1
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Kundu S, Mallick S, Riebe J, Niemeyer J. Directional Macrocycle Transport, Release, and Recapture Enabled by a Rotaxane Transporter. Chemistry 2025:e202501106. [PMID: 40194924 DOI: 10.1002/chem.202501106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2025] [Revised: 04/02/2025] [Accepted: 04/06/2025] [Indexed: 04/09/2025]
Abstract
A transporter for a directional macrocycle transport, release, and recapture was constructed. This was achieved using a rotaxane featuring a dibenzo-24-crown-8 macrocycle, dibenzylammonium (DBA)/methyl triazolium (MTA) stations on the thread and anthracene/triisopropylsilyl-acetylene stoppers, respectively. In the protonated rotaxane, the macrocycle primarily resides on the DBA station, followed by directional shuttling to the MTA station upon treatment with base. Addition of fluoride as an additional chemical input cleaves the triisopropylsilyl stopper, leading to release of the macrocycle and the half-thread into solution. The released macrocycle can be recaptured by protonation, and the mechanical bond can be reestablished via CuAAC click reaction, enabled by the terminal acetylene unit on the half-thread. This generates an elongated second-generation rotaxane transporter, which was used for a second cycle of directional macrocycle transport and release, proving the possibility of an iterative operation of the rotaxane-transporter in this molecular design.
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Affiliation(s)
- Sohom Kundu
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstrasse 7, 45141, Essen, Germany
- Research Center for Trustworthy Data Science and Security (UA Ruhr), Joseph-von-Fraunhofer-Str. 25, 44227, Dortmund, Germany
| | - Shubhadip Mallick
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstrasse 7, 45141, Essen, Germany
| | - Jan Riebe
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstrasse 7, 45141, Essen, Germany
| | - Jochen Niemeyer
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstrasse 7, 45141, Essen, Germany
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2
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Han XN, Long YJ, Guo WC, Han Y, Chen CF. One-step Macrocycle-to-Macrocycle Conversion Towards Two New Macrocyclic Arenes with Different Structures and Properties. Chemistry 2025; 31:e202403630. [PMID: 39532672 DOI: 10.1002/chem.202403630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2024] [Revised: 10/24/2024] [Accepted: 11/12/2024] [Indexed: 11/16/2024]
Abstract
Two new macrocyclic arenes H1 and H2 were conveniently synthesized by the one-step reaction of carboxylic acid substituted octopus[3]arene. It was found that H1 was composed of three ethenoanthracene subunits with a rigid hexagonal structure and H2 contained two ethenoanthracene subunits and one anthracene subunit with a rigid house-shaped structure. Among them, H2 exhibited strong blue fluorescence due to the existence of an anthracene subunit. Moreover, both H1 and H2 showed large and electron-rich cavities, which enable them to effectively complex different nitrogen-containing heterocyclic salt guests in solution and the solid state. It was further found that H2 exhibited stronger complexation towards the tested guests than H1 probably due to the stronger charge-transfer interactions between H2 and the guests.
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Affiliation(s)
- Xiao-Ni Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institution Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
| | - Yu-Jie Long
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institution Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Wei-Chen Guo
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institution Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ying Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institution Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institution Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
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3
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Catalán AC, Peña-Zarate L, Cervantes R, Vela A, Tiburcio J. Macrocycle Unidirectional Transport Along a Linear Molecule by a Two-Step Chemical Reaction Sequence. ChemistryOpen 2025; 14:e202400244. [PMID: 39468858 DOI: 10.1002/open.202400244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Revised: 08/29/2024] [Indexed: 10/30/2024] Open
Abstract
Chemical systems displaying directional motions are relevant to the operation of artificial molecular machines. Herein we present the functioning of a molecule capable of transporting a cyclic species in a preferential direction. Our system is based on a linear, non-symmetric, positively charged molecule. This cation integrates into its structure two different reactive regions. On one side features a bulky ester group that can be exchanged by a smaller substituent; the other extreme contains an acid/base responsive moiety that plays a dual role, as part of the recognition motif and as a terminal group. In the acidic state, a dibenzo-24-crown-8 ether slides into the linear component attracted by the positively charged recognition site. It does this selectively through the extreme that contains the azepanium group, since the other side is sterically hindered. After base addition, intermolecular interactions are lost; however, the macrocycle is unable to escape from the linear component since the energy barrier to slide over the neutral azepane is too large. Therefore, a metastable mechanically interlocked molecule is formed. A second reaction, now on the ester functionality, exchanges the bulky mesityl for a methyl group, small enough to allow macrocycle dissociation, completing the directional transit of the ring along the track.
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Affiliation(s)
- Aldo C Catalán
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Lucio Peña-Zarate
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Ruy Cervantes
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Alberto Vela
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Jorge Tiburcio
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
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4
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Wang JQ, Han XN, Han Y, Chen CF. Advances in circularly polarized luminescence materials based on chiral macrocycles. Chem Commun (Camb) 2023; 59:13089-13106. [PMID: 37830234 DOI: 10.1039/d3cc04187e] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2023]
Abstract
Development of circularly polarized luminescence (CPL) materials utilizing supramolecular strategies has recently attracted increasing interest in supramolecular chemistry and materials science. Chiral macrocycles, especially chiral macrocyclic hosts, have stable structures, adjustable internal cavities to encapsulate different guests, and host-guest complexation to induce special photophysical properties. Consequently, various CPL materials based on chiral macrocycles have been developed during the last decade. To gain a better understanding of this rapidly developing research area, it is necessary and also important to summarize the advances in CPL materials based on chiral macrocycles. In this review, CPL materials from different chiral macrocycles, especially classical and newly reported chiral macrocyclic hosts and their derivatives, will be comprehensively summarized. It is believed that this review will be of guiding significance and also very helpful for the development of macrocyclic chemistry and CPL materials.
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Affiliation(s)
- Jia-Qi Wang
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiao-Ni Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
| | - Ying Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
- University of Chinese Academy of Sciences, Beijing 100049, China
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5
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Liu G, Guo S, Liu L, Fan Y, Lian Z, Chen X, Jiang H. Shape-Persistent Triptycene-Derived Pillar[6]arenes: Synthesis, Host-Guest Complexation, and Enantioselective Recognitions of Chiral Ammonium Salts. J Org Chem 2023. [PMID: 37437175 DOI: 10.1021/acs.joc.3c01197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/14/2023]
Abstract
Construction of macrocyclic hosts with a novel structure and excellent property has emerged as an intriguing undertaking for the past few years. Here, we reported the synthesis of shape-persistent triptycene-derived pillar[6]arene (TP[6]). The single crystal structure analysis revealed that the macrocyclic molecule adopts a hexagonal structure, featuring a helical and electron-rich cavity capable of encapsulating electron-deficient guests. In order to obtain chiral TP[6] from an enantiomerically pure triptycene building block, an efficient resolution of chiral triptycene was successfully developed through introducing chiral auxiliaries into triptycene skeletons. The 1H NMR and isothermal titration calorimetry investigations demonstrated that chiral TP[6] exhibited enantioselectivity toward four pairs of chiral guests containing a trimethylamino group, implying a significant promising application in area of enantioselective recognition.
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Affiliation(s)
- Guoqin Liu
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Shengzhu Guo
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Lin Liu
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Yanqing Fan
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Zhe Lian
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Xuebo Chen
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
| | - Hua Jiang
- College of Chemistry, Beijing Normal University, Beijing 100875, P.R. China
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6
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Han XN, Han Y, Chen CF. Recent advances in the synthesis and applications of macrocyclic arenes. Chem Soc Rev 2023; 52:3265-3298. [PMID: 37083011 DOI: 10.1039/d3cs00002h] [Citation(s) in RCA: 72] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/22/2023]
Abstract
Macrocyclic arenes including calixarenes, resorcinarenes, cyclotriveratrylene, pillararenes and so on have emerged as highly attractive synthetic macrocyclic hosts due to their unique structures, facile functionalization, and broad range of applications. In recent years, there has been growing interest in the development of novel macrocyclic arenes composed of various aromatic building blocks bridged by methylene groups, which have found applications in various research areas. Consequently, the development of novel macrocyclic arenes has become a frontier and hot topic in supramolecular and macrocyclic chemistry. In this review, we feature the recent advances in the synthesis and applications of novel macrocyclic arenes that have emerged in the last decade. The general synthetic strategies employed for these macrocyclic arenes are systematically summarized, and their wide applications in molecular recognition and assemblies, molecular machines, biomedical science and functional materials are highlighted.
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Affiliation(s)
- Xiao-Ni Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
| | - Ying Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
- University of Chinese Academy of Sciences, Beijing 100049, China
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7
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Chiral Nanocluster Complexes Formed by Host-Guest Interaction between Enantiomeric 2,6-Helic[6]arenes and Silver Cluster Ag 20: Emission Enhancement and Chirality Transfer. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27123932. [PMID: 35745054 PMCID: PMC9230552 DOI: 10.3390/molecules27123932] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 06/17/2022] [Accepted: 06/17/2022] [Indexed: 12/05/2022]
Abstract
A pair of chiral nanocluster complexes were formed by the host−guest interaction between the enantiomeric 2,6-helic[6]arenes and nanocluster Ag20. The formation and stability of the nanocluster complexes were experimentally and theoretically confirmed. Meanwhile, the chiral nanocluster complexes exhibited enhanced luminescence and induced CD signals at room temperature in the solid state, revealing the stable complexation and chirality transfer from the chiral macrocycles to the nanocluster Ag20.
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8
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Wang Y, Zhang G, Huang Y, Guo M, Song J, Zhang T, Long Y, Wang B, Liu H. A Potential Biofertilizer—Siderophilic Bacteria Isolated From the Rhizosphere of Paris polyphylla var. yunnanensis. Front Microbiol 2022; 13:870413. [PMID: 35615507 PMCID: PMC9125218 DOI: 10.3389/fmicb.2022.870413] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2022] [Accepted: 03/28/2022] [Indexed: 11/13/2022] Open
Abstract
The increasing demands for crop production have become a great challenge while people also realizing the significance of reductions in synthetic chemical fertilizer use. Plant growth-promoting rhizobacteria (PGPR) are proven biofertilizers for increasing crop yields by promoting plant growth via various direct or indirect mechanisms. Siderophilic bacteria, as an important type of PGPR, can secrete siderophores to chelate unusable Fe3+ in the soil for plant growth. Siderophilic bacteria have been shown to play vital roles in preventing diseases and enhancing the growth of plants. Paris polyphylla var. yunnanensis (PPVY) is an important traditional Chinese herb. However, reports about its siderophilic bacteria are still rare. This study firstly isolated siderophilic bacteria from the rhizosphere soil of PPVY, identified by morphological and physio-biochemical characteristics as well as 16S rRNA sequence analysis. The dominant genus in the rhizobacteria of PPVY was Bacillus. Among 22 isolates, 21 isolates produced siderophores. The relative amount of siderophores ranged from 4 to 41%. Most of the isolates produced hydroxamate siderophores and some produced catechol. Four isolates belonging to Enterobacter produced the catechol type, and none of them produced carboxylate siderophores. Intriguingly, 16 strains could produce substances that have inhibitory activity against Candida albicans only in an iron-limited medium (SA medium). The effects of different concentrations of Fe3+ and three types of synthetic chemical fertilizers on AS19 growth, siderophore production, and swimming motility were first evaluated from multiple aspects. The study also found that the cell-free supernatant (CFS) with high siderophore units (SUs) of AS19 strain could significantly promote the germination of pepper and maize seeds and the development of the shoots and leaves of Gynura divaricata (Linn.). The bacterial solution of AS19 strain could significantly promote the elongation of the roots of G. divaricata (Linn.). Due to its combined traits promoting plant growth and seed germination, the AS19 has the potential to become a bioinoculant. This study will broaden the application prospects of the siderophilic bacteria-AS19 as biofertilizers for future sustainable agriculture.
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Affiliation(s)
- Yihan Wang
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Gongyou Zhang
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Ya Huang
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Min Guo
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Juhui Song
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Tingting Zhang
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- Key Laboratory of Biology and Medical Engineering, Immune Cells and Antibody Engineering Research Center of Guizhou Province, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Yaohang Long
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- Key Laboratory of Biology and Medical Engineering, Immune Cells and Antibody Engineering Research Center of Guizhou Province, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
| | - Bing Wang
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- Key Laboratory of Biology and Medical Engineering, Immune Cells and Antibody Engineering Research Center of Guizhou Province, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- *Correspondence: Bing Wang,
| | - Hongmei Liu
- Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- Key Laboratory of Biology and Medical Engineering, Immune Cells and Antibody Engineering Research Center of Guizhou Province, School of Biology and Engineering, Guizhou Medical University, Guiyang, China
- School of Basic Medicine Science, Guizhou Medical University, Guiyang, China
- Hongmei Liu,
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9
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David AHG, García–Cerezo P, Campaña AG, Santoyo–González F, Blanco V. Vinyl sulfonyl chemistry-driven unidirectional transport of a macrocycle through a [2]rotaxane. Org Chem Front 2022. [DOI: 10.1039/d1qo01491a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The pH- and chemically-driven unidirectional transport of a macrocycle through a [2]rotaxane based on the vinyl sulfonyl groups is reported.
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Affiliation(s)
- Arthur H. G. David
- Departamento de Química Orgánica, Facultad de Ciencias, Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Universidad de Granada (UGR), Avda. Fuente Nueva S/N, 18071 Granada, Spain
| | - Pablo García–Cerezo
- Departamento de Química Orgánica, Facultad de Ciencias, Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Universidad de Granada (UGR), Avda. Fuente Nueva S/N, 18071 Granada, Spain
| | - Araceli G. Campaña
- Departamento de Química Orgánica, Facultad de Ciencias, Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Universidad de Granada (UGR), Avda. Fuente Nueva S/N, 18071 Granada, Spain
| | - Francisco Santoyo–González
- Departamento de Química Orgánica, Facultad de Ciencias, Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Universidad de Granada (UGR), Avda. Fuente Nueva S/N, 18071 Granada, Spain
| | - Victor Blanco
- Departamento de Química Orgánica, Facultad de Ciencias, Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Universidad de Granada (UGR), Avda. Fuente Nueva S/N, 18071 Granada, Spain
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10
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Gu MJ, Wang YF, Han Y, Chen CF. Recent advances on triptycene derivatives in supramolecular and materials chemistry. Org Biomol Chem 2021; 19:10047-10067. [PMID: 34751696 DOI: 10.1039/d1ob01818c] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Triptycene derivatives, a type of specific aromatic compound, have been attracting much attention in many research areas. Over the past several years, triptycene and its derivatives have been described to be useful and efficient building blocks for the design and synthesis of novel supramolecular acceptors, porous materials and luminescent materials with specific structures and properties. In this review, recent researches on triptycene derivatives in supramolecular and materials chemistry are summarized. Especially, the construction of a new type of macrocyclic arenes and organic cages with triptycene and its derivatives as building blocks are focused on, and their applications in molecular recognition, self-assembly and gas selective sorption are highlighted. Moreover, the applications of triptycene and its derivatives in porous organic materials and thermally activated delayed fluorescence (TADF) materials are also discussed.
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Affiliation(s)
- Meng-Jie Gu
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. .,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yin-Feng Wang
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. .,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. .,University of Chinese Academy of Sciences, Beijing 100049, China
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11
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Fu H, Chipot C, Cai W, Shao X. Repurposing Existing Molecular Machines through Accurate Regulation of Cooperative Motions. J Phys Chem Lett 2021; 12:613-619. [PMID: 33382629 DOI: 10.1021/acs.jpclett.0c03444] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
To understand how different external stimuli affect the cooperative motions in a molecular machine consisting of multiple components, we have investigated at the atomic level the effects of pH, solvent, and ionic strength on the mechanism underlying the ring-through-ring movement in a saturated [3]rotaxane. Our results indicate that different external stimuli regulate the stable states, the shuttling rate, and the mechanism that governs the ring-through-ring motion by controlling the cooperative movement of the components and triggering a gamut of responses, thereby opening to a vast number of potential applications, such as quaternary logical calculations. The present work cogently demonstrates that with existing nanomachines possessing a simple topology, but using different external stimuli-an approach coined multidimensional regulation-challenging tasks requiring precise control of the molecular motions at play can be achieved, and our methodology is particularly germane for de novo design of intelligent molecular machines.
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Affiliation(s)
- Haohao Fu
- Research Center for Analytical Sciences, College of Chemistry, Nankai University, Tianjin Key Laboratory of Biosensing and Molecular Recognition, State Key Laboratory of Medicinal Chemical Biology, Tianjin 300071, China
| | - Christophe Chipot
- Laboratoire International Associé CNRS and University of Illinois at Urbana-Champaign, UMR No. 7019, Université de Lorraine, BP 70239, F-54506 Vandœuvre-lès-Nancy, France
- Department of Physics, University of Illinois at Urbana-Champaign, 1110 West Green Street, Urbana, Illinois 61801, United States
| | - Wensheng Cai
- Research Center for Analytical Sciences, College of Chemistry, Nankai University, Tianjin Key Laboratory of Biosensing and Molecular Recognition, State Key Laboratory of Medicinal Chemical Biology, Tianjin 300071, China
| | - Xueguang Shao
- Research Center for Analytical Sciences, College of Chemistry, Nankai University, Tianjin Key Laboratory of Biosensing and Molecular Recognition, State Key Laboratory of Medicinal Chemical Biology, Tianjin 300071, China
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12
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Rajappan SC, McCarthy DR, Campbell JP, Ferrell JB, Sharafi M, Ambrozaite O, Li J, Schneebeli ST. Selective Monofunctionalization Enabled by Reaction-History-Dependent Communication in Catalytic Rotaxanes. Angew Chem Int Ed Engl 2020; 59:16668-16674. [PMID: 32525593 DOI: 10.1002/anie.202006305] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Indexed: 12/24/2022]
Abstract
Selective monofunctionalization of substrates with distant, yet equally reactive functional groups is difficult to achieve, as it requires the second functional group to selectively modulate its reactivity once the first functional group has reacted. We now show that mechanically interlocked catalytic rings can effectively regulate the reactivity of stoppering groups in rotaxanes over a distance of about 2 nm. Our mechanism of communication is enabled by a unique interlocked design, which effectively removes the catalytic rings from the substrates by fast dethreading as soon as the first reaction has taken place. Our method not only led to a rare example of selective monofunctionalization, but also to a "molecular if function". Overall, the study presents a way to get distant functional groups to communicate with each other in a reaction-history-dependent manner by creating linkers that can ultimately perform logical operations at the molecular level.
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Affiliation(s)
- Sinu C Rajappan
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Dillon R McCarthy
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Joseph P Campbell
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Jonathon B Ferrell
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Mona Sharafi
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Ona Ambrozaite
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
| | - Jianing Li
- Department of Chemistry, University of Vermont, Burlington, VT, 05405, USA
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13
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Li J, Han XN, Zhou HY, Han Y, Chen CF. Helic[1]triptycene[3]arene: Synthesis, Complexation, and Formation of [2]Rotaxane Shuttle. J Org Chem 2020; 85:11465-11474. [PMID: 32791824 DOI: 10.1021/acs.joc.0c01558] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
A new macrocyclic arene, helic[1]triptycene[3]arene H, was conveniently synthesized in 37% yield by a one-pot reaction starting from 2,6-dimethoxyl-3,7-dihydroxymethyltriptycene. Macrocycle H showed fixed conformation in solution and could form 1:1 complexes with a series of neutral guests, secondary ammonium salts, and tertiary ammonium salts in both solution and solid states. The association constants between H and the neutral guests were between (1.23 ± 0.10) × 102 and (4.70 ± 0.47) × 103 M-1, while the association constants between H and the ammonium guests were between (1.35 ± 0.12) × 103 and (1.59 ± 0.14) × 105 M-1. Moreover, H showed bigger association constants with secondary ammonium salts than those with tertiary ammonium salts possibly because of the steric hindrance effect and multiple intermolecular interactions. The stimuli-responsive complexation between H and the ammonium salts could be controlled by the addition and removal of acids and bases as well. Based on the host-guest complexation between H and the secondary ammonium salt, [2]rotaxane was further synthesized, and its shuttling motion could be efficiently controlled by an acid and base.
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Affiliation(s)
- Jing Li
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiao-Ni Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - He-Ye Zhou
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Han
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
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14
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Guo QH, Qiu Y, Kuang X, Liang J, Feng Y, Zhang L, Jiao Y, Shen D, Astumian RD, Stoddart JF. Artificial Molecular Pump Operating in Response to Electricity and Light. J Am Chem Soc 2020; 142:14443-14449. [DOI: 10.1021/jacs.0c06663] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Qing-Hui Guo
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yunyan Qiu
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Xinyi Kuang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Jiaqi Liang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yuanning Feng
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Long Zhang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yang Jiao
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Dengke Shen
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - R. Dean Astumian
- Department of Physics, University of Maine, 5709 Bennet Hall, Orono, Maine 04469, United States
| | - J. Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
- Institute for Molecular Design and Synthesis, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, China
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
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15
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Rajappan SC, McCarthy DR, Campbell JP, Ferrell JB, Sharafi M, Ambrozaite O, Li J, Schneebeli ST. Selective Monofunctionalization Enabled by Reaction‐History‐Dependent Communication in Catalytic Rotaxanes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006305] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Sinu C. Rajappan
- Department of Chemistry University of Vermont Burlington VT 05405 USA
| | | | | | | | - Mona Sharafi
- Department of Chemistry University of Vermont Burlington VT 05405 USA
| | - Ona Ambrozaite
- Department of Chemistry University of Vermont Burlington VT 05405 USA
| | - Jianing Li
- Department of Chemistry University of Vermont Burlington VT 05405 USA
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