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Mudi A, Ray S, Bera M, Dolai M, Das M, Kundu P, Laha S, Choudhuri I, Chandra Samanta B, Bhattacharyya N, Maity T. A multi-spectroscopic and molecular docking approach for DNA/protein binding study and cell viability assay of first-time reported pendent azide bearing Cu(II)-quercetin and dicyanamide bearing Zn(II)-quercetin complexes. Heliyon 2023; 9:e22712. [PMID: 38125469 PMCID: PMC10731082 DOI: 10.1016/j.heliyon.2023.e22712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 11/16/2023] [Accepted: 11/16/2023] [Indexed: 12/23/2023] Open
Abstract
In the current study, one new quercetin-based Zn(II) complex [Zn(Qr)(CNNCN)(H2O)2] (Complex 1) which is developed by condensation of quercetin with ZnCl2 in the presence of NaN(CN)2 and Cu(II) complex [Cu(Qr)N3(CH3OH)(H2O)] (complex 2) which is developed by the condensation reaction of quercetin and CuCl2 in presence of NaN3, are thoroughly examined in relation to their use in biomedicine. The results of several spectroscopic studied confirm the structure of both the complexes and the Density Functional Theory (DFT) study helps to optimize the structure of complex 1 and 2. After completion of the identification process, DNA and Human Serum Albumin (HSA) binding efficacy of both the investigated complexes are performed by implementing a long range of biophysical studies and a thorough analysis of the results unveils that complex 1 has better interaction efficacy with the macromolecules than complex 2. The binding efficacy of complex 1 is comparatively higher towards both macromolecules because of its pure groove binding mode during interaction with DNA and the presence of an extra H-bond during connection with HSA. The experimental host-guest binding results is fully validated by molecular docking study. Interestingly complex 1 shows better antioxidant properties than complex 2, as well as quercetin, and it has strong anticancer property with minimal damage to normal cells, which is proved by the MTT assay study. Better DNA and HSA binding efficacy of 1 may be the reason for the better anticancer property of complex 1.
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Affiliation(s)
- Anupam Mudi
- Department of Botany, Behala College, Behala, India
| | - Shubham Ray
- Department of Chemistry, Prabhat Kumar College, Contai, Contai, Purba Medinipur, 721404, India
| | - Manjushree Bera
- Department of Nutrition, Prabhat Kumar College, Contai, Contai, Purba Medinipur, 721404, India
| | - Malay Dolai
- Department of Chemistry, Prabhat Kumar College, Contai, Contai, Purba Medinipur, 721404, India
| | - Manik Das
- Department of Chemistry, Prabhat Kumar College, Contai, Contai, Purba Medinipur, 721404, India
| | - Pronab Kundu
- Department of Chemistry, Presidency University, Yelahanka, Bengaluru, 560064, India
| | | | | | | | | | - Tithi Maity
- Department of Chemistry, Prabhat Kumar College, Contai, Contai, Purba Medinipur, 721404, India
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2
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Khatun R, Modak R, Islam ASM, Moni D, Sepay N, Mukherjee R, Das G, Murmu N, Ali M. Small Molecule Interactions with Biomacromolecules: DNA Binding Interactions of a Manganese(III) Schiff Base Complex with Potential Anticancer Activities. ACS APPLIED BIO MATERIALS 2023; 6:3176-3188. [PMID: 37548990 DOI: 10.1021/acsabm.3c00297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
A manganese(III) complex, [MnIII(L)(SCN)(enH)](NO3)·H2O (1•H2O) (H2L = 2-((E)-(2-((E)-2-hydroxy-3-methoxybenzylidene-amino)-ethyl-imino)methyl)-6-methoxyphenol), has been synthesized and characterized by single-crystal X-ray diffraction analysis. The interaction of 1•H2O with DNA was studied by monitoring the decrease in absorbance of the complex at λ = 324 nm with the increase in DNA concentration, providing an opportunity to determine the binding constant of the 1•H2O-ct-DNA complex as 5.63 × 103 M-1. Similarly, fluorescence titration was carried out by adding ct-DNA gradually and monitoring the increase in emission intensity at 453 nm on excitation at λex = 324 nm. A linear form of the Benesi-Hildebrand equation yields a binding constant of 4.40 × 103 M-1 at 25 °C, establishing the self-consistency of our results obtained from absorption and fluorescence titrations. The competitive displacement reactions of dyes like ethidium bromide, Hoechst, and DAPI (4',6-diamidine-2'-phenylindole dihydrochloride) from dye-ct-DNA conjugates by 1•H2O were analyzed, and the corresponding KSV values are 1.05 × 104, 1.25 × 104, and 1.35 × 104 M-1 and the Kapp values are 2.16 × 103, 8.34 × 103, and 9.0 × 103 M-1, from which it is difficult to infer the preference of groove binding over intercalation by these DNA trackers. However, the molecular docking experiments and viscosity measurement clearly indicate the preference for minor groove binding over intercalation, involving a change in Gibbs free energy of -8.56 kcal/mol. The 1•H2O complex was then evaluated for its anticancer potential in breast cancer MCF-7 cells, which severely abrogates the growth of the cells in both 2D and 3D mammospheres, indicating its promising application as an anticancer drug through a minor groove binding interaction with ct-DNA.
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Affiliation(s)
- Rousunara Khatun
- Department of Chemistry, Jadavpur University, 188, Raja S. C. Mullick Road, Kolkata, West Bengal 700 032, India
- Aliah University, ll-A/27, Action Area II, Newtown, Action Area II, Kolkata, West Bengal 700160, India
| | - Ritwik Modak
- Department of Chemistry, Manipal Academy of Higher Education, Manipal Institute of Technology Bengaluru, Manipal 560064, India
| | - Abu Saleh Musha Islam
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2B, Raja S.C. Mullick Road, Kolkata, West Bengal 700032, India
| | - Dolan Moni
- Department of Chemistry, Jadavpur University, 188, Raja S. C. Mullick Road, Kolkata, West Bengal 700 032, India
| | - Nayim Sepay
- Department of Chemistry, Lady Brabourne College, Kolkata, West Bengal 700 017, India
| | - Rimi Mukherjee
- Department of Signal Transduction and Biogenic Amines, Chittanranjan National Cancer Institute, 37, S.P. Mukherjee Road, Kolkata, West Bengal 700 026, India
| | - Gaurav Das
- Department of Signal Transduction and Biogenic Amines, Chittanranjan National Cancer Institute, 37, S.P. Mukherjee Road, Kolkata, West Bengal 700 026, India
| | - Nabendu Murmu
- Department of Signal Transduction and Biogenic Amines, Chittanranjan National Cancer Institute, 37, S.P. Mukherjee Road, Kolkata, West Bengal 700 026, India
| | - Mahammad Ali
- Department of Chemistry, Jadavpur University, 188, Raja S. C. Mullick Road, Kolkata, West Bengal 700 032, India
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Acharya P, Kuila A, Pramanik U, Hathwar VR, Brandao P, Mukherjee S, Maity S, Maity T, Maity R, Chandra Samanta B. Combined theoretical and experimental insights on DNA and BSA binding interactions of Cu(ii) and Ni(ii) complexes along with the DPPH method of antioxidant assay and cytotoxicity studies. RSC Adv 2023; 13:7632-7644. [PMID: 36908538 PMCID: PMC9993069 DOI: 10.1039/d2ra08341h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Accepted: 02/21/2023] [Indexed: 03/11/2023] Open
Abstract
This present study delineates the syntheses, detailed characterization and anti-proliferative potential against SiHa (cervical cancer cell) of two mononuclear complexes of Cu(ii) and Ni(ii) using a Schiff base ligand (L) derived from 2-hydroxybenzaldehyde and N-methyl-propane 1,3-diamine. The crystallographic results show the centro-symmetric space group of orthorhombic nature (Pccn) for Cu(ii) complex (1) where the central Cu(ii) has an inversion center symmetry with six co-ordinations resulting in a distorted octahedral geometry. Whereas, in complex (2), the two independent Ni(ii) atoms present in the special position within version symmetry and form a distorted geometry of octahedral nature with six coordinations. Absorption spectral titrations with Calf Thymus (CT) DNA and the extent of the decrease in relative emission intensities of DNA-bound ethidium bromide (EB) upon adding the complexes reveal the parallel trend in DNA binding affinities for both the complexes but with a small extent of binding capabilities. Bovine serum albumin (BSA) interaction studies demonstrate that complex 1 exhibits more promiscuous binding with BSA as compared to complex 2 from the spectroscopic and theoretical approaches. α,α-Diphenyl-β-picrylhydrazyl (DPPH) free radical scavenging method shows a little antioxidant or free radical scavenging activity for both the studied complexes. Cytotoxicity studies against SiHa expressed that the percentage of cell viability was reduced with time whereas in the same concentration and conditions, the viability percentage was higher for 3T3-L1 (several normal cell lines of mouse). The fluorescence imaging obtained from acridine orange (AO) and ethidium bromide (EtBr) demonstrates that the colour of the cancer cells has changed gradually dictating the cell apoptosis from day 1 to day 3.
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Affiliation(s)
- Prasun Acharya
- Department of Chemistry Mugberia Gangadhar Mahavidyalaya Bhupatinagar Purba Medinipur-721425 West Bengal India +91-3220-270236
| | - Arun Kuila
- Department of Chemistry Mugberia Gangadhar Mahavidyalaya Bhupatinagar Purba Medinipur-721425 West Bengal India +91-3220-270236
| | - Ushasi Pramanik
- Department of Chemistry, IISER Bhopal Bhopal Bypass Road, Bhauri Bhopal 462 066 Madhya Pradesh India
| | - Venkatesha R Hathwar
- School of Physical and Applied Sciences, Goa University Taleigao Plateau Goa 403 206 India
| | - Paula Brandao
- Departamento de Química, CICECO, Universidade de Aveiro 3810-193 Aveiro Portugal
| | - Saptarshi Mukherjee
- Department of Chemistry, IISER Bhopal Bhopal Bypass Road, Bhauri Bhopal 462 066 Madhya Pradesh India
| | - Swapan Maity
- School of Materials Science and Technology (SMST), Indian Institute of Technology (IIT), BHU India
| | - Tithi Maity
- Department of Chemistry, Prabhat Kumar College Purba Medinipur-721401 Contai West Bengal India
| | - Ribhu Maity
- Department of Chemistry Mugberia Gangadhar Mahavidyalaya Bhupatinagar Purba Medinipur-721425 West Bengal India +91-3220-270236
| | - Bidhan Chandra Samanta
- Department of Chemistry Mugberia Gangadhar Mahavidyalaya Bhupatinagar Purba Medinipur-721425 West Bengal India +91-3220-270236
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Sahoo DK, Dasgupta S, Kistwal T, Datta A. Fluorescence monitoring of binding of a Zn (II) complex of a Schiff base with human serum albumin. Int J Biol Macromol 2023; 226:1515-1522. [PMID: 36442551 DOI: 10.1016/j.ijbiomac.2022.11.263] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 11/19/2022] [Accepted: 11/24/2022] [Indexed: 11/27/2022]
Abstract
Zn (II) complexes of Schiff bases have potential applications in biomedical sciences as imaging agents, cancer therapeutics and diagnostics. Thus, it is important to understand their interaction with carrier proteins, like serum albumins. The present paper focuses on the binding interactions between Human serum albumin (HSA) and Znsalampy, making use of fluorescence spectroscopic techniques at ensemble as well as at single molecular level. An idea about the binding constant is obtained from the quenching of the single Trp (Tryptophan) residue of HSA by Znsalampy. Fluorescence correlation spectroscopy (FCS) has also been used to monitor the protein-ligand binding. The location of Znsalampy in its complex with HSA is determined by competitive binding experiments and molecular docking calculations. The binding constant obtained from the Znsalampy-HSA interaction falls in the ideal range for biological applications and the location is found to be in the proximity of Sudlow's site I. The esterase activity of HSA is retained in the presence of the Znsalampy. Hence, it is concluded that this Znsalampy may be a potential probe and biomarker in biomedical applications.
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Affiliation(s)
- Dipak Kumar Sahoo
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400 076, India
| | - Souradip Dasgupta
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400 076, India
| | - Tanuja Kistwal
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400 076, India
| | - Anindya Datta
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400 076, India.
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Bashir M, Yousuf I, Ahmad M, Arjmand F, Tabassum S. Synthesis, structural characterization and in vitro cytotoxicity assessment of new mononuclear Cu(II) and Co(II) complexes against MDA–MB–231, HCC–1806 and HT–29 cancer cell lines. Polyhedron 2023; 229:116189. [DOI: 10.1016/j.poly.2022.116189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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6
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Maity M, Pramanik U, Hathwar VR, Brandao P, Mukherjee S, Maity S, Maity R, Maity T, Chandra Samanta B. Biophysical insights into the binding capability of Cu(II) schiff base complex with BSA protein and cytotoxicity studies against SiHa. Heliyon 2022; 8:e11345. [DOI: 10.1016/j.heliyon.2022.e11345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 09/19/2022] [Accepted: 10/26/2022] [Indexed: 11/05/2022] Open
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Kürkçüoğlu GS, Yeşilel OZ, Sayın E, Şahin O. Nine new tetracyanometallate(II) complexes with 2-(2-aminoethyl)pyridine: synthesis, crystal structures and spectroscopic studies. J COORD CHEM 2022. [DOI: 10.1080/00958972.2022.2096449] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Güneş Süheyla Kürkçüoğlu
- Faculty of Science and Letters, Department of Physics, Eskişehir Osmangazi University, Eskişehir, Turkey
| | - Okan Zafer Yeşilel
- Faculty of Sciences and Letters, Department of Chemistry, Eskişehir Osmangazi University, Eskişehir, Turkey
| | - Elvan Sayın
- Turkish Standards Institution, Eskişehir Certification Directorate, Eskişehir, Turkey
| | - Onur Şahin
- Faculty of Health Sciences, Department of Occupat Health & Safety, Sinop University, Sinop, Turkey
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Bashir M, Yousuf I, Prakash Prasad C. Mixed Ni(II) and Co(II) complexes of nalidixic acid drug: Synthesis, characterization, DNA/BSA binding profile and in vitro cytotoxic evaluation against MDA-MB-231 and HepG2 cancer cell lines. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 271:120910. [PMID: 35077983 DOI: 10.1016/j.saa.2022.120910] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Revised: 01/06/2022] [Accepted: 01/15/2022] [Indexed: 06/14/2023]
Abstract
In this work, herein we report the synthesis, structural characterization and in vitro cytotoxic evaluation of two mixed Co(II)/Ni(II)-nalidixic acid-bipyridyl complexes (1 and 2). The structural analysis of metal complexes 1 and 2 was carried out by analytical and multispectroscopic techniques (FT-IR, UV-vis, EPR, sXRD). The crystallographic details of complexes 1 and 2 revealed a monoclinic crystal system with P21/c space group. DFT studies of complexes were performed to get electronic structure and localization of HOMO and LUMO electron densities. Hirshfeld surface analysis of metal complexes 1 and 2 was employed to understand the various intermolecular interactions (C-H···O, N-H···H and O-H···O) that define the stability of crystal lattice structures. The comparative interaction studies of complex 1 and complex 2 with DNA/BSA were performed by diverse multispectroscopic and analytical techniques to evaluate their chemotherapeutic potential. The magnitude of the DNA binding propensity and binding mode was verified by calculating Kb, K and Ksv values. Higher binding affinity was observed in case of complex 2via intercalative mode. Furthermore, the cytotoxic assessment of complexes 1 and 2 was examined against MDA-MB-231 (triple negative human breast cancer cell line) and HepG2 (liver carcinoma cell line) employing MTT assay which revealed remarkably effecient and specific cytotoxic activity of complex 2.
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Affiliation(s)
- Masrat Bashir
- Department of Chemistry, Aligarh Muslim University, Aligarh 202002, Uttar Pradesh, India
| | - Imtiyaz Yousuf
- Department of Chemistry, Aligarh Muslim University, Aligarh 202002, Uttar Pradesh, India.
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