1
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Jacobs E, Nguyen TV. N-Heterocyclic Carbenes and N-Heterocycles as Synthetic Reagents and Building Blocks. Chemistry 2025; 31:e202402339. [PMID: 39196604 DOI: 10.1002/chem.202402339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Revised: 08/26/2024] [Accepted: 08/28/2024] [Indexed: 08/29/2024]
Abstract
N-Heterocyclic carbenes (NHCs) have become important tools in modern synthetic chemistry due to their versatility as organocatalysts and ligands in organometallic complexes. Since their first isolation and characterization, NHCs have demonstrated significant utility in various catalytic processes, offering advantages such as strong σ-electron donation and the ability to stabilize reactive intermediates. However, beyond their well-documented roles in catalysis, the potential of NHCs as stoichiometric reagents and synthetic building blocks remains an underexplored yet promising area. This Mini-review aims to shed light on these lesser-known applications of NHCs and their N-heterocyclic precursors or derivatives in organic synthesis. Furthermore, we discuss how the unique electronic and steric properties of NHCs can be harnessed to develop new synthetic methodologies or construct interesting organic frameworks. By highlighting these emerging uses, we hope to encourage further research into the non-catalytic applications of NHCs, broadening their scope and impact in synthetic chemistry.
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Affiliation(s)
- Emily Jacobs
- School of Chemistry, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Thanh Vinh Nguyen
- School of Chemistry, University of New South Wales, Sydney, NSW, 2052, Australia
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2
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Gu C, So CM. Regio- and Chemoselective Palladium-Catalyzed Additive-Free Direct C─H Functionalization of Heterocycles with Chloroaryl Triflates Using Pyrazole-Alkyl Phosphine Ligands. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2309192. [PMID: 38482750 DOI: 10.1002/advs.202309192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 01/26/2024] [Indexed: 06/06/2024]
Abstract
A series of new pyrazole-alkyl phosphine ligands with varying cycloalkyl ring sizes that enable additive-free regio- and chemoselective C─H arylation of heterocycles are reported. Excellent α/β selectivity of various heterocycles such as benzo[b]thiophene, thiophene, furan, benzofuran, and thiazole can be achieved using these ligands, along with excellent chemoselectivity of C─Cl over C─OTf of chloroaryl triflates. Mechanistic studies supported by both experimental findings and density functional theory calculations indicate that the pyrazole phosphine ligands with optimal ring sizes allow the reaction to proceed with a lower energy barrier via a concerted metalation-deprotonation pathway.
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Affiliation(s)
- Changxue Gu
- State Key Laboratory of Chemical Biology and Drug Discovery and Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, P. R. China
| | - Chau Ming So
- State Key Laboratory of Chemical Biology and Drug Discovery and Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, P. R. China
- The Hong Kong Polytechnic University Shenzhen Research Institute, Shenzhen, 518000, P. R. China
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3
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Li W, Wu XF, Zhao Y. Mechanistic Insights into the Palladium-Catalyzed Perfluoroalkylative Carbonylation of Unactivated Alkenes to β-Perfluoroalkyl Esters: A DFT Study. J Phys Chem A 2024. [PMID: 38691449 DOI: 10.1021/acs.jpca.3c08287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2024]
Abstract
Transition metal-catalyzed multicomponent carbonylation is an efficient synthetic strategy to access multifunctional esters in high yields with broad functional group tolerance and good chemoselectivity. Considering the development of highly efficient synthetic methods for esters, it remains significant to grasp the mechanism of constructing multifunctional esters. Herein, density functional theoretical calculations were carried out to acquire mechanistic insight into the synthesis of β-perfluoroalkyl esters from a specific palladium-catalyzed perfluoroalkylative carbonylation of unactivated alkenes using carbon monoxide. A detailed mechanistic understanding of this reaction route includes (1) multistep radical reaction process, (2) C-C coupling and CO insertion, (3) ligand exchange, and (4) Pd-based intermediate oxidation and reductive elimination. The multistep radical process was fundamentally rationalized, including Rf· formation and radicals A and E from unactivated alkene and CO oxidation, respectively. The potential energy calculation indicated that the CO insertion into the perfluorinated alkyl radicals preceded Pd-catalyzed oxidation in the competitively multistep free radical reaction process. In addition, the I-/PhO- exchange step was predicted to be spontaneous to products. The IGMH analysis further attested to the reductive elimination process involved in the rate-determining step. Thus, a simple and valid density functional theory (DFT) approach was developed to reveal the multistep radical mechanism for the Pd-catalyzed perfluoroalkylative carbonylation of unactivated alkenes to access functional β-perfluoroalkyl esters.
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Affiliation(s)
- Wenbo Li
- School of Chemistry and Chemical Engineering, Zhejiang Sci-Tech University, Hangzhou 310018, China
| | - Xiao-Feng Wu
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, Liaoning, China
| | - Yanying Zhao
- School of Chemistry and Chemical Engineering, Zhejiang Sci-Tech University, Hangzhou 310018, China
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4
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Rodríguez-Franco C, Ros A, Merino P, Fernández R, Lassaletta JM, Hornillos V. Dynamic Kinetic Resolution of Indole-Based Sulfenylated Heterobiaryls by Rhodium-Catalyzed Atroposelective Reductive Aldol Reaction. ACS Catal 2023; 13:12134-12141. [PMID: 37745194 PMCID: PMC10513111 DOI: 10.1021/acscatal.3c03422] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Revised: 08/26/2023] [Indexed: 09/26/2023]
Abstract
A highly enantio- and diastereoselective dynamic kinetic resolution (DKR) of configurationally labile 3-aryl indole-2-carbaldehydes is described. The DKR proceeds via a Rh-catalyzed intermolecular asymmetric reductive aldol reaction with acrylate esters, with simultaneous generation of three stereogenic elements. The strategy relies on the labilization of the stereogenic axis that takes place thanks to a transient Lewis acid-base interaction (LABI) between the formyl group and a thioether moiety strategically located at the ortho' position. The atropisomeric indole products present a high degree of functionalization and can be further converted to a series of axially chiral derivatives, thereby expanding their potential application in drug discovery and asymmetric catalysis.
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Affiliation(s)
- Carlos Rodríguez-Franco
- Instituto
de Investigaciones Químicas (CSIC-US) and Centro de Innovación
en Química Avanzada (ORFEO−CINQA), Avda. Américo Vespucio, 49, 41092 Sevilla, Spain
| | - Abel Ros
- Instituto
de Investigaciones Químicas (CSIC-US) and Centro de Innovación
en Química Avanzada (ORFEO−CINQA), Avda. Américo Vespucio, 49, 41092 Sevilla, Spain
| | - Pedro Merino
- Instituto
de Biocomputación y Física de Sistemas Complejos (BIFI), Universidad de Zaragoza, 50009 Zaragoza, Spain
| | - Rosario Fernández
- Departamento
de Química Orgánica, Universidad
de Sevilla and Centro de Innovación en Química Avanzada
(ORFEO−CINQA), C/Prof. García González, 1, 41012 Sevilla, Spain
| | - José M. Lassaletta
- Instituto
de Investigaciones Químicas (CSIC-US) and Centro de Innovación
en Química Avanzada (ORFEO−CINQA), Avda. Américo Vespucio, 49, 41092 Sevilla, Spain
| | - Valentín Hornillos
- Instituto
de Investigaciones Químicas (CSIC-US) and Centro de Innovación
en Química Avanzada (ORFEO−CINQA), Avda. Américo Vespucio, 49, 41092 Sevilla, Spain
- Departamento
de Química Orgánica, Universidad
de Sevilla and Centro de Innovación en Química Avanzada
(ORFEO−CINQA), C/Prof. García González, 1, 41012 Sevilla, Spain
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5
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Pu X, Zhang Y, He X, Zhang X, Jiang L, Cao R, Kin Tse M, Qiu L. Synthesis of
N
‐Substituted 4‐Quinolones via Palladium‐Catalyzed Enantioselective C−N Coupling and Base‐Promoted Reactions. Adv Synth Catal 2023. [DOI: 10.1002/adsc.202300153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2023]
Affiliation(s)
- Xiaoyun Pu
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Yaqi Zhang
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Xiaobo He
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Xinhuan Zhang
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Long Jiang
- Instrumental Analysis and Research Centre Sun Yat-sen University Guangzhou 510275 China
| | - Rihui Cao
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Man Kin Tse
- Guangzhou Lee & Man Technology Company Limited 8 Huanshi Avenue South, Nansha Guangzhou 511458 People's Republic of China
| | - Liqin Qiu
- School of Chemistry Guangdong Provincial Key Laboratory of Chiral Molecules and Drug Discovery Sun Yat-sen University Guangzhou 510006 People's Republic of China
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Choppin S, Wencel-Delord J. Sulfoxide-Directed or 3d-Metal Catalyzed C-H Activation and Hypervalent Iodines as Tools for Atroposelective Synthesis. Acc Chem Res 2023; 56:189-202. [PMID: 36705934 DOI: 10.1021/acs.accounts.2c00573] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
ConspectusThe expanding applications of atropisomeric compounds combined with the growing diversity of such chiral molecules translate into an urgent need for innovative synthetic strategies allowing their rapid, efficient, and sustainable synthesis. Recently, the C-H activation approach has provided new opportunities for synthesizing axially chiral compounds. The two complementary approaches allowing implementation of the C-H activation methodology toward the synthesis of the chiral molecules imply either ortho-functionalization of the preexisting prochiral or atropo-unstable biaryl substrates or direct C-H arylation of sterically encumbered aromatics. The first approach required the preinstallation of a directing group on a biaryl precursor, which drastically limits the diversity of thus generated products. To tackle this important synthetic limitation, we have envisioned using a chiral sulfoxide as both directing group and chiral auxiliary. Indeed, in addition to efficiently coordinating the Pd-catalyst thus allowing chiral induction, the sulfoxide moiety can be easily removed, via the sulfoxide/lithium exchange, after the C-H activation step, thus guaranteeing an almost unlimited postdiversification of the atropisomeric products. The efficiency and generality of this concept could be illustrated by developing atropo-diastereoselective oxidative Heck reaction, direct acetoxylation, and iodination, as well as direct arylation. Besides, the synthetic utility of this methodology was demonstrated by designing an expedient synthesis of a direct steganone precursor. This unique transformation also allowed us to build up unprecedented triaryl scaffolds with two perfectly controlled chiral axes, original chiral skeletons for new ligand design. While considering the atroposelective direct arylations, the clear antagonism between the harsh reaction conditions frequently required for the coupling of two sterically hindered compounds and the atropo-stability of the new product, resulted in the scarcity of such transformations. To solve this fundamental challenge, we have focused on the application of a low-valent cobalt catalyst, prompted to catalyze C-H activation of indoles at the C2 position under extremely mild reaction conditions (room temperature). Accordingly, atroposelective C2-arylation of indoles could be achieved using an original carbene ligand and delivering the uncommon atropoisomerically pure indoles in excellent yields and enantioselectivities. Detailed combined experimental and theoretical mechanistic studies shed light on the mechanism of this transformation, providing strong evidence regarding the origin of the enantioselectivity. Finally, the antagonism between steric hindrance required to guarantee the atropo-stability of a molecule and harsh reaction conditions required to couple two partners is a strong limitation not only for the development of atroposelective C-H arylation reaction but also for the development of direct synthesis of the C-N axially chiral compounds. Despite the long history and incredible advances achieved in Ullmann-Goldberg and Buchwald-Hartwig couplings, atroposelective versions of such transformations have remained unprecedented until recently. Our idea to tackle this challenging issue consisted in using hypervalent iodines as highly reactive coupling partners, thus allowing the desired N-arylations to occur at room temperature. This hypothesis could be validated by reporting first atropo-diastereoselective Cu-catalyzed N-arylation, using sulfoxide λ3-iodanes as the coupling partners. Subsequently, the enantioselective version of this atroposelective N-arylation was successfully established by using a chiral Cu-complex bearing a BOX ligand. In conclusion, we report herein designing tailored-made solutions to provide new synthetic strategies to construct the atropisomeric molecules, including biaryls and C-N axially chiral molecules.
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Affiliation(s)
- Sabine Choppin
- Laboratoire d'Innovation Moléculaire et Applications (UMR CNRS 7042), Université de Strasbourg/Université de Haute Alsace, ECPM. 25 rue Becquerel, 67087 Strasbourg, France
| | - Joanna Wencel-Delord
- Laboratoire d'Innovation Moléculaire et Applications (UMR CNRS 7042), Université de Strasbourg/Université de Haute Alsace, ECPM. 25 rue Becquerel, 67087 Strasbourg, France
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7
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Wang Y, Yan J, Jiang Y, Wei Z, Tu Z, Dong C, Lu T, Chen Y, Feng J. Atroposelective Amination of Indoles via Chiral Center Induced Chiral Axis Formation. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27249008. [PMID: 36558141 PMCID: PMC9783779 DOI: 10.3390/molecules27249008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 12/09/2022] [Accepted: 12/11/2022] [Indexed: 12/24/2022]
Abstract
The construction of an N-C chiral axis for N-aryl indole derivatives is meaningful as they widely exist in functionalized molecules. This work provides a novel method for this purpose via amination of amino acid derivatives at the C2 position of the indole and chiral center induced chiral axis formation. The protocol of this transformation is easily accessible, not requiring metal or an organic chiral catalyst, endowing this method with great potential in the construction of axis chiral N-aryl indoles.
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8
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Lu T, Chen Q. Independent gradient model based on Hirshfeld partition: A new method for visual study of interactions in chemical systems. J Comput Chem 2022; 43:539-555. [PMID: 35108407 DOI: 10.1002/jcc.26812] [Citation(s) in RCA: 803] [Impact Index Per Article: 267.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 01/06/2022] [Accepted: 01/16/2022] [Indexed: 01/10/2023]
Abstract
The powerful independent gradient model (IGM) method has been increasingly popular in visual analysis of intramolecular and intermolecular interactions in recent years. However, we frequently observed that there is an evident shortcoming of IGM map in graphically studying weak interactions, that is its isosurfaces are usually too bulgy; in these cases, not only the graphical effect is poor, but also the color on some areas on the isosurfaces is inappropriate and may lead to erroneous analysis conclusions. In addition, the IGM method was originally proposed based on promolecular density, which is quite crude and does not take actual electronic structure into account. In this article, we propose an improvement version of IGM, namely IGM based on Hirshfeld partition of molecular density (IGMH), which replaces the free-state atomic densities involved in the IGM method with the atomic densities derived by Hirshfeld partition of actual molecular electron density. This change makes IGM have more rigorous physical background. A large number of application examples in this article, including molecular and periodic systems, weak and chemical bond interactions, fully demonstrate the important value of IGMH in intuitively understanding interactions in chemical systems. Comparisons also showed that the IGMH usually has markedly better graphical effect than IGM and overcomes known problems in IGM. Currently IGMH analysis has been supported in our wavefunction analysis code Multiwfn (http://sobereva.com/multiwfn). We hope that IGMH will become a new useful method among chemists for exploring interactions in wide variety of chemical systems.
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Affiliation(s)
- Tian Lu
- Beijing Kein Research Center for Natural Sciences, Beijing, China
| | - Qinxue Chen
- Beijing Kein Research Center for Natural Sciences, Beijing, China
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