Study of Membrane Protein Monolayers Using Surface-Enhanced Infrared Absorption Spectroscopy (SEIRAS): Critical Dependence of Nanostructured Gold Surface Morphology

Key Structure Parameters for Designing High-Performance Substrates of Surface-Enhanced Infrared Absorption Spectroelectrochemistry

Attenuated total reflectance surface-enhanced infrared absorption spectroscopy (ATR-SEIRAS) plays a crucial role in understanding the interfacial reaction mechanisms at the molecular level, achieving an enhancement factor (EF) of up to 103. However, when this technique is integrated with electrochemistry (EC-ATR-SEIRAS), the EF is significantly reduced by ten- to hundred-fold. Thus, understanding of the key parameters that contribute to the EF is of great importance in designing high-performance substrates and extending the application for EC-SEIRAS. In this study, we propose that the structure of the substrate for EC-ATR-SEIRAS consists of an enhancement unit (EU) supported on a conductivity unit (CU). The CU will screen the incident IR light reaching and interacting with the EU, resulting in a smaller EF as the CU thickness increases. Then, we introduce a strategy to optimize the performance of the EC-SEIRAS substrate by assembling a plasmonic antenna array as the EU that is supported on IR-transparent and conductive monolayer graphene as the CU. The established plasmon-enhanced EC-SEIRAS substrate demonstrates much higher IR enhancement, repeatability, and stability.

Electrocatalysis of CO2 Reduction by Immobilized Formate Dehydrogenase without a Metal Redox Center

Nicotinamide adenine dinucleotide-dependent formate dehydrogenase from Candida boidinii was immobilized in a 1,2-dimyristoyl-sn-glycero-3-phosphocholine/cholesterol floating lipid bilayer on the gold surface as a biocatalyst for electrochemical CO2 reduction. We report that, in contrast to common belief, the enzyme can catalyze the electrochemical reduction of CO2 to formate without the cofactor protonated nicotinamide adenine dinucleotide. The electrochemical data indicate that the enzyme-catalyzed reduction of CO2 is diffusion-controlled and is a reversible reaction. The orientation and conformation of the enzyme were investigated by surface-enhanced infrared reflection absorption spectroscopy. The α-helix of the enzyme adopts an orientation nearly parallel to the surface, bringing its active center close to the gold surface. This orientation allows direct electron transfer between CO2 and the gold electrode. The results in this paper provide a new method for the development of enzymatic electrocatalysts for CO2 reduction.

A super asymmetric cross antenna structure with tunable dual-frequency resonances

The detection performance of traditional infrared spectroscopy can be very limited in the case of molecular vibrational modes with low absorption cross-sections. On account of its electric field enhancement, plasmonic antenna can be combined with infrared spectroscopy to realize surface enhanced infrared detection and characterization of molecules. In this work, a super asymmetric cross antenna structure with tunable dual-frequency resonance and a high enhancement factor is designed. By systematically studying the transmission spectrum and charge distribution of this super asymmetric cross antenna structure, the physical origin of the dual-frequency resonance and its tunability are characterized in detail. In addition, in order to target desired molecular ensembles, the relationship between the resonance frequency and electric-field intensity of the two resonance modes and the parameters of structure and incident light are examined, yielding an enhancement factor close to 100 in the desired frequency region. Finally, the experimental results show that the proposed super asymmetric cross antenna structure can indeed generate dual-frequency resonances, agreeing reasonably with the theoretical results. It is believed that the super asymmetric cross antenna structure can be widely used to sensitively detect trace molecules, and in monolayered chemistry and bio-molecules, allowing their structures and dynamics to be studied using nonlinear infrared spectroscopy.

Towards multi-molecular surface-enhanced infrared absorption using metal plasmonics

Surface-enhanced infrared absorption (SEIRA) leads to a largely improved detection of polar molecules, compared to standard infrared absorption. The enhancement principle is based on localized surface plasmon resonances of the substrate, which match the frequency of molecular vibrations in the analyte of interest. Therefore, in practical terms, the SEIRA sensor needs to be tailored to each specific analyte. We review SEIRA sensors based on metal plasmonics for the detection of biomolecules such as DNA, proteins, and lipids. We further focus this review on chemical SEIRA sensors, with potential applications in quality control, as well as on the improvement in sensor geometry that led to the development of multiresonant SEIRA substrates as sensors for multiple analytes. Finally, we give an introduction into the integration of SEIRA sensors with surface-enhanced Raman scattering (SERS).

Label-Free Physical Techniques and Methodologies for Proteins Detection in Microfluidic Biosensor Structures

Proteins in biological fluids (blood, urine, cerebrospinal fluid) are important biomarkers of various pathological conditions. Protein biomarkers detection and quantification have been proven to be an indispensable diagnostic tool in clinical practice. There is a growing tendency towards using portable diagnostic biosensor devices for point-of-care (POC) analysis based on microfluidic technology as an alternative to conventional laboratory protein assays. In contrast to universally accepted analytical methods involving protein labeling, label-free approaches often allow the development of biosensors with minimal requirements for sample preparation by omitting expensive labelling reagents. The aim of the present work is to review the variety of physical label-free techniques of protein detection and characterization which are suitable for application in micro-fluidic structures and analyze the technological and material aspects of label-free biosensors that implement these methods. The most widely used optical and impedance spectroscopy techniques: absorption, fluorescence, surface plasmon resonance, Raman scattering, and interferometry, as well as new trends in photonics are reviewed. The challenges of materials selection, surfaces tailoring in microfluidic structures, and enhancement of the sensitivity and miniaturization of biosensor systems are discussed. The review provides an overview for current advances and future trends in microfluidics integrated technologies for label-free protein biomarkers detection and discusses existing challenges and a way towards novel solutions.

Plasmonic Resonant Nanoantennas Induce Changes in the Shape and the Intensity of Infrared Spectra of Phospholipids

Surface enhanced infrared absorption spectroscopic studies (SEIRAS) as a technique to study biological molecules in extremely low concentrations is greatly evolving. In order to use the technique for identification of the structure and interactions of such biological molecules, it is necessary to identify the effects of the plasmonic electric-field enhancement on the spectral signature. In this study the spectral properties of 1,2-Dipalmitoyl-sn-glycero-3 phosphothioethanol (DPPTE) phospholipid immobilized on gold nanoantennas, specifically designed to enhance the vibrational fingerprints of lipid molecules were studied. An AFM study demonstrates an organization of the DPPTE phospholipid in bilayers on the nanoantenna structure. The spectral data were compared to SEIRAS active gold surfaces based on nanoparticles, plain gold and plain substrate (Si) for different temperatures. The shape of the infrared signals, the peak positions and their relative intensities were found to be sensitive to the type of surface and the presence of an enhancement. The strongest shifts in position and intensity were seen for the nanoantennas, and a smaller effect was seen for the DPPTE immobilized on gold nanoparticles. This information is crucial for interpretation of data obtained for biological molecules measured on such structures, for future application in nanodevices for biologically or medically relevant samples.

Optimization of Solid-State Fermentation Extraction of Inonotus hispidus Fruiting Body Melanin

Melanin has good nutritional and medicinal value; however, its extraction rate is extremely low. This study explored the edible and medicinal fungus Inonotus hispidus fruiting body melanin (IHFM) extraction process and solid-state fermentation conditions. The results showed that the best way to extract IHFM is the compound enzymatic method, with complex enzyme 26.63 mg/g, liquid material ratio 5:1, enzymatic hydrolysis 80 min, pH 4.61, and enzymolysis temperature at 36.07 °C. The yield of IHFM was 23.73 ± 0.57%, which was equivalent to 1.27 times before optimization. The best solid medium formula was normal pH, rice 20 g per cultivation bottle, maltose 22 g/L, beef extract 4.4 g/L, carbon-nitrogen ratio 5:1, and liquid-to-material ratio 1.1:1, where the IHFM yield was 31.80 ± 1.34%, which was equivalent to 1.7 times that before optimization. In summary, solid-state fermentation and extraction optimization greatly improved the yield of melanin, provided a reference to produce melanin, and laid a foundation for the development and utilization of melanin.