1
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Sohora M, Sović I, Spahić Z, Kontrec D, Jurin M. Photochemistry of phthalimidoadamantane dipeptides: effect of amino acid side chain on photocyclization. Photochem Photobiol Sci 2023; 22:2071-2080. [PMID: 37148465 DOI: 10.1007/s43630-023-00430-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Accepted: 04/26/2023] [Indexed: 05/08/2023]
Abstract
A series of dipeptides 1 was synthesized that at the N-site contained 3-(N-phthalimidoadamantane-1-carboxylic acid and at the C-site different aliphatic or aromatic L- or D-amino acids. The photochemical reaction of dipeptides 1 under acetone-sensitized conditions gave simple decarboxylation products 6, and decarboxylation-induced cyclization products 7, as well as some secondary products 8 and 9 formed by elimination of H2O or ring enlargement, respectively. Molecules 9 undergo secondary photoinduced H-abstractions by the phthalimide chromophore, delivering more complex polycycles 11. The photodecarboxylation-induced cyclization to 7 was observed only with phenylalanine (Phe), proline (Pro), leucine (Leu) and isoleucine (Ile). Contrary to dipeptides with Phe, the cyclization takes place with almost complete racemization at the amino acid chiral center, but diastereoselectively giving only one pair of enantiomers. The conducted investigation is important as it provides the breath and the scope of dipeptide cyclizations activated by phthalimides.
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Affiliation(s)
- Margareta Sohora
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička Cesta 54, 10000, Zagreb, Croatia.
| | - Irena Sović
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička Cesta 54, 10000, Zagreb, Croatia
- Selvita Ltd., Prilaz Baruna Filipovića 29, 10000, Zagreb, Croatia
| | - Zlatan Spahić
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička Cesta 54, 10000, Zagreb, Croatia
- Faculty of Science, University of Zagreb, Horvatovac 102 A, 10000, Zagreb, Croatia
| | - Darko Kontrec
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička Cesta 54, 10000, Zagreb, Croatia
| | - Mladenka Jurin
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička Cesta 54, 10000, Zagreb, Croatia
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2
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Kelbysheva ES, Strelkova TV, Ezernitskaya MG, Alekseev VG, Telegina LN. Synthesis, Spectral and Electrochemical Properties, and Computational Modeling of N‐Cymantrenylmethylphthalimide. ChemistrySelect 2023. [DOI: 10.1002/slct.202204162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
Affiliation(s)
- Elena S. Kelbysheva
- A.N. Nesmeyanov Institute of Organoelement Compounds RussianAcademy of Sciences Vavilova 28 Moscow 119991 Russia
| | - Tatyana V. Strelkova
- A.N. Nesmeyanov Institute of Organoelement Compounds RussianAcademy of Sciences Vavilova 28 Moscow 119991 Russia
| | - Mariam G. Ezernitskaya
- A.N. Nesmeyanov Institute of Organoelement Compounds RussianAcademy of Sciences Vavilova 28 Moscow 119991 Russia
| | - Vladimir G. Alekseev
- TverStateUniversity Faculty of Chemistry and Technology Zhelyabova 33 Tver 170100 Russia
| | - Lyudmila N. Telegina
- A.N. Nesmeyanov Institute of Organoelement Compounds RussianAcademy of Sciences Vavilova 28 Moscow 119991 Russia
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3
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Wang M, Yu BB, Yao ZJ. Simplified hybrids of two anticancer bistetrahydroisoquinoline alkaloids ecteinascidin 743 and cribrostatin 4 and inhibitory activity against proliferation of cancer cells. Org Biomol Chem 2022; 20:8438-8442. [DOI: 10.1039/d2ob01707e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
A series of simplified hybrids/analogues of natural alkaloids ecteinascidin 743 and cribrostatin 4 have been synthesized and evaluated.
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Affiliation(s)
- Min Wang
- State Key Laboratory of Coordination Chemistry, and Jiangsu Key Laboratory of Advanced Organic Materials School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing, Jiangsu 210023, China
| | - Bao-Bao Yu
- State Key Laboratory of Coordination Chemistry, and Jiangsu Key Laboratory of Advanced Organic Materials School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing, Jiangsu 210023, China
| | - Zhu-Jun Yao
- State Key Laboratory of Coordination Chemistry, and Jiangsu Key Laboratory of Advanced Organic Materials School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing, Jiangsu 210023, China
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4
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Wu Y, Lv B, Zhang Y, Gao P, Zhang M, Yuan Y. Ring opening of N-hydroxyphthalimide to construct phenylurea derivatives. SYNTHETIC COMMUN 2021. [DOI: 10.1080/00397911.2021.1919709] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Yinhui Wu
- School of Chemistry and Chemical Engineering, Yangzhou University, Yangzhou, China
| | - Bin Lv
- School of Chemistry and Chemical Engineering, Yangzhou University, Yangzhou, China
| | - Yanan Zhang
- School of Chemistry and Chemical Engineering, Yangzhou University, Yangzhou, China
| | - Pan Gao
- School of Chemistry and Chemical Engineering, Yangzhou University, Yangzhou, China
| | - Min Zhang
- Affiliated Hospital of Yangzhou University, Yangzhou, China
| | - Yu Yuan
- School of Chemistry and Chemical Engineering, Yangzhou University, Yangzhou, China
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5
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The effect of the rate of photoinduced electron transfer on the photodecarboxylation efficiency in phthalimide photochemistry. J Photochem Photobiol A Chem 2021. [DOI: 10.1016/j.jphotochem.2020.113109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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6
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Raynal L, Rose NC, Donald JR, Spicer CD. Photochemical Methods for Peptide Macrocyclisation. Chemistry 2021; 27:69-88. [PMID: 32914455 PMCID: PMC7821122 DOI: 10.1002/chem.202003779] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Revised: 09/10/2020] [Indexed: 12/19/2022]
Abstract
Photochemical reactions have been the subject of renewed interest over the last two decades, leading to the development of many new, diverse and powerful chemical transformations. More recently, these developments have been expanded to enable the photochemical macrocyclisation of peptides and small proteins. These constructs benefit from increased stability, structural rigidity and biological potency over their linear counterparts, providing opportunities for improved therapeutic agents. In this review, an overview of both the established and emerging methods for photochemical peptide macrocyclisation is presented, highlighting both the limitations and opportunities for further innovation in the field.
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Affiliation(s)
- Laetitia Raynal
- Department of ChemistryUniversity of YorkHeslingtonYorkYO10 5DDUK
| | - Nicholas C. Rose
- Department of ChemistryUniversity of YorkHeslingtonYorkYO10 5DDUK
| | - James R. Donald
- Department of ChemistryUniversity of YorkHeslingtonYorkYO10 5DDUK
- York Biomedical Research InstituteUniversity of YorkHeslingtonYorkYO10 5DDUK
| | - Christopher D. Spicer
- Department of ChemistryUniversity of YorkHeslingtonYorkYO10 5DDUK
- York Biomedical Research InstituteUniversity of YorkHeslingtonYorkYO10 5DDUK
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7
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Sohora M, Mandić L, Basarić N. [3 + 2] Cycloaddition with photogenerated azomethine ylides in β-cyclodextrin. Beilstein J Org Chem 2020; 16:1296-1304. [PMID: 32566032 PMCID: PMC7296198 DOI: 10.3762/bjoc.16.110] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Accepted: 05/28/2020] [Indexed: 11/23/2022] Open
Abstract
Stability constants for the inclusion complexes of cyclohexylphthalimide 2 and adamantylphthalimide 3 with β-cyclodextrin (β-CD) were determined by 1H NMR titration, K = 190 ± 50 M-1, and K = 2600 ± 600 M-1, respectively. Photochemical reactivity of the inclusion complexes 2@β-CD and 3@β-CD was investigated, and we found out that β-CD does not affect the decarboxylation efficiency, while it affects the subsequent photochemical H-abstraction, resulting in different product distribution upon irradiation in the presence of β-CD. The formation of ternary complexes with acrylonitrile (AN) and 2@β-CD or 3@β-CD was also essayed by 1H NMR. Although the formation of such complexes was suggested, stability constants could not be determined. Irradiation of 2@β-CD in the presence of AN in aqueous solution where cycloadduct 7 was formed highly suggests that decarboxylation and [3 + 2] cycloaddition take place in the ternary complex, whereas such a reactivity from bulky adamantane 3 is less likely. This proof of principle that decarboxylation and cycloaddition can be performed in the β-CD cavity has a significant importance for the design of new supramolecular systems for the control of photoreactivity.
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Affiliation(s)
- Margareta Sohora
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička cesta 54, 10 000 Zagreb, Croatia. Fax: +385 1 4680 195; Tel: +385 12 4561 141
| | - Leo Mandić
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička cesta 54, 10 000 Zagreb, Croatia. Fax: +385 1 4680 195; Tel: +385 12 4561 141
- Department of Material Chemistry, Ruđer Bošković Institute, Bijenička cesta 54, 10 000 Zagreb, Croatia
| | - Nikola Basarić
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička cesta 54, 10 000 Zagreb, Croatia. Fax: +385 1 4680 195; Tel: +385 12 4561 141
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8
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Mandić L, Džeba I, Jadreško D, Mihaljević B, Biczók L, Basarić N. Photophysical properties and electron transfer photochemical reactivity of substituted phthalimides. NEW J CHEM 2020. [DOI: 10.1039/d0nj03465g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Substituents on phthalimide affect its photophysics and photochemical reactivity. Electron donors generally result in low quantum yields of intersystem crossing and reactivity from singlet excited states.
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Affiliation(s)
- Leo Mandić
- Department of Organic Chemistry and Biochemistry
- Ruđer Bošković Institute
- 10000 Zagreb
- Croatia
- Department of Material Chemistry
| | - Iva Džeba
- Department of Material Chemistry
- Ruđer Bošković Institute
- 10000 Zagreb
- Croatia
| | - Dijana Jadreško
- Division for Marine and Environmental Research
- Ruđer Bošković Institute
- 10000 Zagreb
- Croatia
| | - Branka Mihaljević
- Department of Material Chemistry
- Ruđer Bošković Institute
- 10000 Zagreb
- Croatia
| | - László Biczók
- Institute of Materials and Environmental Chemistry
- Research Centre for Natural Sciences
- 1519 Budapest
- Hungary
| | - Nikola Basarić
- Department of Organic Chemistry and Biochemistry
- Ruđer Bošković Institute
- 10000 Zagreb
- Croatia
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9
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Oliva F, Bucci R, Tamborini L, Pieraccini S, Pinto A, Pellegrino S. Bicyclic Pyrrolidine-Isoxazoline γ Amino Acid: A Constrained Scaffold for Stabilizing α-Turn Conformation in Isolated Peptides. Front Chem 2019; 7:133. [PMID: 30937302 PMCID: PMC6431668 DOI: 10.3389/fchem.2019.00133] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Accepted: 02/20/2019] [Indexed: 12/22/2022] Open
Abstract
Unnatural amino acids have tremendously expanded the folding possibilities of peptides and peptide mimics. While α,α-disubstituted and β-amino acids are widely studied, γ-derivatives have been less exploited. Here we report the conformational study on the bicyclic unnatural γ amino acid, 4,5,6,6a-tetrahydro-3aH-pyrrolo[3,4-d]isoxazole-3-carboxylic acid 1. In model peptides, the (+)-(3aR6aS)-enantiomer is able to stabilize α-turn conformation when associated to glycine, as showed by 1H-NMR, FT-IR, and circular dichroism experiments, and molecular modeling studies. α-turn is a structural motif occurring in many biologically active protein sites, although its stabilization on isolated peptides is quite uncommon. Our results make the unnatural γ-amino acid 1 of particular interest for the development of bioactive peptidomimetics.
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Affiliation(s)
| | - Raffaella Bucci
- Department of Pharmaceutical Sciences, University of Milan, Milan, Italy
| | - Lucia Tamborini
- Department of Pharmaceutical Sciences, University of Milan, Milan, Italy
| | | | - Andrea Pinto
- Department of Food, Environmental and Nutritional Sciences, University of Milan, Milan, Italy
| | - Sara Pellegrino
- Department of Pharmaceutical Sciences, University of Milan, Milan, Italy
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