1
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Glasovac Z, Margetić D, Antol I. Molecular and Electronic Structure and Properties of the Single Benzene-Based Fluorophores Containing Guanidine Subunit. J Comput Chem 2025; 46:e70054. [PMID: 39901350 PMCID: PMC11791125 DOI: 10.1002/jcc.70054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2024] [Revised: 01/15/2025] [Accepted: 01/17/2025] [Indexed: 02/05/2025]
Abstract
The Gibbs energies of protonation (ΔGp) and the basic photophysical properties for single-benzene fluorophores (SBFs) containing guanidine and/or amino subunits and the changes that occur upon protonation were modeled by the TDDFT approach. The calculated ΔGp energies for amino SBFs in the S1 state range from 985 to 1100 kJ mol-1 which are below the values for guanidines. The protonation of the guanidine-SBFs induces a hypsochromic shift of the absorption and the emission maxima with the Stokes shift of > 100 nm in both cases. Isomerization through the ESIPT process is less probable than in amino-SBFs due to the unfavorable thermodynamics. Still, if it occurs, it leads to a strong red shift of the emission by > 150 nm. Aromaticity indices point to strong antiaromatic character of the examined guanidino-SBFs in the FC region which decreases upon geometrical relaxation and ESIPT. The excited state proton transfer occurs in guanidine-SBF/phenol complexes in the S1 state, stabilizing CT states and fluorescence quenching.
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Affiliation(s)
- Zoran Glasovac
- Division of Organic Chemistry and BiochemistryRuđer Bošković InstituteZagrebCroatia
| | - Davor Margetić
- Division of Organic Chemistry and BiochemistryRuđer Bošković InstituteZagrebCroatia
| | - Ivana Antol
- Division of Organic Chemistry and BiochemistryRuđer Bošković InstituteZagrebCroatia
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2
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Ripoll C, Del Campo-Balguerías A, Alonso-Moreno C, Herrera-Ochoa D, Ocaña A, Martín C, Garzón-Ruíz A, Bravo I. Fluorescence lifetime nanothermometer based on the equilibrium formation of anthracene AIE-excimers in living cells. J Colloid Interface Sci 2024; 674:186-193. [PMID: 38925064 DOI: 10.1016/j.jcis.2024.06.157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 06/14/2024] [Accepted: 06/22/2024] [Indexed: 06/28/2024]
Abstract
The effective measurement of temperature in living systems at the nano and microscopic scales continues to be a challenge to this day. Here, we study the use of 2-(anthracen-2-yl)-1,3-diisopropylguanidine, 1, as a nanothermometer based on fluorescence lifetime measurements and its bioimaging applications. In aqueous solution, 1 is shown in aggregated form and the equilibrium between the two main aggregate types (T-shaped and π-π) is highly sensitive to the temperature. The heating of the medium shifts the equilibrium toward the formation of highly emissive T-shaped aggregates. This species shows a high fluorescence emission and a long lifetime in comparison with the π-π aggregates and the freé monomer. A linear relationship between the fluorescence lifetime and the temperature both in aqueous solution and in a synthetic intracellular buffer was found. Fluorescence lifetime imaging microscopy (FLIM) also showed a linear relationship between lifetime and temperature with an excellent sensitivity in MCF7 breast cancer cells, which opens the door for its potential use as FLIM nanothermometer in the biomedical field.
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Affiliation(s)
- Consuelo Ripoll
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química-Física, Grupo FOTOAIR, 02008 Albacete, Spain
| | - Almudena Del Campo-Balguerías
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química Orgánica, Inorgánica Y Bioquímica, Grupo ORCAST, 02008 Albacete, Spain
| | - Carlos Alonso-Moreno
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química Orgánica, Inorgánica Y Bioquímica, Grupo ORCAST, 02008 Albacete, Spain; Centro de Innovación En Química Avanzada (ORFEO-CINQA), Universidad de Castilla-La Mancha. 02008 Albacete, Spain
| | - Diego Herrera-Ochoa
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química-Física, Grupo FOTOAIR, 02008 Albacete, Spain
| | - Alberto Ocaña
- Experimental Therapeutics Unit, Hospital Clínico San Carlos, IdISSC and CIBERONC, Madrid, Spain; START Phase I Unit, Hospital Fundación Jiménez Díaz, Madrid
| | - Cristina Martín
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química-Física, Grupo FOTOAIR, 02008 Albacete, Spain
| | - Andrés Garzón-Ruíz
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química-Física, Grupo FOTOAIR, 02008 Albacete, Spain.
| | - Iván Bravo
- Universidad de Castilla-La Mancha, Unidad nanoDrug. Facultad de Farmacia, Albacete-02008, Spain; Universidad de Castilla-La Mancha, Departamento de Química-Física, Grupo FOTOAIR, 02008 Albacete, Spain.
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3
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Bąk KM, Trzaskowski B, Chmielewski MJ. Anion-templated synthesis of a switchable fluorescent [2]catenane with sulfate sensing capability. Chem Sci 2024; 15:1796-1809. [PMID: 38303949 PMCID: PMC10829038 DOI: 10.1039/d3sc05086f] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 12/16/2023] [Indexed: 02/03/2024] Open
Abstract
Anion templation strategies have facilitated the synthesis of various catenane and rotaxane hosts capable of strong and selective binding of anions in competitive solvents. However, this approach has primarily relied on positively charged precursors, limiting the structural diversity and the range of potential applications of the anion-templated mechanically interlocked molecules. Here we demonstrate the synthesis of a rare electroneutral [2]catenane using a powerful, doubly charged sulfate template and a complementary diamidocarbazole-based hydrogen bonding precursor. Owing to the unique three-dimensional hydrogen bonding cavity and the embedded carbazole fluorophores, the resulting catenane receptor functions as a sensitive fluorescent turn-ON sensor for the highly hydrophilic sulfate, even in the presence of a large excess of water. Importantly, the [2]catenane exhibits enhanced binding affinity and selectivity for sulfate over its parent macrocycle and other acyclic diamidocarbazole-based receptors. We demonstrate also, for the first time, that the co-conformation of the catenane may be controlled by reversible acid/base induced protonation and deprotonation of the anionic template, SO42-. This approach pioneers a new strategy to induce molecular motion of interlocked components using switchable anionic templates.
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Affiliation(s)
- Krzysztof M Bąk
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
| | - Bartosz Trzaskowski
- Centre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland
| | - Michał J Chmielewski
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
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4
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Pacheco-Liñán P, Alonso-Moreno C, Ocaña A, Ripoll C, García-Gil E, Garzón-Ruíz A, Herrera-Ochoa D, Blas-Gómez S, Cohen B, Bravo I. Formation of Highly Emissive Anthracene Excimers for Aggregation-Induced Emission/Self-Assembly Directed (Bio)imaging. ACS APPLIED MATERIALS & INTERFACES 2023; 15:44786-44795. [PMID: 37699547 PMCID: PMC11165449 DOI: 10.1021/acsami.3c10823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 08/30/2023] [Indexed: 09/14/2023]
Abstract
AIEgens have emerged as a promising alternative to molecular rotors in bioimaging applications. However, transferring the concept of aggregation-induced emission (AIE) from solution to living systems remains a challenge. Given the highly heterogeneous nature and the compartmentalization of the cell, different approaches are needed to control the self-assembly within the crowded intricate cellular environment. Herein, we report for the first time the self-assembly mechanism of an anthracene-guanidine derivative (AG) forming the rare and highly emissive T-shaped dimer in breast cancer cell lines as a proof of concept. This process is highly sensitive to the local environment in terms of polarity, viscosity, and/or water quantity that should enable the use of the AG as a fluorescence lifetime imaging biosensor for intracellular imaging of cellular structures and the monitoring of intracellular state parameters. Different populations of the monomer and T-shaped and π-π dimers were observed in the cell membrane, cytoplasm, and nucleoplasm, related to the local viscosity and presence of water. The T-shaped dimer is formed preferentially in the nucleus because of the higher density and viscosity compared to the cytoplasm. The present results should serve as a precursor for the development of new design strategies for molecular systems for a wide range of applications such as cell viscosity, density, or temperature sensing and imaging.
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Affiliation(s)
- Pedro
J. Pacheco-Liñán
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
| | - Carlos Alonso-Moreno
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
- Centro
Regional de Investigaciones Biomédicas (CRIB), 02008 Albacete, Spain
- Centro
de Innovación en Química Avanzada (ORFEO-CINQA), Universidad de Castilla-La Mancha, 02008 Albacete, Spain
| | - Alberto Ocaña
- Experimental
Therapeutics Unit, Hospital clínico
San Carlos, IdISSC and CIBERONC, 28040 Madrid, Spain
- Unidad
de Investigación del Complejo Hospitalario Universitario de
Albacete. Oncología Traslacional, 02008 Albacete, Spain
| | - Consuelo Ripoll
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
| | - Elena García-Gil
- Unidad
de Investigación del Complejo Hospitalario Universitario de
Albacete. Oncología Traslacional, 02008 Albacete, Spain
| | - Andrés Garzón-Ruíz
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
| | - Diego Herrera-Ochoa
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
| | - Sofía Blas-Gómez
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
| | - Boiko Cohen
- Departamento
de Química Física, Facultad de Ciencias Ambientales
y Bioquímica, and Instituto de Nanociencia, Nanotecnología
y Materiales Moleculares (INAMOL), Universidad
de Castilla-La Mancha, Avenida Carlos III, S/N, 45071 Toledo, Spain
| | - Iván Bravo
- Unidad
nanoDrug. Facultad de Farmacia de Albacete, Universidad de Castilla-La
Mancha, 02008 Albacete, Spain
- Centro
Regional de Investigaciones Biomédicas (CRIB), 02008 Albacete, Spain
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5
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Wu H, He Y, Deng H, Liang Y, Xiang L, Tang X, Li X, Yuan Z, Lin B, Chen S, Zhang J. 7-Guanidinyl Coumarins: Synthesis, Photophysical Properties, and Application to Exploit the Pd-Catalyzed Release of Guanidines. J Org Chem 2023; 88:11504-11513. [PMID: 37549384 DOI: 10.1021/acs.joc.3c00660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/09/2023]
Abstract
Molecular manipulation of guanidino-containing biomolecules in a cellular environment is fundamental to exploiting protein function and drug release, but currently, there is a lack of suitable methods for reaction screening and monitoring. To exploit the potential of the fluorescent method in this respect, herein, we evaluated a novel array of 7-guanidinyl coumarins by incorporating different substituted guanidino moieties into a coumarin scaffold. These compounds were prepared by guanidinylation reagent S-methylisothiourea or TFA-protected pyrazole-carboxamidine. Examination of their photophysical properties revealed that the fluorescence emission of alkyloxycarbonyl-substituted guanidinyl coumarin was significantly enhanced as compared with the unsubstituted analogue. This dramatic fluorescence difference enabled preliminary exploitation of the Pd-catalyzed release of allyloxycarbonyl (Alloc)-caged guanidinyl coumarin-6 in living cells.
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Affiliation(s)
- Haiting Wu
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Yiting He
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Huiying Deng
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Yunshi Liang
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Lingling Xiang
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Xueping Tang
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Xueying Li
- Science and Technology Innovation Center, Guangzhou University of Chinese Medicine, Guangdong 510405, China
| | - Zhijun Yuan
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Bohong Lin
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
| | - Song Chen
- Science and Technology Innovation Center, Guangzhou University of Chinese Medicine, Guangdong 510405, China
| | - Jing Zhang
- Artemisinin Research Center & The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou 510405, China
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6
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Mechanistic DFT Study of 1,3-Dipolar Cycloadditions of Azides with Guanidine. Molecules 2023; 28:molecules28052342. [PMID: 36903588 PMCID: PMC10004754 DOI: 10.3390/molecules28052342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 02/22/2023] [Accepted: 02/28/2023] [Indexed: 03/06/2023] Open
Abstract
Density functional calculations SMD(chloroform)//B3LYP/6-311+G(2d,p) were employed in the computational study of 1,3-dipolar cycloadditions of azides with guanidine. The formation of two regioisomeric tetrazoles and their rearrangement to cyclic aziridines and open-chain guanidine products were modeled. The results suggest the feasibility of an uncatalyzed reaction under very drastic conditions since the thermodynamically preferred reaction path (a), which involves cycloaddition by binding the carbon atom from guanidine to the terminal azide nitrogen atom, and the guanidine imino nitrogen with the inner N atom from the azide, has an energy barrier higher than 50 kcal mol-1. The formation of the other regioisomeric tetrazole (imino nitrogen interacts with terminal N atom of azide) in direction (b) can be more favorable and proceed under milder conditions if alternative activation of the nitrogen molecule releases (e.g., photochemical activation), or deamination could be achieved because these processes have the highest barrier in the less favorable (b) branch of the mechanism. The introduction of substituents should favorably affect the cycloaddition reactivity of the azides, with the greatest effects expected for the benzyl and perfluorophenyl groups.
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7
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Novel indole-guanidine hybrids as potential anticancer agents: Design, synthesis and biological evaluation. Chem Biol Interact 2022; 368:110242. [DOI: 10.1016/j.cbi.2022.110242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 09/24/2022] [Accepted: 10/24/2022] [Indexed: 11/17/2022]
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8
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Ramos A, Carrillo-Hermosilla F, Fernández-Galán R, Elorriaga D, Naranjo J, Antiñolo A, García-Vivó D. ZnEt 2 as a Precatalyst for the Addition of Alcohols to Carbodiimides. Organometallics 2022; 41:2949-2957. [DOI: 10.1021/acs.organomet.2c00372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Indexed: 11/15/2022]
Affiliation(s)
- Alberto Ramos
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - Fernando Carrillo-Hermosilla
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - Rafael Fernández-Galán
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - David Elorriaga
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - Jesús Naranjo
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - Antonio Antiñolo
- Departamento de Química Inorgánica, Orgánica y Bioquímica-Centro de Innovación en Química Avanzada (ORFEO−CINQA). Universidad de Castilla-La Mancha, Campus Universitario, E-13071Ciudad Real, Spain
| | - Daniel García-Vivó
- Departamento de Química Orgánica e Inorgánica/IUQOEM, Universidad de Oviedo, E-33071Oviedo, Spain
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