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Gao P, Rahman MM, Zamalloa A, Feliciano J, Szostak M. Classes of Amides that Undergo Selective N-C Amide Bond Activation: The Emergence of Ground-State Destabilization. J Org Chem 2023; 88:13371-13391. [PMID: 36054817 DOI: 10.1021/acs.joc.2c01094] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Ground-state destabilization of the N-C(O) linkage represents a powerful tool to functionalize the historically inert amide bond. This burgeoning reaction manifold relies on the availability of amide bond precursors that participate in weakening of the nN → π*C=O conjugation through N-C twisting, N pyramidalization, and nN electronic delocalization. Since 2015, acyl N-C amide bond activation through ground-state destabilization of the amide bond has been achieved by transition-metal-catalyzed oxidative addition of the N-C(O) bond, generation of acyl radicals, and transition-metal-free acyl addition. This Perspective summarizes contributions of our laboratory in the development of new ground-state-destabilized amide precursors enabled by twist and electronic activation of the amide bond and synthetic utility of ground-state-destabilized amides in cross-coupling reactions and acyl addition reactions. The use of ground-state-destabilized amides as electrophiles enables a plethora of previously unknown transformations of the amide bond, such as acyl coupling, decarbonylative coupling, radical coupling, and transition-metal-free coupling to forge new C-C, C-N, C-O, C-S, C-P, and C-B bonds. Structural studies of activated amides and catalytic systems developed in the past decade enable the view of the amide bond to change from the "traditionally inert" to "readily modifiable" functional group with a continuum of reactivity dictated by ground-state destabilization.
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Affiliation(s)
- Pengcheng Gao
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Md Mahbubur Rahman
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Alfredo Zamalloa
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Jessica Feliciano
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Michal Szostak
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
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Gazizov AS, Smolobochkin AV, Rizbayeva TS, Vatsadze SZ, Burilov AR, Sinyashin OG, Alabugin IV. "Stereoelectronic Deprotection of Nitrogen": Recovering Nucleophilicity with a Conformational Change. J Org Chem 2023. [PMID: 37216317 DOI: 10.1021/acs.joc.3c00161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Ureas are often thought of as "double amides" due to the obvious structural similarity of these functional groups. The main structural feature of an amide is its planarity, which is responsible for the conjugation between the nitrogen atom and carbonyl moiety and the decrease of amide nucleophilicity. Consequently, since amides are poor nucleophiles, ureas are often thought of as poor nucleophiles as well. Herein, we demonstrate that ureas can be distinctly different from amides. These differences can be amplified by rotation around one of the ureas' C-N bonds, which switches off the amide resonance and recovers the nucleophilicity of one of the nitrogen atoms. This conformational change can be further facilitated by the judicious introduction of steric bulk to disfavor the planar conformation. This change in reactivity is an example of "stereoelectronic deprotection," a concept when the desired reactivity of a functional group is produced by a conformational change rather than a chemical modification. This concept may be used complementarily to the traditional protecting groups. We also demonstrate both the viability and the utility of this concept by the synthesis of unusual 2-oxoimidazolium salts possessing quaternary nitrogen atoms at the urea moiety.
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Affiliation(s)
- Almir S Gazizov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
| | - Andrey V Smolobochkin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
| | - Tanzilya S Rizbayeva
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
| | - Sergey Z Vatsadze
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., Moscow 119991, Russian Federation
| | - Alexander R Burilov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
| | - Oleg G Sinyashin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
| | - Igor V Alabugin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Science, Arbuzova Str., 8, Kazan 420088, Russian Federation
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee Fl 32306, United States
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Liu C, Szostak M. Amide N-C Bond Activation: A Graphical Overview of Acyl and Decarbonylative Coupling. SYNOPEN 2023; 7:88-101. [PMID: 38037650 PMCID: PMC10686541 DOI: 10.1055/a-2035-6733] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023] Open
Abstract
This Graphical Review provides an overview of amide bond activation achieved by selective oxidative addition of the N-C(O) acyl bond to transition metals and nucleophilic acyl addition, resulting in acyl and decarbonylative coupling together with key mechanistic details pertaining to amide bond distortion underlying this reactivity manifold.
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Affiliation(s)
- Chengwei Liu
- Department of Chemistry, Shanghai University, 99 Shangda Road, Shanghai 200444, China
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, NJ 07102, USA
| | - Michal Szostak
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, NJ 07102, USA
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Jameson B, Glaser R. Rotation-Inversion Isomerization of Tertiary Carbamates: Potential Energy Surface Analysis of Multi-Paths Isomerization Using Boltzmann Statistics. Chemphyschem 2023; 24:e202200442. [PMID: 36300905 DOI: 10.1002/cphc.202200442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 10/03/2022] [Indexed: 01/07/2023]
Abstract
Potential energy surface (PES) analyses at the SMD[MP2/6-311++G(d,p)] level and higher-level energies up to MP4(fc,SDTQ) are reported for the fluorinated tertiary carbamate N-ethyl-N-(2,2,2-trifluoroethyl) methyl carbamate (VII) and its parent system N,N-dimethyl methyl carbamate (VI). Emphasis is placed on the analysis of the rotational barrier about the CN carbamate bond and its interplay with the hybridization of the N-lone pair (NLP). All rotational transition state (TS) structures were found by computation of 1D relaxed rotational profiles but only 2D PES scans revealed the rotation-inversion paths in a compelling fashion. We found four unique chiral minima of VII, one pair each of E- and Z-rotamers, and we determined the eight unique rotational TS structures associated with every possible E/Z-isomerization path. It is a significant finding that all TS structures feature N-pyramidalization whereas the minima essentially contain sp2 -hybridized nitrogen. We will show that the TS stabilities are affected by the synergetic interplay between NLP/CO2 repulsion minimization, NLP→σ* (CO) negative hyperconjugation, and two modes of intramolecular through-space electrostatic stabilization. We demonstrate how Boltzmann statistics must be applied to determine the predicted experimental rotational barrier based on the energetics of all eight rotamerization pathways. The computed barrier for VII is in complete agreement with the experimentally measured barrier of the very similar fluorinated carbamate N-Boc-N-(2,2,2-trifluoroethyl)-4-aminobutan-1-ol II. NMR properties of VII were calculated with a variety of density functional/basis set combinations and Boltzmann averaging over the E- and Z-rotamers at our best theoretical level results in good agreement with experimental chemical shifts δ(13 C) and J(13 C,19 F) coupling constants of II (within 6 %).
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Affiliation(s)
- Brian Jameson
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri, 65401, USA
| | - Rainer Glaser
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri, 65401, USA
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Kovács E, Cseri L, Jancsó A, Terényi F, Fülöp A, Rózsa B, Galbács G, Mucsi Z. Synthesis and Fluorescence Mechanism of the Aminoimidazolone Analogues of the Green Fluorescent Protein: Towards Advanced Dyes with Enhanced Stokes Shift, Quantum Yield and Two‐Photon Absorption. European J Org Chem 2021. [DOI: 10.1002/ejoc.202101173] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Ervin Kovács
- Department of Chemistry Femtonics Inc. Tűzoltó u. 58 1094 Budapest Hungary
- Institute of Materials and Environmental Chemistry Research Centre for Natural Sciences Magyar tudósok körútja 2 1117 Budapest Hungary
| | - Levente Cseri
- Department of Chemistry Femtonics Inc. Tűzoltó u. 58 1094 Budapest Hungary
- Department of Chemical Engineering & Analytical Science The University of Manchester The Mill, Sackville Street Manchester M1 3BB United Kingdom
| | - Attila Jancsó
- Department of Inorganic and Analytical Chemistry University of Szeged Dóm tér 8 Szeged 6720 Hungary
| | - Ferenc Terényi
- Department of Inorganic and Analytical Chemistry University of Szeged Dóm tér 8 Szeged 6720 Hungary
| | - Anna Fülöp
- Department of Chemistry Femtonics Inc. Tűzoltó u. 58 1094 Budapest Hungary
| | - Balázs Rózsa
- Two-Photon Measurement Technology Research Group The Faculty of Information Technology Pázmány Péter Catholic University Práter u. 50/A Budapest 1083 Hungary
- Laboratory of 3D Functional Imaging of Neuronal Networks and Dendritic Integration Institute of Experimental Medicine Szigony utca 43 Budapest 1083 Hungary
| | - Gábor Galbács
- Department of Inorganic and Analytical Chemistry University of Szeged Dóm tér 8 Szeged 6720 Hungary
| | - Zoltán Mucsi
- Department of Chemistry Femtonics Inc. Tűzoltó u. 58 1094 Budapest Hungary
- Institute of Chemistry Faculty of Materials Science and Engineering University of Miskolc Egyetem út 1 Miskolc 3515 Hungary
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Abstract
In this contribution, we provide a comprehensive overview of acyclic twisted amides, covering the literature since 1993 (the year of the first recognized report on acyclic twisted amides) through June 2020. The review focuses on classes of acyclic twisted amides and their key structural properties, such as amide bond twist and nitrogen pyramidalization, which are primarily responsible for disrupting nN to π*C═O conjugation. Through discussing acyclic twisted amides in comparison with the classic bridged lactams and conformationally restricted cyclic fused amides, the reader is provided with an overview of amidic distortion that results in novel conformational features of acyclic amides that can be exploited in various fields of chemistry ranging from organic synthesis and polymers to biochemistry and structural chemistry and the current position of acyclic twisted amides in modern chemistry.
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Affiliation(s)
- Guangrong Meng
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Jin Zhang
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
- College of Chemistry and Chemical Engineering, Key Laboratory of Chemical Additives for China National Light Industry, Shaanxi University of Science and Technology, Xi'an 710021, China
| | - Michal Szostak
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
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Xie. P, Qin Z, Zhang S, Hong X. Understanding the Structure‐Activity Relationship of Ni‐Catalyzed Amide C−N Bond Activation using Distortion/Interaction Analysis. ChemCatChem 2021. [DOI: 10.1002/cctc.202100672] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Pei‐Pei Xie.
- Center of Chemistry for Frontier Technologies Department of Chemistry Zhejiang University Hangzhou 310027 P.R. China
| | - Zhi‐Xin Qin
- Center of Chemistry for Frontier Technologies Department of Chemistry Zhejiang University Hangzhou 310027 P.R. China
| | - Shuo‐Qing Zhang
- Center of Chemistry for Frontier Technologies Department of Chemistry Zhejiang University Hangzhou 310027 P.R. China
| | - Xin Hong
- Center of Chemistry for Frontier Technologies Department of Chemistry Zhejiang University Hangzhou 310027 P.R. China
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Szostak M, Li G. Non-Classical Amide Bond Formation: Transamidation and Amidation of Activated Amides and Esters by Selective N–C/O–C Cleavage. SYNTHESIS-STUTTGART 2020. [DOI: 10.1055/s-0040-1707101] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
In the past several years, tremendous advances have been made in non-classical routes for amide bond formation that involve transamidation and amidation reactions of activated amides and esters. These new methods enable the formation of extremely valuable amide bonds via transition-metal-catalyzed, transition-metal-free, or metal-free pathways by exploiting chemoselective acyl C–X (X = N, O) cleavage under mild conditions. In a broadest sense, these reactions overcome the formidable challenge of activating C–N/C–O bonds of amides or esters by rationally tackling nN → π*C=O delocalization in amides and nO → π*C=O donation in esters. In this account, we summarize the recent remarkable advances in the development of new methods for the synthesis of amides with a focus on (1) transition-metal/NHC-catalyzed C–N/C–O bond activation, (2) transition-metal-free highly selective cleavage of C–N/C–O bonds, (3) the development of new acyl-transfer reagents, and (4) other emerging methods.1 Introduction2 Transamidation of Amides2.1 Transamidation by Metal–NHC Catalysis (Pd–NHC, Ni–NHC)2.2 Transition-Metal-Free Transamidation via Tetrahedral Intermediates2.3 Reductive Transamidation2.4 New Acyl-Transfer Reagents2.5 Tandem Transamidations3 Amidation of Esters3.1 Amidation of Esters by Metal–NHC Catalysis (Pd–NHC, Ni–NHC)3.2 Transition-Metal-Free Amidation of Esters via Tetrahedral Intermediates3.3 Reductive Amidation of Esters4 Transamidations of Amides by Other Mechanisms5 Conclusions and Outlook
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Wang CA, Liu C, Szostak M. N-Acyl-5,5-Dimethylhydantoins: Mild Acyl-Transfer Reagents for the Synthesis of Ketones Using Pd–PEPPSI or Pd/Phosphine Catalysts. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00054] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Chang-An Wang
- College of Chemistry and Chemical Engineering, Taishan University, Tai’an, Shandong 271000, China
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Chengwei Liu
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Michal Szostak
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, New Jersey 07102, United States
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Li G, Szostak M. Transition-Metal-Free Activation of Amides by N-C Bond Cleavage. CHEM REC 2019; 20:649-659. [PMID: 31833633 DOI: 10.1002/tcr.201900072] [Citation(s) in RCA: 63] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2019] [Revised: 11/07/2019] [Accepted: 11/11/2019] [Indexed: 12/11/2022]
Abstract
The amide bond N-C activation represents a powerful strategy in organic synthesis to functionalize the historically inert amide linkage. This personal account highlights recent remarkable advances in transition-metal-free activation of amides by N-C bond cleavage, focusing on both (1) mechanistic aspects of ground-state-destabilization of the amide bond enabling formation of tetrahedral intermediates directly from amides with unprecedented selectivity, and (2) synthetic utility of the developed transformations. Direct nucleophilic addition to amides enables a myriad of powerful methods for the formation of C-C, C-N, C-O and C-S bonds, providing a straightforward and more synthetically useful alternative to acyl-metals.
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Affiliation(s)
- Guangchen Li
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, NJ 07102, United States
| | - Michal Szostak
- Department of Chemistry, Rutgers University, 73 Warren Street, Newark, NJ 07102, United States
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Chemistry of Bridged Lactams: Recent Developments. Molecules 2019; 24:molecules24020274. [PMID: 30642094 PMCID: PMC6359620 DOI: 10.3390/molecules24020274] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2018] [Revised: 01/09/2019] [Accepted: 01/10/2019] [Indexed: 12/15/2022] Open
Abstract
Bridged lactams represent the most effective and wide-ranging method of constraining the amide bond in a non-planar conformation. A previous comprehensive review on this topic was published in 2013 (Chem. Rev.2013, 113, 5701–5765). In the present review, which is published as a part of the Special Issue on Amide Bond Activation, we present an overview of the recent developments in the field of bridged lactams that have taken place in the last five years and present a critical assessment of the current status of bridged lactams in synthetic and physical organic chemistry. This review covers the period from 2014 until the end of 2018 and is intended as an update to Chem. Rev.2013, 113, 5701–5765. In addition to bridged lactams, the review covers recent advances in the chemistry of bridged sultams, bridged enamines and related non-planar structures.
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Abstract
Acyl Suzuki cross-coupling involves the coupling of an organoboron reagent with an acyl electrophile (acyl halide, anhydride, ester, amide). This review provides a timely overview of the very important advances that have recently taken place in the acylative Suzuki cross-coupling. Particular emphasis is directed toward the type of acyl electrophiles, catalyst systems and new cross-coupling partners. This review will be of value to synthetic chemists involved in this rapidly developing field of Suzuki cross-coupling as well as those interested in using acylative Suzuki cross-coupling for the synthesis of ketones as a catalytic alternative to stoichiometric nucleophilic additions or Friedel-Crafts reactions.
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Wang H, Zhang SQ, Hong X. Computational studies on Ni-catalyzed amide C–N bond activation. Chem Commun (Camb) 2019; 55:11330-11341. [DOI: 10.1039/c9cc05763c] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This review summarizes the mechanistic models of Ni-catalyzed amide C–N bond cleavage and discusses their applications in related transformations.
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Affiliation(s)
- Hongliang Wang
- Department of Chemistry
- Zhejiang University
- Hangzhou 310027
- China
| | - Shuo-Qing Zhang
- Department of Chemistry
- Zhejiang University
- Hangzhou 310027
- China
| | - Xin Hong
- Department of Chemistry
- Zhejiang University
- Hangzhou 310027
- China
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