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Scheibel DM, Gitsov IPI, Gitsov I. Enzymes in "Green" Synthetic Chemistry: Laccase and Lipase. Molecules 2024; 29:989. [PMID: 38474502 DOI: 10.3390/molecules29050989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 02/14/2024] [Accepted: 02/22/2024] [Indexed: 03/14/2024] Open
Abstract
Enzymes play an important role in numerous natural processes and are increasingly being utilized as environmentally friendly substitutes and alternatives to many common catalysts. Their essential advantages are high catalytic efficiency, substrate specificity, minimal formation of byproducts, and low energy demand. All of these benefits make enzymes highly desirable targets of academic research and industrial development. This review has the modest aim of briefly overviewing the classification, mechanism of action, basic kinetics and reaction condition effects that are common across all six enzyme classes. Special attention is devoted to immobilization strategies as the main tools to improve the resistance to environmental stress factors (temperature, pH and solvents) and prolong the catalytic lifecycle of these biocatalysts. The advantages and drawbacks of methods such as macromolecular crosslinking, solid scaffold carriers, entrapment, and surface modification (covalent and physical) are discussed and illustrated using numerous examples. Among the hundreds and possibly thousands of known and recently discovered enzymes, hydrolases and oxidoreductases are distinguished by their relative availability, stability, and wide use in synthetic applications, which include pharmaceutics, food and beverage treatments, environmental clean-up, and polymerizations. Two representatives of those groups-laccase (an oxidoreductase) and lipase (a hydrolase)-are discussed at length, including their structure, catalytic mechanism, and diverse usage. Objective representation of the current status and emerging trends are provided in the main conclusions.
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Affiliation(s)
- Dieter M Scheibel
- Department of Chemistry, State University of New York-ESF, Syracuse, NY 13210, USA
| | - Ioan Pavel Ivanov Gitsov
- Science and Technology, Medtronic Incorporated, 710 Medtronic Parkway, Minneapolis, MN 55432, USA
| | - Ivan Gitsov
- Department of Chemistry, State University of New York-ESF, Syracuse, NY 13210, USA
- The Michael M. Szwarc Polymer Research Institute, Syracuse, NY 13210, USA
- Biomedical and Chemical Engineering Department, Syracuse University, Syracuse, NY 13210, USA
- BioInspired Institute, Syracuse, NY 13210, USA
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Single enzyme nanoparticle, an effective tool for enzyme replacement therapy. Arch Pharm Res 2020; 43:1-21. [PMID: 31989476 DOI: 10.1007/s12272-020-01216-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 01/20/2020] [Indexed: 01/10/2023]
Abstract
The term "single enzyme nanoparticle" (SEN) refers to a chemically or biologically engineered single enzyme molecule. SENs are distinguished from conventional protein nanoparticles in that they can maintain their individual structure and enzymatic activity following modification. Furthermore, SENs exhibit enhanced properties as biopharmaceuticals, such as reduced antigenicity, and increased stability and targetability, which are attributed to the introduction of specific moieties, such as poly(ethylene glycol), carbohydrates, and antibodies. Enzyme replacement therapy (ERT) is a crucial therapeutic option for controlling enzyme-deficiency-related disorders. However, the unfavorable properties of enzymes, including immunogenicity, lack of targetability, and instability, can undermine the clinical significance of ERT. As shown in the cases of Adagen®, Revcovi®, Palynziq®, and Strensiq®, SEN can be an effective technology for overcoming these obstacles. Based on these four licensed products, we expect that additional SENs will be introduced for ERT in the near future. In this article, we review the concepts and features of SENs, as well as their preparation methods. Additionally, we summarize different types of enzyme deficiency disorders and the corresponding therapeutic enzymes. Finally, we focus on the current status of SENs in ERT by reviewing FDA-approved products.
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Yeow J, Chapman R, Gormley AJ, Boyer C. Up in the air: oxygen tolerance in controlled/living radical polymerisation. Chem Soc Rev 2018; 47:4357-4387. [PMID: 29718038 PMCID: PMC9857479 DOI: 10.1039/c7cs00587c] [Citation(s) in RCA: 247] [Impact Index Per Article: 41.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The requirement for deoxygenation in controlled/living radical polymerisation (CLRP) places significant limitations on its widespread implementation by necessitating the use of large reaction volumes, sealed reaction vessels as well as requiring access to specialised equipment such as a glove box and/or inert gas source. As a result, in recent years there has been intense interest in developing strategies for overcoming the effects of oxygen inhibition in CLRP and therefore remove the necessity for deoxygenation. In this review, we highlight several strategies for achieving oxygen tolerant CLRP including: "polymerising through" oxygen, enzyme mediated deoxygenation and the continuous regeneration of a redox-active catalyst. In order to provide further clarity to the field, we also establish some basic parameters for evaluating the degree of "oxygen tolerance" that can be achieved using a given oxygen scrubbing strategy. Finally, we propose some applications that could most benefit from the implementation of oxygen tolerant CLRP and provide a perspective on the future direction of this field.
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Affiliation(s)
- Jonathan Yeow
- Centre for Advanced Macromolecular Design (CAMD), UNSW Australia, Sydney, NSW 2052, Australia.,Australian Centre for NanoMedicine, UNSW Australia, Sydney, NSW 2052, Australia
| | - Robert Chapman
- Centre for Advanced Macromolecular Design (CAMD), UNSW Australia, Sydney, NSW 2052, Australia.,Australian Centre for NanoMedicine, UNSW Australia, Sydney, NSW 2052, Australia
| | - Adam J. Gormley
- Department of Biomedical Engineering, Rutgers University, NJ, USA
| | - Cyrille Boyer
- Centre for Advanced Macromolecular Design (CAMD), UNSW Australia, Sydney, NSW 2052, Australia.,Australian Centre for NanoMedicine, UNSW Australia, Sydney, NSW 2052, Australia
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Zhang Y, Wang Q, Hess H. Increasing Enzyme Cascade Throughput by pH-Engineering the Microenvironment of Individual Enzymes. ACS Catal 2017. [DOI: 10.1021/acscatal.6b03431] [Citation(s) in RCA: 84] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Yifei Zhang
- Department
of Biomedical Engineering, Columbia University, New York, New York 10027, United States
| | - Qin Wang
- Department
of Biomedical Engineering, Tsinghua University, Beijing 100084, China
| | - Henry Hess
- Department
of Biomedical Engineering, Columbia University, New York, New York 10027, United States
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Cobo I, Li M, Sumerlin BS, Perrier S. Smart hybrid materials by conjugation of responsive polymers to biomacromolecules. NATURE MATERIALS 2015; 14:143-59. [PMID: 25401924 DOI: 10.1038/nmat4106] [Citation(s) in RCA: 420] [Impact Index Per Article: 46.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2013] [Accepted: 09/04/2014] [Indexed: 05/18/2023]
Abstract
The chemical structure and function of biomacromolecules has evolved to fill many essential roles in biological systems. More specifically, proteins, peptides, nucleic acids and polysaccharides serve as vital structural components, and mediate chemical transformations and energy/information storage processes required to sustain life. In many cases, the properties and applications of biological macromolecules can be further expanded by attaching synthetic macromolecules. The modification of biomacromolecules by attaching a polymer that changes its properties in response to environmental variations, thus affecting the properties of the biomacromolecule, has led to the emergence of a new family of polymeric biomaterials. Here, we summarize techniques for conjugating responsive polymers to biomacromolecules and highlight applications of these bioconjugates reported so far. In doing so, we aim to show how advances in synthetic tools could lead to rapid expansion in the variety and uses of responsive bioconjugates.
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Affiliation(s)
- Isidro Cobo
- Key Centre for Polymers &Colloids, School of Chemistry, The University of Sydney, New South Wales 2006, Australia
| | - Ming Li
- Tyco Fire Protection Products, Mansfield, Texas 76063, USA
| | - Brent S Sumerlin
- George &Josephine Butler Polymer Research Laboratory, Center for Macromolecular Science &Engineering, Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, USA
| | - Sébastien Perrier
- 1] Department of Chemistry, The University of Warwick, Coventry CV4 7AL, UK [2] Faculty of Pharmacy and Pharmaceutical Sciences, Monash University, 381 Royal Parade, Parkville, Victoria 3052, Australia
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Miyamoto D, Watanabe J, Ishihara K. Molecular design of reactive amphiphilic phospholipid polymer for bioconjugation with an enzyme. J Appl Polym Sci 2004. [DOI: 10.1002/app.21339] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Miyamoto D, Watanabe J, Ishihara K. Effect of water-soluble phospholipid polymers conjugated with papain on the enzymatic stability. Biomaterials 2004; 25:71-6. [PMID: 14580910 DOI: 10.1016/s0142-9612(03)00474-5] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
To maintain enzymatic activity during long-term storage by conjugation with water-soluble 2-methacryloyloxyethyl phosphorylcholine (MPC) polymers (PMPC-COOH) having various molecular weights with a carboxylic group on the terminal, such compounds were synthesized as a polymer modifier using a photoinduced living radical polymerization technique. A poly(ethylene oxide) with a carboxyl group (PEO-COOH) was used as the control. The PMPC-COOHs were reacted with the amino groups of the enzyme, papain, via amide bonds. With an increase in the molecular weight in the range between 5 and 20K of the PMPC-COOH, the modification degree and alpha-helix content of the conjugated papain slightly decreased, but the remaining enzymatic activity did not depend on the molecular weight of the PMPC-COOH. However, when a much higher molecular weight PMPC-COOH (40K) was conjugated with a reduction in the modification degree, alpha-helix content was higher compared with the other PMPC-conjugated papain. Modification with PEO-COOH showed little reduction of the alpha-helix content of papain. The time dependence of the remaining enzymatic activity of the polymer-conjugated papains was evaluated during storage at 40 degrees C. The native papain diminished activity within one week. PEO-conjugated papain had decreased activity with time, but after one week it had half its initial level. The same tendency was observed when papain was modified with PMPC-COOHs 5 and 40K, that is, the enzymatic activity did not decrease even when they were stored for 4 weeks. We concluded that the PMPC chain could stabilize the enzyme by control of the molecular weight of the PMPC and modification degree to the enzyme.
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Affiliation(s)
- Daisuke Miyamoto
- Department of Materials Engineering, School of Engineering, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, 113-8656, Tokyo, Japan
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Miyamoto D, Watanabe J, Ishihara K. Highly stabilized papain conjugated with water-soluble phospholipid polymer chain having a reacting terminal group. J Appl Polym Sci 2003. [DOI: 10.1002/app.13226] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Affiliation(s)
- Frank Bordusa
- Max-Planck Society, Research Unit Enzymology of Protein Folding, Weinbergweg 22, D-06120 Halle/Saale, Germany.
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Ito Y. Solubility control of enzymes by conjugation with stimulus-responsive polymers. JOURNAL OF BIOMATERIALS SCIENCE. POLYMER EDITION 2000; 10:1237-49. [PMID: 10673019 DOI: 10.1163/156856299x00045] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
For development of bio-reactor enzymes stimuli-responsive polymers have been employed as immobilizing matrices. The stimuli-responsive polymers have been used for solubility control in water. Recently we first succeeded in the solubility control in organic media by conjugation with photo-responsive polymer. The polymer-conjugated enzymes can efficiently catalyze various chemical reactions in the soluble state and can be recovered by precipitation in response to the stimulation. In this review, the conjugation method and recent progress is described.
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Affiliation(s)
- Y Ito
- Department of Biological Science and Technology, Faculty of Engineering, The University of Tokushima, Japan.
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Kim HK, Park TG. Synthesis and characterization of thermally reversible bioconjugates composed of α-chymotrypsin and poly(N-isopropylacrylamide-co-acrylamido-2-deoxy-D-glucose). Enzyme Microb Technol 1999. [DOI: 10.1016/s0141-0229(99)00031-9] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Ito Y, Sugimura N, Kwon OH, Imanishi Y. Enzyme modification by polymers with solubilities that change in response to photoirradiation in organic media. Nat Biotechnol 1999; 17:73-5. [PMID: 9920273 DOI: 10.1038/5250] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
We have synthesized a hybrid subtilisin the solubility of which can be regulated by photoirradiation through coupling with a photoresponsive copolymer that carries spiropyran groups in its side chains. The copolymer was synthesized by polymerization of methacrylate, methacrylic acid, and spiropyran-carrying methacrylate. It was then covalently bonded to the amino groups of subtilisin Carlsberg via its carboxyl groups using a carbodiimide coupling agent. The hybrid subtilisin was perfectly soluble in toluene and efficiently catalyzed transesterification. After ultraviolet irradiation, the hybrid subtilisin precipitated and was easily and quantitatively recovered by centrifugation. Recovered hybrid subtilisin, resolubilized by visible light irradiation, retained its original transesterification activity even after several cycles of precipitation and solubilization.
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Affiliation(s)
- Y Ito
- Graduate School of Materials Science, NAIST, Ikoma, Japan.
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Ding Z, Chen G, Hoffman AS. Unusual properties of thermally sensitive oligomer-enzyme conjugates of poly(N-isopropylacrylamide)-trypsin. JOURNAL OF BIOMEDICAL MATERIALS RESEARCH 1998; 39:498-505. [PMID: 9468062 DOI: 10.1002/(sici)1097-4636(19980305)39:3<498::aid-jbm22>3.0.co;2-5] [Citation(s) in RCA: 95] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Reversible soluble-insoluble oligomer-enzyme conjugates have been prepared by conjugating a thermally sensitive oligomer, poly(N-isopropylacrylamide) [poly(NIPAAm)] to trypsin. The conjugates can catalyze enzymatic reactions in solution and then may be separated from the solution by thermal precipitation. One special feature of the conjugates is that every poly(NIPAAm) chain has only one end attachment to the enzyme, so that the loss of enzymatic activity due to steric hindrance should be minimized. Conjugates with various numbers of oligomer chains per trypsin molecule were prepared. Surprisingly, the conjugates increased in enzymatic activity with increasing oligomer conjugation to the native trypsin. The trypsin active sites in the conjugates were accessible to large molecules, such as soybean trypsin inhibitor (MW = 21,500). The enzyme conjugates were more stable than native trypsin, both in solution and in the precipitated phase. On the other hand, the conjugates lost enzymatic activity faster than native trypsin when the temperature was repeatedly cycled through the lower critical solution temperature (LCST) of the poly(NIPAAm). The recovery of the conjugates by thermal precipitation in each cycle was over 95% even after 14 cycles through the LCST.
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Affiliation(s)
- Z Ding
- Center for Bioengineering, University of Washington, Seattle 98195, USA
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