Experimental Insights into the Electronic Nature, Spectral Features, and Role of Entropy in Short CH3···CH3 Hydrophobic Interactions

The Realm of Unconventional Noncovalent Interactions in Proteins: Their Significance in Structure and Function

Proteins and their assemblies are fundamental for living cells to function. Their complex three-dimensional architecture and its stability are attributed to the combined effect of various noncovalent interactions. It is critical to scrutinize these noncovalent interactions to understand their role in the energy landscape in folding, catalysis, and molecular recognition. This Review presents a comprehensive summary of unconventional noncovalent interactions, beyond conventional hydrogen bonds and hydrophobic interactions, which have gained prominence over the past decade. The noncovalent interactions discussed include low-barrier hydrogen bonds, C5 hydrogen bonds, C-H···π interactions, sulfur-mediated hydrogen bonds, n → π* interactions, London dispersion interactions, halogen bonds, chalcogen bonds, and tetrel bonds. This Review focuses on their chemical nature, interaction strength, and geometrical parameters obtained from X-ray crystallography, spectroscopy, bioinformatics, and computational chemistry. Also highlighted are their occurrence in proteins or their complexes and recent advances made toward understanding their role in biomolecular structure and function. Probing the chemical diversity of these interactions, we determined that the variable frequency of occurrence in proteins and the ability to synergize with one another are important not only for ab initio structure prediction but also to design proteins with new functionalities. A better understanding of these interactions will promote their utilization in designing and engineering ligands with potential therapeutic value.

Halogen Bond Induced Structural and Photophysical Properties Modification in Organic-Inorganic Hybrid Manganese Halides

The role of halogen bonding in organic-inorganic hybrid (OIH) halides was seldom investigated despite its potential to enhance the stability of the compound. In this context, we have synthesized (2-methylbenzimidazolium)MnCl₃(H₂O)·H₂O (compound 1) crystallizing in a monoclinic space group P2₁/c with a 1D infinite chain of edge shared Mn octahedra. In contrast, the chloro-substituted derivative (5-chloro-2-methylbenzimidazolium)₂MnCl₄ (compound 2) exhibits 0D Mn tetrahedra with a triclinic P1̅ structure. This structural modification from 1D Mn octahedra to 0D Mn tetrahedra involves a unique type-II halogen bonding between organic chlorine (C-Cl) and inorganic chloride (Cl-Mn) ions. Compound 1 exhibits red emission, whereas compound 2 demonstrates dual-band emission, resulting from energy transfer from the organic amine to Mn centers. To rationalize this interesting modulation in structure and photophysical properties, the role of halogen bonding is explored in terms of quantitative electron density analysis and intermolecular interaction energies.

The Relevance of Experimental Charge Density Analysis in Unraveling Noncovalent Interactions in Molecular Crystals

The work carried out by our research group over the last couple of decades in the context of quantitative crystal engineering involves the analysis of intermolecular interactions such as carbon (tetrel) bonding, pnicogen bonding, chalcogen bonding, and halogen bonding using experimental charge density methodology is reviewed. The focus is to extract electron density distribution in the intermolecular space and to obtain guidelines to evaluate the strength and directionality of such interactions towards the design of molecular crystals with desired properties. Following the early studies on halogen bonding interactions, several "sigma-hole" interaction types with similar electrostatic origins have been explored in recent times for their strength, origin, and structural consequences. These include interactions such as carbon (tetrel) bonding, pnicogen bonding, chalcogen bonding, and halogen bonding. Experimental X-ray charge density analysis has proved to be a powerful tool in unraveling the strength and electronic origin of such interactions, providing insights beyond the theoretical estimates from gas-phase molecular dimer calculations. In this mini-review, we outline some selected contributions from the X-ray charge density studies to the field of non-covalent interactions (NCIs) involving elements of the groups 14-17 of the periodic table. Quantitative insights into the nature of these interactions obtained from the experimental electron density distribution and subsequent topological analysis by the quantum theory of atoms in molecules (QTAIM) have been discussed. A few notable examples of weak interactions have been presented in terms of their experimental charge density features. These examples reveal not only the strength and beauty of X-ray charge density multipole modeling as an advanced structural chemistry tool but also its utility in providing experimental benchmarks for the theoretical studies of weak interactions in crystals.

Creating superhydrophobic, abrasion-resistant and breathable coatings from water-borne polydimethylsiloxane-polyurethane Co-polymer and fumed silica

HYPOTHESIS

The high surface area and branched structure of fumed silica (FS) can be exploited in concert with the hydrophobic properties of polydimethylsiloxane (PDMS) and robustness of polyurethane (PU) to create PDMS-PU and FS grafted coatings with hierarchical structures and enhanced functionalities. The structural features of FS would add to superhydrophobicity; its open-branchlike characteristics would provide air permeability; the use of a tiered coating approach involving a FS-only layer on top of the PDMS-PU coat would create interlocking and strong abrasion-resistance, leading to a multifunctional coating with potential application in filtration and personal protection equipment (PPE).

EXPERIMENTS

PDMS-PU and PDMS-PU-Si copolymer dispersions are synthesized with different monomer molecular weights and FS concentration. Hydrophobicity is measured via water contact angle and wetting resistance measurements. Abrasion resistance is compared by investigating the fiber morphology and hydrophobicity of the coated fabrics after various abrasion cycles. Air flow versus pressure drop experiments are used to measure breathability. Interaction mechanism between substrate/components are explored using infrared spectroscopy.

FINDINGS

The interactions between the substrate, FS, and PDMS-PU can be manipulated to create a novel, tiered coating that exhibits superhydrophobicity, strong abrasion resistance together with desirable air-permeability, thereby providing a versatile and unique coating platform.