Jayant
- Jamia Millia Islamia Central University: Jamia Millia Islamia Chemistry INDIA
| | - shakeel alvi
- Jamia Millia Islamia Central University: Jamia Millia Islamia Chemistry INDIA
| | - Nadeem Ahmed
- Jamia Millia Islamia Central University: Jamia Millia Islamia Chemistry INDIA
| | - Azeem Ahmed
- Jamia Millia Islamia Central University: Jamia Millia Islamia Chemistry INDIA
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4
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Andler O, Kazmaier U. Total synthesis of apratoxin A and B using Matteson's homologation approach. Org Biomol Chem 2021; 19:4866-4870. [PMID: 33998628 DOI: 10.1039/d1ob00713k] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Apratoxin A and B, two members of an interesting class of marine cyclodepsipeptides are synthesized in a straightforward manner via Matteson homologation. Starting from a chiral boronic ester, the polyketide fragment of the apratoxins was obtained via five successive homologation steps in an overall yield of 27% and very good diastereoselectivity. This approach is highly flexible and should allow modification also of this part of the natural products, while previous modifications have been carried out mainly in the peptide fragment.
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Affiliation(s)
- Oliver Andler
- Organic Chemistry, Saarland University, P.O. Box 151150, 66041 Saarbrücken, Germany.
| | - Uli Kazmaier
- Organic Chemistry, Saarland University, P.O. Box 151150, 66041 Saarbrücken, Germany.
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5
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Matulja D, Wittine K, Malatesti N, Laclef S, Turks M, Markovic MK, Ambrožić G, Marković D. Marine Natural Products with High Anticancer Activities. Curr Med Chem 2020; 27:1243-1307. [PMID: 31931690 DOI: 10.2174/0929867327666200113154115] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 12/03/2019] [Accepted: 12/15/2019] [Indexed: 12/13/2022]
Abstract
This review covers recent literature from 2012-2019 concerning 170 marine natural products and their semisynthetic analogues with strong anticancer biological activities. Reports that shed light on cellular and molecular mechanisms and biological functions of these compounds, thus advancing the understanding in cancer biology are also included. Biosynthetic studies and total syntheses, which have provided access to derivatives and have contributed to the proper structure or stereochemistry elucidation or revision are mentioned. The natural compounds isolated from marine organisms are divided into nine groups, namely: alkaloids, sterols and steroids, glycosides, terpenes and terpenoids, macrolides, polypeptides, quinones, phenols and polyphenols, and miscellaneous products. An emphasis is placed on several drugs originating from marine natural products that have already been marketed or are currently in clinical trials.
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Affiliation(s)
- Dario Matulja
- Department of Biotechnology, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
| | - Karlo Wittine
- Department of Biotechnology, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
| | - Nela Malatesti
- Department of Biotechnology, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
| | - Sylvain Laclef
- Laboratoire de Glycochimie, des Antimicrobiens et des Agro-ressources (LG2A), CNRS FRE 3517, 33 rue Saint-Leu, 80039 Amiens, France
| | - Maris Turks
- Faculty of Material Science and Applied Chemistry, Riga Technical University, P. Valdena Str. 3, Riga, LV-1007, Latvia
| | - Maria Kolympadi Markovic
- Department of Physics, and Center for Micro- and Nanosciences and Technologies, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
| | - Gabriela Ambrožić
- Department of Physics, and Center for Micro- and Nanosciences and Technologies, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
| | - Dean Marković
- Department of Biotechnology, University of Rijeka, Radmile Matejcic 2, 51000 Rijeka, Croatia
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Nie XD, Mao ZY, Zhou W, Si CM, Wei BG, Lin GQ. A diastereoselective approach to amino alcohols and application for divergent synthesis of dolastatin 10. Org Chem Front 2020. [DOI: 10.1039/c9qo01292c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A diastereoselective approach to obtain amino alcohols through SmI2-induced radical addition and divergent synthesis of dolastatin 10 are described.
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Affiliation(s)
- Xiao-Di Nie
- Institutes of Biomedical Sciences and School of Pharmacy
- Fudan University
- Shanghai
- China
| | - Zhuo-Ya Mao
- Institutes of Biomedical Sciences and School of Pharmacy
- Fudan University
- Shanghai
- China
| | - Wen Zhou
- Institutes of Biomedical Sciences and School of Pharmacy
- Fudan University
- Shanghai
- China
| | - Chang-Mei Si
- Institutes of Biomedical Sciences and School of Pharmacy
- Fudan University
- Shanghai
- China
| | - Bang-Guo Wei
- Institutes of Biomedical Sciences and School of Pharmacy
- Fudan University
- Shanghai
- China
| | - Guo-Qiang Lin
- Shanghai Institute of Organic Chemistry
- Chinese Academy of Sciences
- Shanghai 200032
- China
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7
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Han P, Mao ZY, Si CM, Zhou Z, Wei BG, Lin GQ. Stereoselective Synthesis of Pyrido- and Pyrrolo[1,2-c][1,3]oxazin-1-ones via a Nucleophilic Addition–Cyclization Process of N,O-Acetal with Ynamides. J Org Chem 2018; 84:914-923. [DOI: 10.1021/acs.joc.8b02795] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Pan Han
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Zhuo-Ya Mao
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Chang-Mei Si
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Zhu Zhou
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Bang-Guo Wei
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Guo-Qiang Lin
- School of Pharmacy and Institutes of Biomedical Sciences, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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8
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2017. Coord Chem Rev 2018. [DOI: 10.1016/j.ccr.2018.08.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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9
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Zhang HL, Sun ZF, Zhou LN, Liu L, Zhang T, Du ZT. Synthesis of the Sex Pheromone of the Tea Tussock Moth Based on a Resource Chemistry Strategy. Molecules 2018; 23:molecules23061347. [PMID: 29867014 PMCID: PMC6100017 DOI: 10.3390/molecules23061347] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Revised: 05/30/2018] [Accepted: 06/03/2018] [Indexed: 02/07/2023] Open
Abstract
Synthesis of the sex pheromone of the tea tussock moth in 33% overall yield over 10 steps was achieved. Moreover, the chiral pool concept was applied in the asymmetric synthesis. The synthesis used a chemical available on a large-scale from recycling of wastewater from the steroid industry. The carbon skeleton was constructed using the C4+C5+C8 strategy. Based on this strategy, the original chiral center was totally retained.
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Affiliation(s)
- Hong-Li Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling 712100, China.
| | - Zhi-Feng Sun
- Shaanxi Key Laboratory for Catalysis, College of Chemical and Environment Science, Shaanxi University of Technology, Hanzhong 723001, China.
- College of Chemistry and Pharmacy, Northwest A&F University, Yangling 712100, China.
| | - Lu-Nan Zhou
- College of Chemistry and Pharmacy, Northwest A&F University, Yangling 712100, China.
| | - Lu Liu
- College of Chemistry and Pharmacy, Northwest A&F University, Yangling 712100, China.
| | - Tao Zhang
- College of Chemistry and Pharmacy, Northwest A&F University, Yangling 712100, China.
| | - Zhen-Ting Du
- College of Chemistry and Pharmacy, Northwest A&F University, Yangling 712100, China.
- Key Laboratory of Botanical Pesticide R&D in Shaanxi Province, Yangling 712100, China.
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10
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Tiara K, Potopnyk MA, Jarosz S. Synthesis of a sucrose-based macrocycle with unsymmetrical monosaccharides "arms". Beilstein J Org Chem 2018; 14:634-641. [PMID: 29623125 PMCID: PMC5870162 DOI: 10.3762/bjoc.14.50] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Accepted: 02/21/2018] [Indexed: 12/18/2022] Open
Abstract
An efficient methodology for the selective substitution of both terminal positions (C6 and C6’) in 1’,2,3,3’,4,4’-hexa-O-benzylsucrose with different unsaturated monosaccharide units is presented. Such a highly functionalized intermediate was cyclized under RCM conditions to afford a macrocyclic derivative containing a 31-membered ring in 26% yield.
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Affiliation(s)
- Karolina Tiara
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Mykhaylo A Potopnyk
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Sławomir Jarosz
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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11
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Diastereoselective approach to trans -5-hydroxy-6-substitutedethanone-2-piperidinones: Scalable syntheses of (+)-febrifugine and (+)-halofuginone. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.03.022] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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12
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Liu YW, Ma RJ, Yan JH, Zhou Z, Wei BG. Asymmetric synthesis of (-)-sedacryptine through a diastereoselective Mannich reaction of N,O-acetals with ketones. Org Biomol Chem 2018; 16:771-779. [PMID: 29319096 DOI: 10.1039/c7ob02989f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An efficient diastereoselective approach to access the 3-hydroxy-2,6-disubstituted piperidine scaffold 1 has been developed through the Mannich process involving N,O-acetal (2S,3R)-6 and ketones in excellent yield with high diastereoselectivity (dr > 99 : 1). In addition, the utility of this convenient one-pot process is demonstrated by the asymmetric synthesis of (-)-sedacryptine 3.
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Affiliation(s)
- Yi-Wen Liu
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 130 Dongan Road, Shanghai, 200032, China.
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13
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Mao ZY, Liu YW, Han P, Dong HQ, Si CM, Wei BG, Lin GQ. Regio- and Stereoselective Cascades via Aldol Condensation and 1,3-Dipolar Cycloaddition for Construction of Functional Pyrrolizidine Derivatives. Org Lett 2018; 20:1090-1093. [DOI: 10.1021/acs.orglett.7b04056] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Zhuo-Ya Mao
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Yi-Wen Liu
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Pan Han
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Han-Qing Dong
- Shanghai
Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Chang-Mei Si
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Bang-Guo Wei
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Guo-Qiang Lin
- Department
of Natural Products Chemistry, School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
- Shanghai
Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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14
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Han P, Zhou Z, Si CM, Sha XY, Gu ZY, Wei BG, Lin GQ. Asymmetric Synthesis of Rupestonic Acid and Pechueloic Acid. Org Lett 2017; 19:6732-6735. [PMID: 29211481 DOI: 10.1021/acs.orglett.7b03459] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
In this report, the originally proposed rupestonic acid (5) and pechueloic acid (3) were efficiently synthesized. The chiral lactone 13, recycled from the degradation of saponin glycosides, was utilized to prepare the key chiral fragment 11. During the exploration of this convergent assembly strategy, the ring-closing metathesis (RCM), SmI2-prompted intermolecular addition, and [2,3]-Wittig rearrangement proved to be effective transformations for the synthesis of subunits.
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Affiliation(s)
- Pan Han
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
| | - Zhu Zhou
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
| | - Chang-Mei Si
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
| | - Xian-Yi Sha
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
| | - Zheng-Yi Gu
- Xinjiang Institute of Materia Medica , Lane 140, South Xinhua Road, Urumqi, Xinjiang 830004, China
| | - Bang-Guo Wei
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
| | - Guo-Qiang Lin
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University , 220 Handan Road, Shanghai 200433, China
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