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For: Dhabal D, Jiang Z, Pallath A, Patel AJ. Characterizing the Interplay between Polymer Solvation and Conformation. J Phys Chem B 2021;125:5434-5442. [PMID: 33978411 DOI: 10.1021/acs.jpcb.1c02191] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Number Cited by Other Article(s)
1
Zajac JWP, Muralikrishnan P, Tohidian I, Zeng X, Heldt CL, Perry SL, Sarupria S. Flipping out: role of arginine in hydrophobic interactions and biological formulation design. Chem Sci 2025;16:6780-6792. [PMID: 40110519 PMCID: PMC11915020 DOI: 10.1039/d4sc08672d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2024] [Accepted: 03/09/2025] [Indexed: 03/22/2025]  Open
2
Polanowski P, Sikorski A. Monte Carlo Simulations of Polymer Collapse in an Explicit Solvent of Varying Quality. Polymers (Basel) 2025;17:978. [PMID: 40219366 PMCID: PMC11991173 DOI: 10.3390/polym17070978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2025] [Revised: 03/27/2025] [Accepted: 03/28/2025] [Indexed: 04/14/2025]  Open
3
Dhibar S, Jana B. Optimized Collective Variable for Collapse Transition in Linear Hydrophobic Polymers: Importance of Hydration Water and End-to-End Distance. J Chem Theory Comput 2024;20:7404-7415. [PMID: 39252562 DOI: 10.1021/acs.jctc.4c00753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/11/2024]
4
Garduño-Juárez R, Tovar-Anaya DO, Perez-Aguilar JM, Lozano-Aguirre Beltran LF, Zubillaga RA, Alvarez-Perez MA, Villarreal-Ramirez E. Molecular Dynamic Simulations for Biopolymers with Biomedical Applications. Polymers (Basel) 2024;16:1864. [PMID: 39000719 PMCID: PMC11244511 DOI: 10.3390/polym16131864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 04/13/2024] [Accepted: 04/13/2024] [Indexed: 07/17/2024]  Open
5
Herringer NSM, Dasetty S, Gandhi D, Lee J, Ferguson AL. Permutationally Invariant Networks for Enhanced Sampling (PINES): Discovery of Multimolecular and Solvent-Inclusive Collective Variables. J Chem Theory Comput 2024;20:178-198. [PMID: 38150421 DOI: 10.1021/acs.jctc.3c00923] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2023]
6
Polanowski P, Sikorski A. Coil-globule transition in two-dimensional polymer chains in an explicit solvent. SOFT MATTER 2023;19:7979-7987. [PMID: 37818732 DOI: 10.1039/d3sm00975k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/13/2023]
7
Olczyk P, Sikorski A. Structure of Strongly Adsorbed Polymer Systems: A Computer Simulation Study. MATERIALS (BASEL, SWITZERLAND) 2023;16:5755. [PMID: 37687448 PMCID: PMC10488969 DOI: 10.3390/ma16175755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 08/02/2023] [Accepted: 08/18/2023] [Indexed: 09/10/2023]
8
Charvati E, Sun H. Potential Energy Surfaces Sampled in Cremer-Pople Coordinates and Represented by Common Force Field Functionals for Small Cyclic Molecules. J Phys Chem A 2023;127:2646-2663. [PMID: 36893434 DOI: 10.1021/acs.jpca.3c00095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/11/2023]
9
Schmid F. Virtual Issue on Polymers: Recent Advances from a Physical Chemistry Perspective. J Phys Chem B 2022;126:8359-8361. [PMID: 36300292 DOI: 10.1021/acs.jpcb.2c06378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
10
Huang Y, Cheng S. Chain conformations and phase separation in polymer solutions with varying solvent quality. JOURNAL OF POLYMER SCIENCE 2021. [DOI: 10.1002/pol.20210526] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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