Molecular structure of allyl radical from electron diffraction

Dramatic Acceleration of the Hopf Cyclization on Gold(111): From Enediynes to Peri-Fused Diindenochrysene Graphene Nanoribbons

Hopf et al. reported the high-temperature 6π-electrocyclization of cis-hexa-1,3-diene-5-yne to benzene in 1969. Subsequent studies using this cyclization have been limited by its very high reaction barrier. Here, we show that the reaction barrier for two model systems, (E)-1,3,4,6-tetraphenyl-3-hexene-1,5-diyne (1a) and (E)-3,4-bis(4-iodophenyl)-1,6-diphenyl-3-hexene-1,5-diyne (1b), is decreased by nearly half on a Au(111) surface. We have used scanning tunneling microscopy (STM) and noncontact atomic force microscopy (nc-AFM) to monitor the Hopf cyclization of enediynes 1a,b on Au(111). Enediyne 1a undergoes two sequential, quantitative Hopf cyclizations, first to naphthalene derivative 2, and finally to chrysene 3. Density functional theory (DFT) calculations reveal that a gold atom from the Au(111) surface is involved in all steps of this reaction and that it is crucial to lowering the reaction barrier. Our findings have important implications for the synthesis of novel graphene nanoribbons. Ullmann-like coupling of enediyne 1b at 20 °C on Au(111), followed by a series of Hopf cyclizations and aromatization reactions at higher temperatures, produces nanoribbons 12 and 13. These results show for the first time that graphene nanoribbons can be synthesized on a Au(111) surface using the Hopf cyclization mechanism.

Observation of Discrete Valence Tautomers in Crystalline Cyclopentadienyl Radicals

Single crystal X-ray (sc XRD) analyses of three symmetrically substituted cyclopentadienyl radicals (1, 2, 5) containing sterically demanding aryl groups showed that they crystallize as discrete valence tautomers (Jahn-Teller distortion) in the solid state with the unpaired electron either located in the b₁ orbital (type I, state ²B₁), resulting in a localized radical with two adjacent double bonds, or the a₂ orbital (type II, state ²A₂), leading to an allyl-type radical. Their properties in solution were examined by EPR spectroscopy as well as cyclovoltammetry and UV/vis spectroscopy including two additional cyclopentadienyl radicals (1-5). The electronic nature of 1-5 was further investigated by quantum chemical calculations.

Calculating X-ray Absorption Spectra of Open-Shell Molecules with the Unrestricted Algebraic-Diagrammatic Construction Scheme for the Polarization Propagator

X-ray absorption spectroscopy (XAS) is a powerful tool that provides information about the electronic structure of molecules via excitation of electrons from the K-shell core region to the unoccupied molecular levels. These high-lying electronic core-excited states can be accurately calculated using the algebraic-diagrammatic construction scheme of second order ADC(2) by applying the core-valence separation (CVS) approximation to the ADC(2) working equations. For the first time, an efficient implementation of an unrestricted CVS-ADC(2) variant CVS-UADC(2) is presented for the calculation of open-shell molecules by treating α and β spins separately from each other. The potential of the CVS-UADC(2) method is demonstrated with a set of small organic radicals by comparison with standard TD-DFT/B3LYP values and experimental data. It turns out that the extended variant CVS-UADC(2)-x, in particular, provides the most accurate results with errors of only 0.1% compared to experimental values. This remarkable agreement justifies the prediction of yet nonrecorded experimental XAS spectra like the one of the anthracene cation. The cation exhibits additional peaks due to the half-filled single-occupied molecular orbital, which may help to distinguish cation from the neutral species.

The soft X-ray absorption spectrum of the allyl free radical

The first experimental study of the X-ray absorption spectrum (XAS) of the allyl free radical, CH(2)CHCH(2), is reported. A supersonic He seeded beam of hyperthermal allyl radicals was crossed by a high resolution synchrotron radiation (SR) in the focus of a 3D ion momentum imaging time-of-flight (TOF) spectrometer to investigate the soft X-ray absorption and fragmentation processes. The XAS, recorded as Total-Ion-Yield (TIY), is dominated by C1s electron excitations from either the central carbon atom, C(C), or the two terminal carbon atoms, C(T), to the frontier orbitals, the semi-occupied-molecular-orbital (SOMO) and the lowest-unoccupied-molecular-orbital (LUMO). All of the intense features in the XAS could only be assigned with the aid of ab initio spectral simulation at the Multi-Configuration Self-Consistent-Field (MCSCF) level of theory, this level being required because of the multi-reference nature of the core-excited state wavefunctions of the open shell molecule. The ionization energies (IEs) of the singlet and triplet states of the C1s ionized allyl radical (XPS) were also calculated at the MCSCF level.

Competing Rearrangements of Ammonium Ylides: A Quantum Theoretical Study

The competition between the Stevens [1,2] and Sommelet-Hauser [2,3] rearrangements for a prototype ylide, N-methyl-3-propenylammonium methylide, has been investigated using ab initio and semiempirical molecular orbital methods. The activation energies for the two processes are remarkably close, separated by only 2 kJ mol(-)(1) at ROMP/6-311+G(d,p). Increasing the size of the basis set leads to a relative stabilization of the Sommelet-Hauser transition geometry, while higher levels of electron correlation (such as CCSD(T)) favor the Stevens rearrangement. Incorporation of solvent effects via the SCRF polarizable continuum model leads to a lowering of the energy barrier of the concerted [2,3] rearrangement, but has little effect on the dissociative [1,2] pathway. The activation energies of both pathways have been calculated for ylides bearing substituents on the ammonium nitrogen and the double bond. Substituents at nitrogen lead to an ylide which is sterically unstable and hence a preference for the dissociative [1,2] rearrangement. Electron-withdrawing substituents on the double bond show a preference for the [2,3] rearrangement, while mildly electron-donating alkyl substituents have very little effect on activation energies.