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Wang WL, Zhang ZC, Huang SY, Zhong HY, Ni BL, Sun WM. Transformation of Distinct Superatoms to Superalkalis by Successive Ligation of Thymine Nucleobases. J Phys Chem A 2025; 129:1673-1681. [PMID: 39880839 DOI: 10.1021/acs.jpca.4c08440] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2025]
Abstract
The ligation strategy has been widely used in the chemical synthesis of atomically precise clusters. A series of thymine (T)-ligated Al12M-Tn (M = Be, Al, C; n = 1-5) complexes have been studied to reveal the effect of DNA nucleobase ligands on the electronic structures of different superatoms in the present work. In addition to its protective role, the successive attachment of thymine ligands significantly lowers the adiabatic ionization energies (AIEs) of the studied Al12M superatoms with filled and unfilled electronic shells. The continuous decrease in the AIEs of Al12M-Tn is derived from the gradually raised highest occupied molecular orbital (HOMO) levels upon the addition of ligands. Interestingly, the lowering degree of AIEs for such nucleobase-protected superatoms is independent of the distinct shell fillings of Al12M superatoms but is significantly related to the types of nucleobases. Moreover, the obtained Al12M-T5 superalkalis not only exhibit excellent performance in activating the stable CO2 and O2 molecules but also have considerable nonlinear optical (NLO) responses. We, therefore, hope that this study could provide a viable strategy for synthesizing novel nucleobase-ligated superatom clusters with excellent reducing capability to enrich the family of multifunctional nanoclusters.
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Affiliation(s)
- Wen-Lu Wang
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
| | - Zhi-Chao Zhang
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
| | - Shu-Ying Huang
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
| | - Hai-Yan Zhong
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
| | - Bi-Lian Ni
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
| | - Wei-Ming Sun
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350108, People's Republic of China
- School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
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Ye YL, Zhang ZC, Ni BL, Yu D, Chen JH, Sun WM. Theoretical prediction of superatom WSi 12-based catalysts for CO oxidation by N 2O. Phys Chem Chem Phys 2023; 25:32525-32533. [PMID: 37997746 DOI: 10.1039/d3cp05363f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023]
Abstract
Catalytic conversion of N2O and CO into nonharmful gases is of great significance to reduce their adverse impact on the environment. The potential of the WSi12 superatom to serve as a new cluster catalyst for CO oxidation by N2O is examined for the first time. It is found that WSi12 prefers to adsorb the N2O molecule rather than the CO molecule, and the charge transfer from WSi12 to N2O results in the full activation of N2O into a physically absorbed N2 molecule and an activated oxygen atom that is attached to an edge of the hexagonal prism structure of WSi12. After the release of N2, the remaining oxygen atom can oxidize one CO molecule via overcoming a rate-limiting barrier of 28.19 kcal mol-1. By replacing the central W atom with Cr and Mo, the resulting MSi12 (M = Cr and Mo) superatoms exhibit catalytic performance for CO oxidation comparable to the parent WSi12. In particular, the catalytic ability of WSi12 for CO oxidation is well maintained when it is extended into tube-like WnSi6(n+1) (n = 2, 4, and 6) clusters with energy barriers of 25.63-29.50 kcal mol-1. Moreover, all these studied MSi12 (M = Cr, Mo, and W) and WnSi6(n+1) (n = 2, 4, and 6) species have high structural stability and can absorb sunlight to drive the catalytic process. This study not only opens a new door for the atomically precise design of new silicon-based nanoscale catalysts for various chemical reactions but also provides useful atomic-scale insights into the size effect of such catalysts in heterogeneous catalysis.
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Affiliation(s)
- Ya-Ling Ye
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian, 350108, People's Republic of China.
- Department of Pharmacy, Nanping First Hospital Affiliated to Fujian Medical University, Nanping, Fujian, 353006, People's Republic of China
| | - Zhi-Chao Zhang
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian, 350108, People's Republic of China.
| | - Bi-Lian Ni
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian, 350108, People's Republic of China.
| | - Dan Yu
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, 510006, People's Republic of China
| | - Jing-Hua Chen
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian, 350108, People's Republic of China.
| | - Wei-Ming Sun
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, Higher Educational Key Laboratory for Nano Biomedical Technology of Fujian Province, The School of Pharmacy, Fujian Medical University, Fuzhou, Fujian, 350108, People's Republic of China.
- School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, People's Republic of China
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Zhang L, Cheng X, Li XH, Chen JH, Sun WM. A DFT study on the adsorption behavior of antiviral Favipiravir drug on B N (n = 12, 16, 20, and 24) nanocages: The size effect. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119388] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Zhang L, Qi ZD, Ye YL, Li XH, Chen JH, Sun WM. DFT study on the adsorption of 5-fluorouracil on B 40, B 39M, and M@B 40 (M = Mg, Al, Si, Mn, Cu, Zn). RSC Adv 2021; 11:39508-39517. [PMID: 35492488 PMCID: PMC9044419 DOI: 10.1039/d1ra08308b] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 12/03/2021] [Indexed: 01/02/2023] Open
Abstract
Based on density functional theory, the adsorption behavior of 5-fluorouracil (5-Fu) on B40 and its derivatives has been explored. It was observed that 5-Fu prefers to combine with the corner boron atom of the B40 cage via one of its oxygen atoms, forming a strong polar covalent B-O bond. The adsorption energy of 5-Fu on B40 was calculated to be -11.15 kcal mol-1, and thus, it can be duly released from B40 by protonation in the slightly acidic environment of tumor tissue, which makes for reducing the toxic and side effects of this drug. Additionally, the substituent and embedding effect of Mg, Al, Si, Mn, Cu, and Zn atoms on the drug delivery performance of B40 have been also considered. We hope this work could offer some implications for the potential application of boron-based nanomaterials, such as B40 in drug delivery.
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Affiliation(s)
- Li Zhang
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, The School of Pharmacy, Fujian Medical University Fuzhou 350108 People's Republic of China
| | - Zi-Dan Qi
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, The School of Pharmacy, Fujian Medical University Fuzhou 350108 People's Republic of China
| | - Ya-Ling Ye
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, The School of Pharmacy, Fujian Medical University Fuzhou 350108 People's Republic of China
| | - Xiang-Hui Li
- The School of Medical Technology and Engineering, Fujian Medical University Fuzhou 350004 Fujian People's Republic of China
- Key Laboratory of OptoElectronic Science and Technology for Medicine of Ministry of Education, Fujian Provincial Key Laboratory of Photonics Technology, Fujian Normal University Fuzhou 350007 Fujian People's Republic of China
| | - Jing-Hua Chen
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, The School of Pharmacy, Fujian Medical University Fuzhou 350108 People's Republic of China
| | - Wei-Ming Sun
- Fujian Key Laboratory of Drug Target Discovery and Structural and Functional Research, The School of Pharmacy, Fujian Medical University Fuzhou 350108 People's Republic of China
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Zhang L, Ye YL, Li XH, Chen JH, Sun WM. On the potential of all-boron fullerene B40 as a carrier for anti-cancer drug nitrosourea. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.117533] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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