Response of the nonbiting midge Chironomus riparius to multigeneration toxicant exposure

Whole genome sequencing and RNA-seq evaluation allowed to detect Cd adaptation footprint in Chironomus riparius

Evolutionary adaptation and phenotypic plasticity are important processes on how organisms respond to pollutant exposure. We dissected here the contribution of both processes to increased tolerance in Chironomus riparius to cadmium (Cd) exposure in a multi-generation experiment and inferred the underlying genomic basis. We simulated environmentally realistic conditions by continuously increasing contaminant concentration in six replicates initiated with 1000 larvae each, three pre-exposed to Cd and three not exposed to Cd (no-Cd) over eight generations. We measured life-cycle traits, transcriptomic responses and genome-wide allele frequency changes from this evolve and resequencing (E&R) experiment. Overall, life cycle tests revealed little phenotypic adaptation to Cd exposure, but a slightly increase in survival in the first larval stage was observed. Population genomic analyses showed a strong genome-wide selective response in all replicates, highlighting two main biological functions involved in development and growth of the chironomids. Emphasizing that laboratory conditions continually exert selective pressure. However, the integration of the transcriptomic to the genomic data allowed to distinguish pathways specifically selected by the Cd exposure related to microtubules and organelles and cellular movement. Those pathways could be functionally related to an excretion of metals. Thus, our results indicate that genetic adaptation to Cd in C. riparius can happen within few generations under an environmentally relevant exposure scenario, but substantial phenotypic tolerance might take more time to arise. With our approach, we introduce an experimental setup to fill the existing gap in evolutionary ecotoxicology to investigate these early signs of genetic adaptation.

Photoperiod is an important seasonal selection factor in Chironomus riparius (Diptera: Chironomidae)

Most organisms respond and can adapt to photoperiodic changes. This affects measurable end points like developmental time, survival and fertility. For ectotherms like Chironomus riparius, temperature is the most studied environmental cue regulating their life cycle, whereas photoperiodic influence is neglected. However, the developmental speed between summer and winter seasons of a field population could not be explained solely by temperature variations. Therefore, to have a comprehensive view on how photoperiods influence chironomid’s life cycle, we investigated if it plays a role in their development and if it acts as an important selective pressure on developmental time speed. To this end, first emerged C. riparius were artificially selected for seven generations. Pre-selected and unselected organisms could develop and breed independently under three light regimes: constant light (24:0 L:D), long days (16:8 L:D) and short days (8:16 L:D). Adult emergence, mean and median emergence time and fertility were integrated into the population growth rate to compare fitness. Our findings show that although developmental time is extended under short days, this same condition may exert a selective pressure towards a shorter development. Moreover, by also using photoperiodic clues to anticipate environmental changes, chironomids can potentially adapt to alterations in climate.

Effect of long-term exposure to copper on survival and development of two successive generations of Culex pipiens (Diptera, Culicidae)

Aquatic invertebrates can be exposed to copper from various sources, including agricultural applications. For example, concentrations up to 1000 µg L^-1 are found within rice fields, where copper-containing formulations are used as fungicides and algaecides. We conducted toxicity tests to study lethal and sublethal effects of copper sulfate pentahydrate on all immature stages across two generations of Culex pipiens mosquitoes as our model organism. Mortality was dose-dependent at concentrations of 500 µg L^-1 and above in the first generation, and 125 µg L^-1 and above in the second generation. The median lethal concentrations (LC₅₀) of copper sulfate pentahydrate for larval Cx. pipiens were 476 ± 30.60 µg L^-1 and 348.67 ± 23.20 µg L^-1 for the first and second generations, respectively. Generation one pupation decreased from 96% in controls to 48% at 500 µg L^-1, while the second-generation pupation decreased from 96% in controls to 17.5% at 500 µg L^-1. Mortality during the pupal stage varied from 2 to 10% at 500 µg L^-1 of first and second generations, respectively. Higher levels also delayed development to adulthood in both generations. The duration of the immature period was 14.8 days in controls in both generations, but when exposed at 500 µg L^-1 it increased to 18.8 days in the first generation and to 20.5 days in the second generation. The chronic, multi-generation exposures in this study showed greater toxicity than reported for shorter exposures of Cx. pipiens, and confamilial taxa like Culex hortensis and Anopheles hispaniola.

Measuring mutagenicity in ecotoxicology: A case study of Cd exposure in Chironomus riparius

Existing mutagenicity tests for metazoans lack the direct observation of enhanced germline mutation rates after exposure to anthropogenic substances, therefore being inefficient. Cadmium (Cd) is a metal described as a mutagen in mammalian cells and listed as a group 1 carcinogenic and mutagenic substance. But Cd mutagenesis mechanism is not yet clear. Therefore, in the present study, we propose a method coupling short-term mutation accumulation (MA) lines with subsequent whole genome sequencing (WGS) and a dedicated data analysis pipeline to investigate if chronic Cd exposure on Chironomus riparius can alter the rate at which de novo point mutations appear. Results show that Cd exposure did not affect the basal germline mutation rate nor the mutational spectrum in C. riparius, thereby arguing that exposed organisms might experience a range of other toxic effects before any mutagenic effect may occur. We show that it is possible to establish a practical and easily implemented pipeline to rapidly detect germ cell mutagens in a metazoan test organism. Furthermore, our data implicate that it is questionable to transfer mutagenicity assessments based on in vitro methods to complex metazoans.

A multigenerational approach can detect early Cd pollution in Chironomus riparius

Cadmium (Cd) is a non-essential highly toxic metal and its presence in the environment has been a concern over the years. On the present study we adopt the spiked water exposure scenario to study early Cd contamination across five generations of the model organism Chironomus riparius. Animals were, at the beginning of each generation, submitted to 0, 1, 3.2, 10, 32 and 100 μg/L of Cd. Classical endpoints like total emergence, EmT50, fertility and the integrative fitness measure, population growth rate (PGR), were calculated at each generation. Results could demonstrate that exposure to brief and low Cd concentrations can affect all the measured endpoints and, therefore, initial Cd pollution in previously unpolluted sites can be detected after just five consecutive generations. Importantly, at 100 μg/L of Cd fertility was greatly impaired after three generations. Also, PGR calculation is a sensitive tool for monitoring early pollution of Cd. Yet, no adaptation to Cd over five generations could be observed on the present experimental setup.

Genetic, epigenetic, and developmental toxicity of Chironomus riparius raised in metal-contaminated field sediments: A multi-generational study with arsenic as a second challenge

Ecotoxicity tests conducted under well-controlled lab conditions often do not reflect the real environmental conditions. To this end, we designed an ecotoxicity test using an aquatic midge, Chironomus riparius, raised in metal-contaminated field sediments (MCFS), which reflect the real environmental conditions, for five consecutive generations (F0-F4) followed by a toxic response to arsenic exposure (as a second challenge). The toxic responses (i.e. DNA damage, DNA methylation, stress response gene expression, and mortality) were compared to those organisms reared in lab sediments (LS). Under the MCFS condition, increased adult emergence was observed for the second and third generations (F1 and F2), while a decreased tendency was evident thereafter (F3 and F4) compared to that of F0. When comparing C. riparius raised in MCFS or LS exposed to arsenic, increased sensitivity (declined survival) was observed in the larvae from F2. However, that tendency was not present in F4 of the MCFS midges, indicating a possible physiological adaptation. Increased DNA damage was observed in the MCFS-exposed organisms (F0, F2, and F4) compared to the those exposed to LS, particularly at F0. Arsenic exposure induced hypermethylation at F0 and, in contrast, hypomethylation at the later generations (F2, F4) in the MCFS-exposed organisms. Global DNA methylation results were supported by the expression of genes involved in enzymatic methylation. Moreover, alterations in oxidative stress related to gene expression showed that significant oxidative stress and perturbation of glutathione reserves occurred under the MCFS and the subsequent arsenic exposure conditions. Overall, our results suggest that multigenerational rearing under MCFS conditions resulted in physiological adaptation of C. riparius to metal exposure, specifically at later generations, which in turn modulated its response to arsenic stress through possible genetic and epigenetic mechanisms.

Effects of Perfluoralkyl Substances on a Multigenerational Scale: A Case Study with Chironomus riparius (Diptera, Chironomidae)

A multigenerational test with Chironomus riparius was performed to assess long-term effects on life-traits of exposure to selected perfluoroalkyl compounds: perfluorooctane sulfonate (PFOS), perfluorooctanoic acid (PFOA), and perfluorobutane sulfonate (PFBS). These persistent contaminants are widespread in aquatic ecosystems at low concentrations, possibly exerting long-term toxicity. Larvae of C. riparius of a native population were exposed for 10 generations to 10 μg/L nominal concentrations of PFOS, PFOA, and PFBS, comparable with the maximum values found in European rivers. All treatments showed reduced growth at most/several generations. No effects on survival, development, and reproduction were found. A final tolerance-induction test was performed exposing the pre-exposed experimental cohorts to 100 µg/L PFOS and 150 µg/L PFOA for a whole life cycle. Factorial analysis of variance revealed no difference between treatments (i.e., PFOS vs PFOA), indicating no induced tolerance. Instead, organisms pre-exposed to PFBS were the most stressed, followed by those pre-exposed to PFOA and PFOS, with earlier emergence and reduced adult weight. The results may be related to general stress and genetic erosion induced by long-term laboratory culture, but also to long-term toxicant exposure. However, no effects at the population level (population growth rate) were proved, and thus a toxicity risk in real ecosystems at the tested concentrations seems unlikely. Environ Toxicol Chem 2019;00:1-12. © 2019 SETAC.

Is it justifiable to pool Chironomus species in trace element contamination studies?

Larvae of the insect Chironomus (Chironomidae: Diptera) have great potential for estimating the bioavailability of sedimentary trace elements because they are common in fine sediments and tolerate high concentrations of these contaminants. Their use as biomonitors is limited by the fact that they are difficult to identify as to species, and the species can differ in their trace element concentrations. To determine whether pooling species would compromise their use as trace element biomonitors, we identified species of Chironomus larvae collected from 22 lakes and measured their concentrations of 9 trace elements. We found that the concentrations of arsenic, barium, cobalt, copper, manganese, and nickel did not generally differ between sympatric Chironomus species, which indicates that they could be pooled for analyses of these trace elements. In contrast, we found that cadmium (Cd), selenium (Se), and zinc (Zn) concentrations differed between species living at the same site according to their feeding behavior, that is, Chironomus species feeding on oxic sediments tended to have higher Cd and Zn concentrations, whereas those feeding on deeper anoxic sediments had higher Se concentrations. Because Se and Zn concentrations in sympatric Chironomus species usually differed by only a factor of 2, separating species based on their feeding behavior might not be as crucial as for Cd if larval Se and Zn concentrations vary greatly from site to site. Environ Toxicol Chem 2019;38:145-159. © 2018 SETAC.

The role of genetic diversity and past-history selection pressures in the susceptibility of Chironomus riparius populations to environmental stress

Natural populations experiencing intense selection and genetic drift may exhibit limited potential to adapt to environmental change. The present study addresses the following aspects of the "genetic erosion" hypothesis in the midge Chironomus riparius: does long-term mercury (Hg) contamination affect the Hg tolerance of midge populations inhabiting such impacted areas? If so, is there any fitness cost under changing environmental conditions? And does genetic impoverishment influence the susceptibility of C. riparius to cope with environmental stressful conditions? For this end, we tested the acute and chronic tolerance to Hg and salinity in four C. riparius populations differing in their levels of genetic diversity (assessed through microsatellite markers) and past-histories of Hg exposure. Results showed that the midge population collected from a heavily Hg-contaminated site had higher Hg tolerance compared to the population collected from a closely-located reference site suggesting directional selection for Hg-tolerant traits in its native environment despite no genetic erosion in the field. No increased susceptibility under changing environmental conditions of salinity stress was observed. Moreover, results also showed that populations with higher genetic diversity performed better in the partial life-cycle assays providing evidence on the key role that genetic diversity plays as mediator of populations' susceptibility to environmental stress. Our findings are discussed in terms of the suitability of C. riparius as a model organism in evolutionary toxicology studies as well as the validity of ecotoxicological assessments using genetically eroded laboratory populations.

The ribosome biogenesis pathway as an early target of benzyl butyl phthalate (BBP) toxicity in Chironomus riparius larvae

Butyl benzyl phthalate (BBP) is a ubiquitous contaminant whose presence in the environment is expected for decades, since it has been extensively used worldwide as a plasticizer in the polyvinyl chloride (PVC) industry and the manufacturing of many other products. In the present study, the interaction of BBP with the ribosome biogenesis pathway and the general transcriptional profile of Chironomus riparius aquatic larvae were investigated by means of changes in the rDNA activity (through the study of the internal transcribed spacer 2, ITS2) and variations in the expression profile of ribosomal protein genes (rpL4, rpL11, and rpL13) after acute 24-h and 48-h exposures to a wide range of BBP doses. Furthermore, cytogenetic assays were conducted to evaluate the transcriptional activity of polytene chromosomes from salivary gland cells, with special attention to the nucleolus and the Balbiani rings (BRs) of chromosome IV. BBP caused a dose and time-dependent toxicity in most of the selected biomarkers, with a general depletion in the gene expression levels and the activity of BR2 after 48-h treatments. At the same time, decondensation and activation of some centromeres took place, while the activity of nucleolus remained unaltered. Withdrawal of the xenobiotic allowed the larvae to reach control levels in the case of rpL4 and rpL13 genes, which were previously slightly downregulated in 24-h tests. These data provide the first evidence on the interaction of BBP with the ribosome synthesis pathways, which results in a significant impairment of the functional activity of ribosomal protein genes. Thus, the depletion of ribosomes would be a long-term effect of BBP-induced cellular damage. These findings may have important implications for understanding the adverse biological effects of BBP in C. riparius, since they provide new sensitive biomarkers of BBP exposure and highlight the suitability of this organism for ecotoxicological risk assessment, especially in aquatic ecosystems.

DNA damage and transcriptional changes induced by tributyltin (TBT) after short in vivo exposures of Chironomus riparius (Diptera) larvae

Tributyltin (TBT) is a widespread environmental contaminant in aquatic systems whose adverse effects in development and reproduction are related to its well-known endocrine-disrupting activity. In this work, the early molecular effects of TBT in Chironomus riparius (Diptera) were evaluated by analyzing its DNA damaging potential and the transcriptional response of different endocrine-related genes. Twenty-four-hour in vivo exposures of the aquatic larvae, at environmentally relevant doses of TBT, revealed genotoxic activity as shown by significant increases in DNA strand breaks quantified with the comet assay. TBT was also able to induce significant increases in transcripts from the ecdysone receptor gene (EcR), the ultraspiracle gene (usp) (insect ortholog of the retinoid X receptor), the estrogen-related receptor (ERR) gene and the E74 early ecdysone-inducible gene, as measured by real-time RT-PCR. In contrast, the expression of the vitellogenin (vg) gene remained unaltered, while the hsp70 gene appeared to be down-regulated. The ability of TBT to up-regulate hormonal target genes provides the first evidence, at genomic level, of its endocrine disruptive effects and also suggests a mechanism of action that mimics ecdysteroid hormones in insects. These data reveal for the first time the early genomic effects of TBT on an insect genome.

Gene expression patterns and life cycle responses of toxicant-exposed chironomids

Cellular stress responses are frequently presumed to be more sensitive than traditional ecotoxicological life cycle end points such as survival and growth. Yet, the focus to reduce test duration and to generate more sensitive end points has caused transcriptomics studies to be performed at low doses during short exposures, separately and independently from traditional ecotoxicity tests, making comparisons with life cycle end points indirect. Therefore we aimed to directly compare the effects on growth, survival, and gene expression of the nonbiting midge Chironomus riparius. To this purpose, we simultaneously analyzed life cycle and transcriptomics responses of chironomid larvae exposed to four model toxicants. We observed that already at the lowest test concentrations many transcripts were significantly differentially expressed, while the life cycle end points of C. riparius were hardly affected. Analysis of the differentially expressed transcripts showed that at the lowest test concentrations substantial and biologically relevant cellular stress was induced and that many transcripts responded already maximally at these lowest test concentrations. The direct comparison between molecular end life cycle responses after fourteen days of exposure revealed that gene expression is more sensitive to toxicant exposure than life cycle end points, underlining the potential of transcriptomics for ecotoxicity testing and environmental risk assessment.