1
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Wang ZL, Zhu R. Controlled chain-growth polymerization via propargyl/allenyl palladium intermediates. Nat Commun 2025; 16:2506. [PMID: 40082432 PMCID: PMC11907067 DOI: 10.1038/s41467-025-57723-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2024] [Accepted: 02/28/2025] [Indexed: 03/16/2025] Open
Abstract
In contrast to allyl palladium complexes, propargylic/allenylic palladium species display complex reactivities that limit their implementation in polymer chemistry, especially for chain-growth polymerizations. Here we report an example of controlled chain-growth polymerization via propargyl/allenyl palladium intermediates. Vinylidenecyclopropane 1,1-dicarboxylate (VDCP), a unique allenylic electrophile, selectively reacts via the σ-allenyl palladium complex rather than the more common π-propargyl pathway, thereby unlocking a chain-growth process. Based on this concept, precise synthesis of alkyne-backbone polymers is realized, featuring fast rate, high molecular weight, narrow dispersity, high chemoselectivity, and excellent end-group fidelity. We demonstrate preparation of unsaturated macromolecules with advanced sequences and architectures using this method, including block, gradient, and graft copolymers.
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Affiliation(s)
- Zheng-Lin Wang
- Beijing National Laboratory of Molecular Sciences (BNLMS), Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing, China
| | - Rong Zhu
- Beijing National Laboratory of Molecular Sciences (BNLMS), Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing, China.
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2
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Jiang H, Yu M, Zhang S, Jin L, Zhang Y, Huang X. Palladium-Catalyzed Intermolecular 1,3-Dienylation of Propargyl Esters Involving the Insertion of SO 2. Org Lett 2025; 27:2220-2227. [PMID: 39978934 DOI: 10.1021/acs.orglett.5c00334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2025]
Abstract
A palladium-catalyzed three-component 1,3-dienylation of propargylic esters with DABSO and aryl iodides has been developed. This novel reductive cross-coupling reaction produces 2-sufonylated 1,3-dienes as single products in the presence of reductive metal Mn with high regio- and chemoselectivities. Control experiments demonstrated that the transformation may undergo a radical process.
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Affiliation(s)
- Haohao Jiang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Mengzhao Yu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Shuoshuo Zhang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Ling Jin
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Yue Zhang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Xiaolei Huang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Materials Science, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
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3
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Gan MQ, Zhu JX, Chen ZC, Du W, Chen YC. Palladium-Catalyzed Divergent Synthesis from o-Sulfonamido Trifluoroacetophenones and 2-En-4-ynyl Carbonates. Org Lett 2025; 27:1989-1993. [PMID: 39954293 DOI: 10.1021/acs.orglett.5c00269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2025]
Abstract
Here we present a palladium-catalyzed divergent transformative reaction between o-sulfonamido trifluoroacetophenones and 2-en-4-ynyl carbonates. A spectrum of enantioenriched 2,5-dihydrofuran-fused tetrahydroquinolines bearing either a (Z)- or (E)-exocyclic double bond are constructed with moderate to high enantioselectivity from 5-aryl-substituted carbonates by tuning palladium sources, while analogous 2,3-dihydrofuran-fused products are furnished by using 5-alkyl-substituted ones.
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Affiliation(s)
- Meng-Qi Gan
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Jian-Xiang Zhu
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Zhi-Chao Chen
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Wei Du
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Ying-Chun Chen
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
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4
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He ZL, Li L, Chen ZC, Du W, Chen YC. Palladium-catalysed asymmetric cascade transformations of 4-alken-2-ynyl carbonates to construct complex frameworks. Chem Sci 2025; 16:3124-3129. [PMID: 39829975 PMCID: PMC11737346 DOI: 10.1039/d4sc07823c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2024] [Accepted: 12/23/2024] [Indexed: 01/22/2025] Open
Abstract
As a class of readily available and multifunctional building blocks, the chemistry of 4-alken-2-ynyl carbonates remains to be explored. Presented herein is a palladium-catalysed cascade transformative reaction between 4-alken-2-ynyl carbonates and ortho-functionalised activated alkenes. Achiral 1,1-bisalkyl-4-alken-2-ynyl carbonates undergo highly regioselective propargylic substitution with ortho-hydroxyphenyl-tethered activated alkenes, and an auto-tandem vinylogous addition, unusual central-carbon Tsuji-Trost alkylation, protonation and β-H elimination process is followed to furnish fused and spirocyclic frameworks with high structural complexity. Even kinetic transformations with racemic 1-monoalkylated 4-alken-2-ynyl carbonates can be accomplished in the assemblies with ortho-aminophenyl-tethered activated alkenes to afford the analogous alkaloid architectures. This palladium-catalysed auto-tandem protocol exhibits excellent chemo-, regio-, stereoselectivity and reaction efficacy, and substantial functionality compatibility is also observed.
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Affiliation(s)
- Ze-Liang He
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University Chengdu 610041 China +86 28 85502609
| | - Li Li
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University Chengdu 610041 China +86 28 85502609
| | - Zhi-Chao Chen
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University Chengdu 610041 China +86 28 85502609
| | - Wei Du
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University Chengdu 610041 China +86 28 85502609
| | - Ying-Chun Chen
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University Chengdu 610041 China +86 28 85502609
- College of Pharmacy, Third Military Medical University Shapingba Chongqing 400038 China
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5
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Connor AO, O'Broin CQ, Bruno-Colmenarez J, Guiry PJ. Synthesis and Application of Chiral 2-Amido and 1-Phenyl-2-amido Dienes in Diels-Alder Reactions to Access Chiral Cyclic Ketones. J Org Chem 2024; 89:16325-16339. [PMID: 39499868 PMCID: PMC11574853 DOI: 10.1021/acs.joc.4c00689] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2024]
Abstract
The preparation of a focused library of chiral 2-amido and 2-amido-1-phenyl-1,3-dienes from a range of chiral oxazolidinones using palladium-catalysis is reported. This palladium-catalyzed carbon-nitrogen bond-forming reaction provides the corresponding chiral amido-dienes in moderate to excellent yields (12 examples, up to 97%). The resulting chiral amido-dienes are employed as novel dienes in Diels-Alder (DA) reactions (58 examples, up to 93:7 dr, up to 70% yield). A range of chiral cyclic ketones were accessed upon hydrolysis, affording products with high levels of enantioselectivity (up to 92% ee, up to 81% yield).
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Affiliation(s)
- Aoibheann O' Connor
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Calvin Q O'Broin
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Julia Bruno-Colmenarez
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Patrick J Guiry
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
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6
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Zhao Z, Zhu L, Song ZL, Qubi K, Ouyang Q, Du W, Chen YC. Nickel-Catalyzed Asymmetric (3 + 2) Annulations of Propargylic Carbonates and Vinylogous Donors via an Alkenylation Pathway. J Am Chem Soc 2024; 146:30678-30685. [PMID: 39439091 DOI: 10.1021/jacs.4c12664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2024]
Abstract
The transition-metal-catalyzed alkenylation strategy of propargylic alcohol derivatives provides an efficient protocol to access multifunctional products in a double-nucleophilic attack pattern. While limited relevant asymmetric examples have been reported via palladium catalysis, here we first demonstrate that a nonprecious Ni(0)-based chiral complex can efficiently promote the tandem substitution process between propargylic carbonates and N-trifluoroethyl ketimines via consecutive aza-vinylogous activations, finally accomplishing a (3 + 2) annulation reaction to afford products embedding a 4-methylene-3,4-dihydro-2H-pyrrole framework with high regio-, diastereo-, and enantiocontrol. Their assemblies with a few all-carbon-based vinylogous precursors are also successful, and enantioenriched adducts containing a 3-methylenecyclopentene scaffold are furnished effectively. The substitution patterns for both types of substrates are substantial, and an array of synthetic elaborations is conducted to deliver more versatile architectures with high application potential. In addition, density functional theory calculations and control experiments have been conducted to rationalize the catalytic pathways and regio- and enantioselectivity control.
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Affiliation(s)
- Zhi Zhao
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Lei Zhu
- College of Pharmacy, Third Military Medical University, Shapingba, Chongqing 400038, China
| | - Zhao-Li Song
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Keji Qubi
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Qin Ouyang
- College of Pharmacy, Third Military Medical University, Shapingba, Chongqing 400038, China
| | - Wei Du
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Ying-Chun Chen
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- College of Pharmacy, Third Military Medical University, Shapingba, Chongqing 400038, China
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7
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Xu J, Ge Z, Ding K, Wang X. Rh(II)/Pd(0) Dual-Catalyzed Regio-Divergent Three-Component Propargylic Substitution. JACS AU 2023; 3:2862-2872. [PMID: 37885573 PMCID: PMC10598837 DOI: 10.1021/jacsau.3c00415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 08/30/2023] [Accepted: 08/30/2023] [Indexed: 10/28/2023]
Abstract
Regio-divergent propargylic substitution to generate functionally diverse products from identical starting materials remains a formidable challenge, probably due to the unpredictable regiochemical complexity. In practically, the synthesis of α-quaternary propargylic-substituted products is still much less developed, and preprepared nucleophiles are generally applied in this type of reaction with propargylic substrates, which limits the reaction efficiency and diversity of the obtained products. Herein, we disclose unprecedented three-component propargylic substitution of α-diazo esters with amines and propargylic carbonates under dirhodium/palladium dual catalysis. The key to the success of this multicomponent propargylic substitution is to avoid two-component side reactions through a tandem process of dirhodium(II)-catalyzed carbene insertion and palladium-catalyzed regiodivergent propargylic substitution. The judicious selection of a diphosphine (dppf) or monophosphine (tBuBrettphos) as the ligand is crucial for the reaction to generate different products in a switchable way, α-quaternary 1,3-dienyl or propargylated products, with high regio- and chemoselectivities.
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Affiliation(s)
- Jie Xu
- Department
of Chemistry, University of Science and
Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
- State
Key Laboratory of Organometallic Chemistry, Center for Excellence
in Molecular Synthesis, Shanghai Institute
of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Zhaoliang Ge
- State
Key Laboratory of Organometallic Chemistry, Center for Excellence
in Molecular Synthesis, Shanghai Institute
of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Kuiling Ding
- Department
of Chemistry, University of Science and
Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
- State
Key Laboratory of Organometallic Chemistry, Center for Excellence
in Molecular Synthesis, Shanghai Institute
of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
- Frontier
Science Center for Transformative Molecules, School of Chemistry and
Chemical Engineering, Shanghai Jiao Tong
University, 800 Dongchuan
Road, Shanghai 200240, China
| | - Xiaoming Wang
- State
Key Laboratory of Organometallic Chemistry, Center for Excellence
in Molecular Synthesis, Shanghai Institute
of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
- School
of Chemistry and Materials Science, Hangzhou Institute for Advanced
Study, University of Chinese Academy of
Sciences, 1 Sub-lane
Xiangshan, Hangzhou 310024, China
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8
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Sun Z, Dai M, Ding C, Chen S, Chen LA. Regiodivergent and Stereoselective Synthesis of Highly Substituted 1,3-Dienes via Arylative Acyloxy Migration of Propargyl Esters. J Am Chem Soc 2023; 145:18115-18125. [PMID: 37525426 DOI: 10.1021/jacs.3c06253] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/02/2023]
Abstract
We report the first catalyst-controlled regiodivergent method that enables the synthesis of structurally diverse 1,2,3,4-tetrasubstituted conjugated dienes with excellent regio- and stereochemical outcomes from the same set of readily available propargyl esters and diaryliodonium salts. In this diene chemistry, the in situ generated, highly electrophilic aryl-CuIII complex serves not only as a π-Lewis acid catalyst for alkyne activation/acyloxy migration but also as an aryl electrophile equivalent. The competitive arylative 1,2- and 1,3-acyloxy migration patterns are exquisitely dictated by Cu and Au/Cu relay catalyses, respectively, providing a modular and attractive approach to traditionally inaccessible tetrasubstituted 1,3-dienes in a regiodivergent manner. Finally, the synthetic utility of this method is demonstrated by further synthetic derivatization of 1,3-dienes into an array of useful compounds.
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Affiliation(s)
- Zhimin Sun
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, China
| | - Mengfu Dai
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, China
| | - Chencheng Ding
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, China
| | - Shiqin Chen
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, China
| | - Liang-An Chen
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, China
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9
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Song Y, Wu C, Zhang J, Zhang W, Qin X, Yang Y, Kang G, Jiang J, Liu H. Switchable multipath cascade cyclization to synthesize bicyclic lactams and succinimides via chemodivergent reaction. Chem Commun (Camb) 2023; 59:3313-3316. [PMID: 36852458 DOI: 10.1039/d2cc06841a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2023]
Abstract
Herein, a novel switchable multipath cascade cyclization via chemodivergent reaction between readily available ketoamides and deconjugated butenolides was developed to efficiently synthesize γ-lactone fused γ-lactams and succinimide fused hemiketals. The Aldol/aza-Michael reaction and Aldol/imidation/hemiketalization reaction were enabled by catalytic amounts of two bases, namely tetramethyl guanidine and NaOAc. A wide range of substrate scope with diverse functional group compatibility was demonstrated to deliver the corresponding products with good yield and excellent diastereoselectivity (>60 examples).
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Affiliation(s)
- Yimei Song
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Chaofei Wu
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Jinhai Zhang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Wenhai Zhang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Xin Qin
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Yixiao Yang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Guowei Kang
- Department of Chemistry, The Scripps Research Institute, North Torrey Pines Road, La Jolla 10550, USA.
| | - Jun Jiang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China.
| | - Hongxin Liu
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China. .,Institute of New Materials & Industrial Technology, Wenzhou University, Wenzhou, 325035, China.
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10
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Zhu XQ, Wang Q, Zhu J. Organocatalytic Enantioselective Diels-Alder Reaction of 2-Trifluoroacetamido-1,3-dienes with α,β-Unsaturated Ketones. Angew Chem Int Ed Engl 2023; 62:e202214925. [PMID: 36347807 DOI: 10.1002/anie.202214925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Indexed: 11/11/2022]
Abstract
We report herein the first examples of chiral phosphoric acid-catalyzed enantioselective Diels-Alder reactions between 2-trifluoroacetamido-1,3-dienes 1 and α,β-unsaturated carbonyl compounds 2. Polysubstituted 1-acetamido cyclohexenes 3 were formed in high yields with excellent diastereo- and enantioselectivities. The reaction proceeds through a stepwise process as shown by deuterium labelling experiments. A catalytic enantioselective three-component reaction of 1, 2 and ortho-hydroxybenzhydryl alcohols 4 was subsequently developed furnishing the densely functionalized hexahydroxanthenes 5 in a highly stereoselective manner. This multicomponent reaction generates four chemical bonds with concurrent creation of five contiguous stereocenters.
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Affiliation(s)
- Xin-Qi Zhu
- Laboratory of Synthesis and Natural Products (LSPN), Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
| | - Qian Wang
- Laboratory of Synthesis and Natural Products (LSPN), Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
| | - Jieping Zhu
- Laboratory of Synthesis and Natural Products (LSPN), Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
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11
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Röhrig UF, Majjigapu SR, Vogel P, Reynaud A, Pojer F, Dilek N, Reichenbach P, Ascenção K, Irving M, Coukos G, Michielin O, Zoete V. Structure-based optimization of type III indoleamine 2,3-dioxygenase 1 (IDO1) inhibitors. J Enzyme Inhib Med Chem 2022; 37:1773-1811. [PMID: 35758198 PMCID: PMC9246256 DOI: 10.1080/14756366.2022.2089665] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
The haem enzyme indoleamine 2,3-dioxygenase 1 (IDO1) catalyses the rate-limiting step in the kynurenine pathway of tryptophan metabolism and plays an essential role in immunity, neuronal function, and ageing. Expression of IDO1 in cancer cells results in the suppression of an immune response, and therefore IDO1 inhibitors have been developed for use in anti-cancer immunotherapy. Here, we report an extension of our previously described highly efficient haem-binding 1,2,3-triazole and 1,2,4-triazole inhibitor series, the best compound having both enzymatic and cellular IC50 values of 34 nM. We provide enzymatic inhibition data for almost 100 new compounds and X-ray diffraction data for one compound in complex with IDO1. Structural and computational studies explain the dramatic drop in activity upon extension to pocket B, which has been observed in diverse haem-binding inhibitor scaffolds. Our data provides important insights for future IDO1 inhibitor design.
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Affiliation(s)
- Ute F Röhrig
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland
| | - Somi Reddy Majjigapu
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland.,Laboratory of Glycochemistry and Asymmetric Synthesis, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Pierre Vogel
- Laboratory of Glycochemistry and Asymmetric Synthesis, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Aline Reynaud
- Protein Production and Structure Core Facility, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Florence Pojer
- Protein Production and Structure Core Facility, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Nahzli Dilek
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland
| | - Patrick Reichenbach
- Department of Oncology UNIL-CHUV, Ludwig Lausanne Branch, Epalinges, Switzerland
| | - Kelly Ascenção
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland
| | - Melita Irving
- Department of Oncology UNIL-CHUV, Ludwig Lausanne Branch, Epalinges, Switzerland
| | - George Coukos
- Department of Oncology UNIL-CHUV, Ludwig Lausanne Branch, Epalinges, Switzerland
| | - Olivier Michielin
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland.,Department of Oncology, University Hospital of Lausanne (CHUV), Ludwig Cancer Research-Lausanne Branch, Lausanne, CH-1011, Switzerland
| | - Vincent Zoete
- SIB Swiss Institute of Bioinformatics, Molecular Modeling Group, Lausanne, Switzerland.,Department of Oncology UNIL-CHUV, Ludwig Lausanne Branch, Epalinges, Switzerland
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12
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Zechovský J, Kertész E, Kremláček V, Hejda M, Mikysek T, Erben M, Růžička A, Jambor R, Benkő Z, Dostál L. Exploring Differences between Bis(aldimino)- and amino-aldimino- N, C, N-Pincer-Stabilized Pnictinidenes: Limits of Synthesis, Structure, and Reversible Tautomerization-Controlled Oxidation. Organometallics 2022. [DOI: 10.1021/acs.organomet.2c00236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jan Zechovský
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Erik Kertész
- Department of Inorganic and Analytical Chemistry, Budapest University of Technology and Economics, Szent Gellért tér 4, H-1111 Budapest, Hungary
| | - Vít Kremláček
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Martin Hejda
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Tomáš Mikysek
- Department of Analytical Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Milan Erben
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Aleš Růžička
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Roman Jambor
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
| | - Zoltán Benkő
- Department of Inorganic and Analytical Chemistry and ELKH-BME Computation Driven Chemistry Research Group, Budapest University of Technology and Economics, Szent Gellért tér 4, H-1111 Budapest, Hungary
| | - Libor Dostál
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, CZ 532 10 Pardubice, Czech Republic
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13
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Dai M, Sun Z, Chen L. Palladium‐Catalyzed Regiodivergent Synthesis of 1,3‐Dienyl and Allyl Esters from Propargyl Esters. Angew Chem Int Ed Engl 2022; 61:e202203835. [DOI: 10.1002/anie.202203835] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Indexed: 01/03/2023]
Affiliation(s)
- Mengfu Dai
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
| | - Zhimin Sun
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
| | - Liang‐An Chen
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
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14
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Barišić D, Lešić F, Tireli Vlašić M, Užarević K, Bregović N, Tomišić V. Anion binding by receptors containing NH donating groups – What do anions prefer? Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.132875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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15
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Dai M, Sun Z, Chen L. Palladium‐Catalyzed Regiodivergent Synthesis of 1,3‐Dienyl and Allyl Esters from Propargyl Esters. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Mengfu Dai
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
| | - Zhimin Sun
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
| | - Liang‐An Chen
- Jiangsu Collaborative Innovation Center of Biomedical Functional Materials and Key Laboratory of Biofunctional Materials of Jiangsu Province School of Chemistry and Materials Science Nanjing Normal University Nanjing 210023 P. R. China
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16
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Sontakke GS, Shukla RK, Volla CMR. Rh(I)‐Catalyzed Decarboxylative Arylation of Alkynyl Cyclic Carbonates: Divergent Access to Substituted
α
‐Allenols and 1,3‐Butadienes. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202101064] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
| | - Rahul K. Shukla
- Department of Chemistry Indian Institute of Technology Bombay Powai Mumbai-400076 India
| | - Chandra M. R. Volla
- Department of Chemistry Indian Institute of Technology Bombay Powai Mumbai-400076 India
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17
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Steverlynck J, Sitdikov R, Rueping M. The Deuterated "Magic Methyl" Group: A Guide to Site-Selective Trideuteromethyl Incorporation and Labeling by Using CD 3 Reagents. Chemistry 2021; 27:11751-11772. [PMID: 34076925 PMCID: PMC8457246 DOI: 10.1002/chem.202101179] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Indexed: 12/12/2022]
Abstract
In the field of medicinal chemistry, the precise installation of a trideuteromethyl group is gaining ever-increasing attention. Site-selective incorporation of the deuterated "magic methyl" group can provide profound pharmacological benefits and can be considered an important tool for drug optimization and development. This review provides a structured overview, according to trideuteromethylation reagent, of currently established methods for site-selective trideuteromethylation of carbon atoms. In addition to CD3 , the selective introduction of CD2 H and CDH2 groups is also considered. For all methods, the corresponding mechanism and scope are discussed whenever reported. As such, this review can be a starting point for synthetic chemists to further advance trideuteromethylation methodologies. At the same time, this review aims to be a guide for medicinal chemists, offering them the available C-CD3 formation strategies for the preparation of new or modified drugs.
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Affiliation(s)
- Joost Steverlynck
- Kaust Catalysis Center (KCC)King Abdullah University Science and Technology (KAUST)Thuwal23955-6900Saudi Arabia
| | - Ruzal Sitdikov
- Kaust Catalysis Center (KCC)King Abdullah University Science and Technology (KAUST)Thuwal23955-6900Saudi Arabia
| | - Magnus Rueping
- Kaust Catalysis Center (KCC)King Abdullah University Science and Technology (KAUST)Thuwal23955-6900Saudi Arabia
- Institute for Experimental Molecular ImagingRWTH Aachen UniversityForckenbeckstrasse 5552074Aachen
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18
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Huang YK, Zhang WZ, Zhang K, Wang WL, Lu XB. Carbon dioxide-promoted palladium-catalyzed dehydration of primary allylic alcohols: access to substituted 1,3-dienes. Org Chem Front 2021. [DOI: 10.1039/d0qo01465f] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
A carbon dioxide promoted dehydration reaction of primary allylic alcohols gives synthetically important substituted 1,3-dienes in good yields under milder conditions compared with the reaction using a heterogeneous catalyst or carbon monoxide.
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Affiliation(s)
- Yan-Kai Huang
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology
- Dalian
- P. R. China
| | - Wen-Zhen Zhang
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology
- Dalian
- P. R. China
| | - Ke Zhang
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology
- Dalian
- P. R. China
| | - Wen-Le Wang
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology
- Dalian
- P. R. China
| | - Xiao-Bing Lu
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology
- Dalian
- P. R. China
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19
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Barlow SR, Callaghan LJ, Franckevičius V. Investigation of the palladium-catalysed cyclisation of α-amido malonates with propargylic compounds. Tetrahedron 2021. [DOI: 10.1016/j.tet.2020.131866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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20
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Ishida N, Murakami M, Kamino Y. Nickel-Catalyzed α-1,3-Dienylation of 1,3-Dicarbonyl Compounds with Propargylic Carbonates. Synlett 2020. [DOI: 10.1055/a-1282-9731] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
AbstractHerein reported is a nickel-catalyzed α-1,3-dienylation reaction of 1,3-dicarbonyl compounds with substituted propargylic (e.g., but-2-ynyl) carbonates. The propargyl unit changes into a 1,3-dienyl unit, which is incorporated at the α-position of the 1,3-dicarbonyl compounds.
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Affiliation(s)
| | - Masahiro Murakami
- Department of Synthetic Chemistry and Biological Chemistry, Kyoto University
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21
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O’Broin CQ, Guiry PJ. Advances in Decarboxylative Palladium-Catalyzed Reactions of Propargyl Electrophiles. J Org Chem 2020; 85:10321-10333. [DOI: 10.1021/acs.joc.0c01218] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Calvin Q. O’Broin
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Patrick J. Guiry
- Centre for Synthesis and Chemical Biology, School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
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