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Brydon SC, Thomson C, O'Hair RAJ, White JM. Electronic and Steric Effects on the Reactivity of Seleniranium Ions with Alkenes in the Gas Phase. J Org Chem 2023; 88:9629-9644. [PMID: 36705983 DOI: 10.1021/acs.joc.2c02233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Gas phase ion-molecule reactions between seleniranium ions, R-c-SeCH2CH2+, and cis-cyclooctene were used to probe electronic and steric effects of substituents on kinetics and branching ratios. The second-order rate coefficients increased in the order p-OMeC6H4 < C6H5 < p-BrC6H4 < p-CF3C6H4 < m-NO2C6H4, giving a Hammett plot with R2 = 0.98 and ρ = +1.66. The two main pathways include direct transfer of the selenium moiety to the incoming alkene (π-ligand exchange) and the less favored ring-opening by attack at an iranium carbon to give a cis-bicyclic selenonium ion as supported by density functional theory (DFT) calculations. Branching ratios of each pathway indicated that electron-withdrawing groups directed more attack at carbon than selenium in agreement with previous solution-phase results. Increased steric bulk on selenium was investigated by changing the R group from a methyl to t-butyl, which not only shut down π-ligand exchange but also significantly reduced the overall reactivity. Finally, the reactivity of the iranium ion derived from Se-methylselenocysteine was investigated and shown to react faster and favor π-ligand exchange as the leaving group was changed from ethene to acrylic acid.
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Affiliation(s)
- Samuel C Brydon
- School of Chemistry and Bio21 Institute, The University of Melbourne, Parkville, VIC 3010, Australia
| | - Catriona Thomson
- School of Chemistry and Bio21 Institute, The University of Melbourne, Parkville, VIC 3010, Australia
| | - Richard A J O'Hair
- School of Chemistry and Bio21 Institute, The University of Melbourne, Parkville, VIC 3010, Australia
| | - Jonathan M White
- School of Chemistry and Bio21 Institute, The University of Melbourne, Parkville, VIC 3010, Australia
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Rozentsveig IB, Nikonova VS, Manuilov VV, Ushakov IA, Borodina TN, Smirnov VI, Korchevin NA. Heterocyclization of Bis(2-chloroprop-2-en-1-yl)sulfide in Hydrazine Hydrate–KOH: Synthesis of Thiophene and Pyrrole Derivatives. Molecules 2022; 27:molecules27206785. [PMID: 36296380 PMCID: PMC9609936 DOI: 10.3390/molecules27206785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 10/03/2022] [Accepted: 10/05/2022] [Indexed: 11/30/2022] Open
Abstract
The article is devoted to heterocyclization of bis(2-chloroprop-2-en-1-yl)sulfide which proceeds in hydrazine hydrate–alkali medium and leads to formation of thiophene and pyrrole derivatives: previously described 4,5,9,10-tetrahydrocycloocta[1,2-c;5,8-c’]dithiophene, as well as unknown hydrazone of 5-methylidene-3-methyldihydrothiophen-2-one and 1-amino-2-(propynylsulfanylpropenylsulfanyl)-3,5-dimethylpyrrole. Tentative mechanisms for the formation of the heterocyclic products are discussed. Obtained hydrazone of 5-methylidene-3-methyldihydrothiophen-2-one was used for the synthesis of a range of azine derivatives and in oxidation process with SeO2. The found reactions open up expedient approaches to the formation of various hardly accessible thiophene and pyrrole compounds from 2,3-dichloropropene and elemental sulfur as starting reagents.
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Affiliation(s)
- Igor B. Rozentsveig
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
- Chemistry Department, Irkutsk State University, Karl Marx Str., 1, 664003 Irkutsk, Russia
- Correspondence:
| | - Valentina S. Nikonova
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
| | - Victor V. Manuilov
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
| | - Igor A. Ushakov
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
| | - Tatyana N. Borodina
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
| | - Vladimir I. Smirnov
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
| | - Nikolay A. Korchevin
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky St., 664033 Irkutsk, Russia
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Shi H, Wang X, Li X, Zhang B, Li X, Zhang J, Yang J, Du Y. Trifluoromethylthiolation/Selenolation and Lactonization of 2-Alkynylbenzoate: The Application of Benzyl Trifluoromethyl Sulfoxide/Selenium Sulfoxides as SCF 3/SeCF 3 Reagents. Org Lett 2022; 24:2214-2219. [DOI: 10.1021/acs.orglett.2c00563] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Haofeng Shi
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Xingzong Wang
- Hebei Key Laboratory of State Key Laboratory of Metastable Materials Science and Technology, Yanshan University, Qinhuangdao 066004, China
- Nano-biotechnology Key Lab of Hebei Province, Yanshan University, Qinhuangdao 066004, China
| | - Xiaoxian Li
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Beibei Zhang
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Xuemin Li
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Jingran Zhang
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Jingyue Yang
- Hebei Key Laboratory of State Key Laboratory of Metastable Materials Science and Technology, Yanshan University, Qinhuangdao 066004, China
- Nano-biotechnology Key Lab of Hebei Province, Yanshan University, Qinhuangdao 066004, China
| | - Yunfei Du
- Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
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Brydon SC, da Silva G, O'Hair RAJ, White JM. Experimental and theoretical investigations into the mechanisms of haliranium ion π-ligand exchange reactions with cyclic alkenes in the gas phase. Phys Chem Chem Phys 2021; 23:25572-25589. [PMID: 34783339 DOI: 10.1039/d1cp04494j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Haliranium ions are intermediates often involved in complex cyclisations, where their structure allows for control over stereospecific outcomes. Extending previous studies into their structure and reactivity in the gas phase, this work focuses on the bimolecular reactivity of ethyl bromiranium and iodiranium ions with cyclic alkenes. The products observed via mass spectrometry were broadly attributed to either addition by cyclohexene at the iranium carbon or attack at the heteroatom to undergo associative π-ligand exchange. The model proposed was supported by both kinetic experiments and DFT calculations, where the rate of parent ion consumption proceeded at the collision rate (Br: k2 = 1.25 × 10-9 and I: k2 = 1.28 × 10-9 cm3 molecule-1 s-1) with the subsequent partitioning dependent on the relative stability of the initial intermediates and the relatively large barriers present in the addition pathway. Exploration of the effect of cycloalkene ring strain on the iodiranium ion reactivity was conducted with a series of crossover experiments with 50 : 50 mixtures of either cyclohexene or cis-cyclooctene and styrene, where the outcomes were dependent on the competing ring strain relief gained by reaction with each neutral. The nature of the exchange transition state was determined to be pseudocoarctate following both natural bond orbital (NBO) and anisotropy of the induced current density (ACID) analysis.
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Affiliation(s)
- Samuel C Brydon
- School of Chemistry and Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia.
| | - Gabriel da Silva
- Chemical Engineering, The University of Melbourne, Parkville, Victoria 3010, Australia
| | - Richard A J O'Hair
- School of Chemistry and Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia.
| | - Jonathan M White
- School of Chemistry and Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia.
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Li X, Wang Y, Ouyang Y, Yu Z, Zhang B, Zhang J, Shi H, Zuilhof H, Du Y. Unexpected Substituent Effects in Spiro-Compound Formation: Steering N-Aryl Propynamides and DMSO toward Site-Specific Sulfination in Quinolin-2-ones or Spiro[4,5]trienones. J Org Chem 2021; 86:9490-9502. [PMID: 34184892 PMCID: PMC8291627 DOI: 10.1021/acs.joc.1c00775] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
![]()
A highly substituent-dependent
rearrangement allows for the novel and SOCl2-induced divergent
synthesis of 3-methylthioquinolin-2-ones and 3-methylthiospiro[4.5]trienones
through intramolecular electrophilic cyclization of N-aryl propyamides. DMSO acts as both solvent and sulfur source, and
use of DMSO-h6/d6 enables the incorporation of SCH3 or SCD3 moieties to the 3-position of the heterocyclic framework. Different para-substituents trigger divergent reaction pathways leading
to the formation of quinolin-2-ones for mild substituents and spiro[4,5]trienones
for both electron-withdrawing and -donating substituents, respectively.
On the basis of both computational and experimental results, a new
mechanism has been put forward that accounts for the exclusive spirolization/defluorination
process and the surprising substituent effects.
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Affiliation(s)
- Xiaoxian Li
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Yuanxun Wang
- National Institute of Biological Sciences, Beijing, No. 7 Science Park Road, Zhongguancun Life Science Park, Beijing 102206, China
| | - Yaxin Ouyang
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Zhenyang Yu
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Beibei Zhang
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Jingran Zhang
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Haofeng Shi
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
| | - Han Zuilhof
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China.,Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6703 WE Wageningen, The Netherlands.,Department of Chemical and Materials Engineering, Faculty of Engineering, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Yunfei Du
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China
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Brydon SC, Silva G, White JM. Evidence that π‐ligand exchange reactions of chalcogen iranium ions proceed via Hückel pseudocoarctate transition states. J PHYS ORG CHEM 2020. [DOI: 10.1002/poc.4111] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Samuel C. Brydon
- School of Chemistry and Bio21 Institute The University of Melbourne Parkville Victoria Australia
| | - Gabriel Silva
- Chemical Engineering The University of Melbourne Parkville Victoria Australia
| | - Jonathan M. White
- School of Chemistry and Bio21 Institute The University of Melbourne Parkville Victoria Australia
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Brydon SC, Ren Z, da Silva G, Lim SF, Khairallah GN, Rathjen MJ, White JM, O'Hair RAJ. Experimental and DFT Studies on the Identity Exchange Reactions between Phenyl Chalcogen Iranium Ions and Alkenes. J Phys Chem A 2019; 123:8200-8207. [PMID: 31512874 DOI: 10.1021/acs.jpca.9b06004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The gas-phase ion-molecule identity exchange reactions of phenyl chalcogen iranium ions with alkenes have been examined experimentally in a linear ion trap mass spectrometer by isotope labeling experiments. The nature of both the alkene and the chalcogen play crucial roles, with the bimolecular rates for π-ligand exchange following the order: [PhTe(c-C6H10)]+ + c-C6D10 > [PhTe(C2D4)]+ + C2H4 > [PhSe(c-C6H10)]+ + c-C6D10, with no reaction being observed for [PhSe(C2D4)]+ + C2H4, [PhS(C2D4)]+ + C2H4, and [PhS(c-C6H10)]+ + c-C6D10. The experimental results correlate with RRKM modeling and density functional theory (DFT) calculations, which also demonstrates that these reactions proceed via associative mechanisms. Natural bond orbital (NBO) analysis reveals a shift in the association complexes from a σ-hole interaction to ones mirroring the π-p+ and n-π* at the transition state in accordance with the rates of reaction.
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Affiliation(s)
- Samuel C Brydon
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - Zhonghua Ren
- Chemical and Biomolecular Engineering , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - Gabriel da Silva
- Chemical and Biomolecular Engineering , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - S Fern Lim
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - George N Khairallah
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia.,Accurate Mass Scientific Pty Ltd. , P.O. Box 92, Keilor VIC 3036 , Australia
| | - Michael J Rathjen
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - Jonathan M White
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia
| | - Richard A J O'Hair
- School of Chemistry and Bio21 Institute , The University of Melbourne , Parkville , Victoria 3010 , Australia
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