1
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Chen J, Sardjan AS, de Roo CM, Di Berto Mancini M, Draksharapu A, Angelone D, Hage R, Swart M, Browne WR. Generation of [(N4Py)Fe(IV)═O] 2+ through Heterolytic O-O Bond Cleavage in [(N4Py)Fe(II)(OOH)] . Inorg Chem 2025; 64:9408-9417. [PMID: 40315350 DOI: 10.1021/acs.inorgchem.4c05172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/04/2025]
Abstract
High-valent Fe(IV) oxido species are important intermediates in the catalyzed oxidation of organic compounds by nonheme iron enzymes. These species can be generated in biomimetic model complexes directly using oxygen atom transfer oxidants, e.g., PhIO and ClO-. Their formation by heterolysis of the O-O bond of putative Fe(II)-OOH species (formed from Fe(II) precursors and H2O2) has scarcely been observed. Reaction with near-stoichiometric H2O2 typically shows initial formation of Fe(III)-OH and Fe(III)-OOH species, with homolytic O-O bond cleavage thereafter proposed to generate the Fe(IV)═O state. Here, we show that [(N4Py)Fe(IV)═O]2+ (where N4Py = 1,1-di(pyridin-2-yl)-N,N-bis(pyridin-2-ylmethyl)methanamine) is formed with substoichiometric H2O2 in methanol through heterolytic cleavage of the O-O bond of an Fe(II)-OOH intermediate. Temperature-dependent studies show that the ligand exchange reactions preceding formation of the Fe(II)-OOH species and subsequent comproportionations limit the yield of the Fe(IV)═O species. Furthermore, comproportionation proceeds through hydrogen atom transfer from [(N4Py)Fe(II)(OH2)]2+ to [(N4Py)Fe(IV)═O]2+. These data rationalize the extent of the initial conversion of [(N4Py)Fe(II)(CH3CN)]2+ to [(N4Py)Fe(IV)═O]2+ under conditions relevant to catalytic oxidations. The heterolytic pathway to formation of [(N4Py)Fe(IV)═O]2+ is a key step in the development of iron(II) oxidation catalysts that can cycle between the Fe(II) and Fe(IV)═O states, avoiding nonselective reactive oxygen species.
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Affiliation(s)
- Juan Chen
- Department of Applied Chemistry, School of Science, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
| | - Andy S Sardjan
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - C Maurits de Roo
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - Marika Di Berto Mancini
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - Apparao Draksharapu
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - Davide Angelone
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - Ronald Hage
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
| | - Marcel Swart
- ICREA, Pg. Lluis Companys 23, 08010 Barcelona, Spain
- Institut de Quimica Computacional i Catalisi (IQCC), Departament de Quimica, Universitat de Girona, Campus Montilivi, 17003 Girona, Catalonia, Spain
| | - Wesley R Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands
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2
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Wu P, Zhu W, Chen Y, Wang Z, Kumar A, Wang B, Nam W. cis-Dihydroxylation by Synthetic Iron(III)-Peroxo Intermediates and Rieske Dioxygenases: Experimental and Theoretical Approaches Reveal the Key O-O Bond Activation Step. J Am Chem Soc 2024; 146:30231-30241. [PMID: 39436369 DOI: 10.1021/jacs.4c09354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2024]
Abstract
Dioxygen (O2) activation by iron-containing enzymes and biomimetic compounds generates iron-oxygen intermediates, such as iron-superoxo, -peroxo, -hydroperoxo, and -oxo, that mediate oxidative reactions in biological and abiological systems. Among the iron-oxygen intermediates, iron(III)-peroxo species are less frequently implicated as active intermediates in oxidation reactions. In this study, we present the combined experimental and theoretical investigations on cis-dihydroxylation reactions mediated by synthetic mononuclear nonheme iron-peroxo intermediates, demonstrating the importance of supporting ligands and metal centers in activating the peroxo ligand toward the O-O bond homolysis for the cis-dihydroxylation reactions. We found a significant ring size effect of the TMC ligand in [FeIII(O2)(n-TMC)]+ (TMC = tetramethylated tetraazacycloalkane; n = 12, 13, and 14) on the cis-dihydroxylation reactivity order: [FeIII(O2)(12-TMC)]+ > [FeIII(O2)(13-TMC)]+ > [FeIII(O2)(14-TMC)]+. Additionally, we found that only [FeIII(O2)(n-TMC)]+, but not other metal-peroxo complexes such as [MIII(O2)(n-TMC)]+ (M = Mn, Co, and Ni), is reactive for the cis-dihydroxylation of olefins. Using density functional theory (DFT) calculations, we revealed that electron transfer from the Fe dxz orbital to the peroxo σ*(O-O) orbital facilitates the O-O bond homolysis, with the O-O bond cleavage barrier well correlated with the energy gap between the frontier molecular orbitals of dxz and σ*(O-O). Further computational studies showed that the reactivity of the synthetic [FeIII(O2)(12-TMC)]+ complex is comparable to that of Rieske dioxygenases in cis-dihydroxylation, providing compelling evidence of the potential involvement of Fe(III)-peroxo species in Rieske dioxygenases. Thus, the present results significantly advance our understanding of the cis-dihydroxylation mechanisms by Rieske dioxygenases and synthetic nonheme iron-peroxo models.
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Affiliation(s)
- Peng Wu
- State Key Laboratory of High-Efficiency Utilization of Coal and Green Chemical Engineering, School of Chemistry and Chemical Engineering, Ningxia University, Yinchuan 750021, P. R. China
| | - Wenjuan Zhu
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yanru Chen
- Key Laboratory of Physical Chemistry of Solid Surfaces and Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Zikuan Wang
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, Mülheim an der Ruhr D-45470, Germany
| | - Akhilesh Kumar
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Binju Wang
- Key Laboratory of Physical Chemistry of Solid Surfaces and Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- College of Chemistry and Chemical Engineering, Henan Key Laboratory of Function-Oriented Porous Materials, Luoyang Normal University, Luoyang 471934, P. R. China
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3
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Grotemeyer EN, Parham JD, Jackson TA. Reaction landscape of a mononuclear Mn III-hydroxo complex with hydrogen peroxide. Dalton Trans 2023; 52:14350-14370. [PMID: 37767937 DOI: 10.1039/d3dt02672h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
Abstract
Peroxomanganese species have been proposed as key intermediates in the catalytic cycles of both manganese enzymes and synthetic catalysts. However, many of these intermediates have yet to be observed. Here, we report the formation of a series of intermediates, each generated from the reaction of the mononuclear MnIII-hydroxo complex [MnIII(OH)(dpaq2Me)]+ with hydrogen peroxide under slightly different conditions. By changing the acidity of the reaction mixture and/or the quantity of hydrogen peroxide added, we are able to control which intermediate forms. Using a combination of electronic absorption, 1H NMR, EPR, and X-ray absorption spectroscopies, as well as density functional theory (DFT) and complete active space self-consistent field (CASSCF) calculations, we formulate these intermediates as the bis(μ-oxo)dimanganese(III,IV) complex [MnIIIMnIV(μ-O)2(dpaq2Me)2]+, the MnIII-hydroperoxo complex [MnIII(OOH)(dpaq2Me)]+, and the MnIII-peroxo complex [MnIII(O2)(dpaq2Me)]. The formation of the MnIII-hydroperoxo species from the reaction of a MnIII-hydroxo complex with hydrogen peroxide mimics an elementary reaction proposed for many synthetic manganese catalysts that activate hydrogen peroxide.
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Affiliation(s)
- Elizabeth N Grotemeyer
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Joshua D Parham
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Timothy A Jackson
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
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4
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Rebilly JN, Herrero C, Sénéchal-David K, Guillot R, Banse F. Catalytic oxidation properties of an acid-resistant cross-bridged cyclen Fe(II) complex. Influence of the rigid donor backbone and protonation on the reactivity. Dalton Trans 2023. [PMID: 37334566 DOI: 10.1039/d3dt00393k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
Abstract
The catalytic properties of an iron complex bearing a pentadentate cross-bridged ligand backbone are reported. With H2O2 as an oxidant, it displays moderate conversions in epoxidation and alkane hydroxylation and satisfactory ones in aromatic hydroxylation. Upon addition of an acid to the reaction medium, a significant enhancement in aromatic and alkene oxidation is observed. Spectroscopic analyses showed that accumulation of the expected FeIII(OOH) intermediate is limited under these conditions, unless an acid is added to the mixture. This is ascribed to the inertness induced by the cross-bridged ligand backbone, which is partly reduced under acidic conditions.
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Affiliation(s)
- Jean-Noël Rebilly
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Christian Herrero
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Katell Sénéchal-David
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
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5
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Kim K, Oh S, Jeong D, Lee Y, Moon D, Lee S, Cho J. Systematic Electronic Tuning on the Property and Reactivity of Cobalt-(Hydro)peroxo Intermediates. Inorg Chem 2023; 62:7141-7149. [PMID: 37139810 DOI: 10.1021/acs.inorgchem.3c00826] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
A series of cobalt(III)-peroxo complexes, [CoIII(R2-TBDAP)(O2)]+ (1R2; R2 = Cl, H, and OMe), and cobalt(III)-hydroperoxo complexes, [CoIII(R2-TBDAP)(O2H)(CH3CN)]2+ (2R2), bearing electronically tuned tetraazamacrocyclic ligands (R2-TBDAP = N,N'-di-tert-butyl-2,11-diaza[3.3](2,6)-p-R2-pyridinophane) were prepared from their cobalt(II) precursors and characterized by various physicochemical methods. The X-ray diffraction and spectroscopic analyses unambiguously showed that all 1R2 compounds have similar octahedral geometry with a side-on peroxocobalt(III) moiety, but the O-O bond lengths of 1Cl [1.398(3) Å] and 1OMe [1.401(4) Å] were shorter than that of 1H [1.456(3) Å] due to the different spin states. For 2R2, the O-O bond vibration energies of 2Cl and 2OMe were identical at 853 cm-1 (856 cm-1 for 2H), but their Co-O bond vibration frequencies were observed at 572 cm-1 for 2Cl and 550 cm-1 for 2OMe, respectively, by resonance Raman spectroscopy (560 cm-1 for 2H). Interestingly, the redox potentials (E1/2) of 2R2 increased in the order of 2OMe (0.19 V) < 2H (0.24 V) < 2Cl (0.34 V) according to the electron richness of the R2-TBDAP ligands, but the oxygen-atom-transfer reactivities of 2R2 showed a reverse trend (k2: 2Cl < 2H < 2OMe) with a 13-fold rate enhancement at 2OMe over 2Cl in a sulfoxidation reaction with thioanisole. Although the reactivity trend contradicts the general consideration that electron-rich metal-oxygen species with low E1/2 values have sluggish electrophilic reactivity, this could be explained by a weak Co-O bond vibration of 2OMe in the unusual reaction pathway. These results provide considerable insight into the electronic nature-reactivity relationship of metal-oxygen species.
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Affiliation(s)
- Kyungmin Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
- Department of Physics and Chemistry, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea
| | - Seongmin Oh
- Department of Physics and Chemistry, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea
| | - Donghyun Jeong
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Yuri Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Dohyun Moon
- Beamline Department, Pohang Accelerator Laboratory, Pohang 37673, Republic of Korea
| | - Sunggi Lee
- Department of Physics and Chemistry, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu 42988, Republic of Korea
| | - Jaeheung Cho
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
- Graduate School of Carbon Neutrality, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
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6
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Pati SG, Bopp CE, Kohler HPE, Hofstetter TB. Substrate-Specific Coupling of O 2 Activation to Hydroxylations of Aromatic Compounds by Rieske Non-heme Iron Dioxygenases. ACS Catal 2022; 12:6444-6456. [PMID: 35692249 PMCID: PMC9171724 DOI: 10.1021/acscatal.2c00383] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Revised: 04/09/2022] [Indexed: 02/07/2023]
Abstract
![]()
Rieske dioxygenases
catalyze the initial steps in the hydroxylation
of aromatic compounds and are critical for the metabolism of xenobiotic
substances. Because substrates do not bind to the mononuclear non-heme
FeII center, elementary steps leading to O2 activation
and substrate hydroxylation are difficult to delineate, thus making
it challenging to rationalize divergent observations on enzyme mechanisms,
reactivity, and substrate specificity. Here, we show for nitrobenzene
dioxygenase, a Rieske dioxygenase capable of transforming nitroarenes
to nitrite and substituted catechols, that unproductive O2 activation with the release of the unreacted substrate and reactive
oxygen species represents an important path in the catalytic cycle.
Through correlation of O2 uncoupling for a series of substituted
nitroaromatic compounds with 18O and 13C kinetic
isotope effects of dissolved O2 and aromatic substrates,
respectively, we show that O2 uncoupling occurs after the
rate-limiting formation of FeIII-(hydro)peroxo species
from which substrates are hydroxylated. Substituent effects on the
extent of O2 uncoupling suggest that the positioning of
the substrate in the active site rather than the susceptibility of
the substrate for attack by electrophilic oxygen species is responsible
for unproductive O2 uncoupling. The proposed catalytic
cycle provides a mechanistic basis for assessing the very different
efficiencies of substrate hydroxylation vs unproductive O2 activation and generation of reactive oxygen species in reactions
catalyzed by Rieske dioxygenases.
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Affiliation(s)
- Sarah G. Pati
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
- Institute of Biogeochemistry and Pollutant Dynamics (IBP), ETH Zürich, 8092 Zürich, Switzerland
| | - Charlotte E. Bopp
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
- Institute of Biogeochemistry and Pollutant Dynamics (IBP), ETH Zürich, 8092 Zürich, Switzerland
| | - Hans-Peter E. Kohler
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
| | - Thomas B. Hofstetter
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
- Institute of Biogeochemistry and Pollutant Dynamics (IBP), ETH Zürich, 8092 Zürich, Switzerland
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7
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Lohmiller T, Spyra CJ, Dechert S, Demeshko S, Bill E, Schnegg A, Meyer F. Antisymmetric Spin Exchange in a μ-1,2-Peroxodicopper(II) Complex with an Orthogonal Cu-O-O-Cu Arrangement and S = 1 Spin Ground State Characterized by THz-EPR. JACS AU 2022; 2:1134-1143. [PMID: 35647586 PMCID: PMC9131480 DOI: 10.1021/jacsau.2c00139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 04/08/2022] [Accepted: 04/11/2022] [Indexed: 06/15/2023]
Abstract
A unique type of Cu2/O2 adduct with orthogonal (close to 90°) Cu-O-O-Cu arrangement has been proposed for initial stages of O2 binding at biological type III dicopper sites, and targeted ligand design has now allowed us to emulate such an adduct in a pyrazolate-based μ-η1 :η1-peroxodicopper(II) complex (2) with Cu-O-O-Cu torsion φ of 87°, coined ⊥ P intermediate. Full characterization of 2, including X-ray diffraction (d O-O = 1.452 Å) and Raman spectroscopy (ν̃O-O = 807 cm-1), completes a series of closely related Cu2/O2 intermediates featuring μ-η1 :η1-peroxodicopper(II) cores with φ ranging from 55° (A, cis-peroxo C P; Brinkmeier A.et al., J. Am. Chem. Soc.2021, 143, 10361) via 87° (2, ⊥ P type) up to 104° (B, approaching trans-peroxo T P; Kindermann N.et al., Angew. Chem., Int. Ed.2015, 54, 1738). SQUID magnetometry revealed ferromagnetic interaction of the CuII ions and a triplet (S t = 1) ground state in 2. Frequency-domain THz-EPR has been employed to quantitatively investigate the spin systems of 2 and B. Magnetic transitions within the triplet ground states confirmed their substantial zero-field splittings (ZFS) suggested by magnetometry. Formally forbidden triplet-to-singlet transitions at 56 (2) and 157 cm-1 (B), which are in agreement with the exchange coupling strengths J iso inferred from SQUID data, are reported for the first time for coupled dicopper(II) complexes. Rigorous analysis by spin-Hamiltonian-based simulations attributed the corresponding nonzero transition probabilities and the ZFS to substantial antisymmetric (Dzyaloshinskii-Moriya) exchange d and provided robust values and orientations for the d , J , and g tensors. These interactions can be correlated with the Cu-O-O-Cu geometries, revealing a linear increase of J iso with the Cu-O-O-Cu torsion and a strong linear decrease with the Cu-O-O angle. Relevance of the ⊥ P intermediate for O2 activation at type III dicopper sites and a potential role of antisymmetric exchange in the concomitant intersystem crossing are proposed.
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Affiliation(s)
- Thomas Lohmiller
- EPR4Energy
Joint Lab, Department Spins in Energy Conversion and Quantum Information
Science, Helmholtz Zentrum Berlin für
Materialien und Energie GmbH, Albert-Einstein-Straße 16, 12489 Berlin, Germany
| | - Can-Jerome Spyra
- University
of Göttingen, Institute of Inorganic Chemistry, Tamannstrasse 4, D-37077 Göttingen, Germany
| | - Sebastian Dechert
- University
of Göttingen, Institute of Inorganic Chemistry, Tamannstrasse 4, D-37077 Göttingen, Germany
| | - Serhiy Demeshko
- University
of Göttingen, Institute of Inorganic Chemistry, Tamannstrasse 4, D-37077 Göttingen, Germany
| | - Eckhard Bill
- Max
Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der
Ruhr, Germany
| | - Alexander Schnegg
- Max
Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der
Ruhr, Germany
| | - Franc Meyer
- University
of Göttingen, Institute of Inorganic Chemistry, Tamannstrasse 4, D-37077 Göttingen, Germany
- University
of Göttingen, International Center for Advanced Studies of
Energy Conversion (ICASEC), D-37077 Göttingen, Germany
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8
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Csizi K, Eckert L, Brunken C, Hofstetter TB, Reiher M. The Apparently Unreactive Substrate Facilitates the Electron Transfer for Dioxygen Activation in Rieske Dioxygenases. Chemistry 2022; 28:e202103937. [PMID: 35072969 PMCID: PMC9306888 DOI: 10.1002/chem.202103937] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Indexed: 12/29/2022]
Abstract
Rieske dioxygenases belong to the non-heme iron family of oxygenases and catalyze important cis-dihydroxylation as well as O-/N-dealkylation and oxidative cyclization reactions for a wide range of substrates. The lack of substrate coordination at the non-heme ferrous iron center, however, makes it particularly challenging to delineate the role of the substrate for productive O 2 activation. Here, we studied the role of the substrate in the key elementary reaction leading to O 2 activation from a theoretical perspective by systematically considering (i) the 6-coordinate to 5-coordinate conversion of the non-heme FeII upon abstraction of a water ligand, (ii) binding of O 2 , and (iii) transfer of an electron from the Rieske cluster. We systematically evaluated the spin-state-dependent reaction energies and structural effects at the active site for all combinations of the three elementary processes in the presence and absence of substrate using naphthalene dioxygenase as a prototypical Rieske dioxygenase. We find that reaction energies for the generation of a coordination vacancy at the non-heme FeII center through thermoneutral H2 O reorientation and exothermic O 2 binding prior to Rieske cluster oxidation are largely insensitive to the presence of naphthalene and do not lead to formation of any of the known reactive Fe-oxygen species. By contrast, the role of the substrate becomes evident after Rieske cluster oxidation and exclusively for the 6-coordinate non-heme FeII sites in that the additional electron is found at the substrate instead of at the iron and oxygen atoms. Our results imply an allosteric control of the substrate on Rieske dioxygenase reactivity to happen prior to changes at the non-heme FeII in agreement with a strategy that avoids unproductive O 2 activation.
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Affiliation(s)
- Katja‐Sophia Csizi
- EawagSwiss Federal Institute of Aquatic Science and TechnologyÜberlandstrasse 1338600DübendorfSwitzerland
- ETH ZürichLaboratory for Physical ChemistryVladimir-Prelog-Weg 28093ZürichSwitzerland
| | - Lina Eckert
- ETH ZürichLaboratory for Physical ChemistryVladimir-Prelog-Weg 28093ZürichSwitzerland
| | - Christoph Brunken
- EawagSwiss Federal Institute of Aquatic Science and TechnologyÜberlandstrasse 1338600DübendorfSwitzerland
- ETH ZürichLaboratory for Physical ChemistryVladimir-Prelog-Weg 28093ZürichSwitzerland
| | - Thomas B. Hofstetter
- EawagSwiss Federal Institute of Aquatic Science and TechnologyÜberlandstrasse 1338600DübendorfSwitzerland
| | - Markus Reiher
- ETH ZürichLaboratory for Physical ChemistryVladimir-Prelog-Weg 28093ZürichSwitzerland
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9
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Zhang J, Lee YM, Seo MS, Kim Y, Lee E, Fukuzumi S, Nam W. Oxidative versus basic asynchronous hydrogen atom transfer reactions of Mn(III)-hydroxo and Mn(III)-aqua complexes. Inorg Chem Front 2022. [DOI: 10.1039/d2qi00741j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydrogen atom transfer (HAT) of metal-oxygen intermediates such as metal-oxo, -hydroxo and -superoxo species have so far been studied extensively. However, HAT reactions of metal-aqua complexes have yet to be...
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10
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Cao X, Song H, Li XX, Zhao Y, Qiao Q, Wang Y. Which is the real oxidant in the competitive ligand self-hydroxylation and substrate oxidation, a biomimetic iron(II)-hydroperoxo species or an oxo-iron(IV)-hydroxy one? Dalton Trans 2022; 51:7571-7580. [DOI: 10.1039/d2dt00797e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Nonheme iron(II)-hydroperoxo species (FeII-(η2-OOH)) 1 and the concomitant oxo-iron(IV)-hydroxyl one 2 are proposed as the key intermediates of a large class of 2-oxoglutarate dependent dioxygenases (e.g., isopenicillin N synthase). Extensive...
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11
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Monika, Aman, Ansari A. Theoretical insights for generation of terminal metal-oxo species and involvement of the “oxo wall”. NEW J CHEM 2022. [DOI: 10.1039/d2nj03098e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This work is based on a deep insight on the formation of high-valent metal-oxo by the O⋯O bond cleavage of metal hydroperoxo species and our theoretical findings also illustrate the concept “oxo wall”.
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Affiliation(s)
- Monika
- Department of Chemistry Central University of Haryana, 123031, India
| | - Aman
- Department of Chemistry Central University of Haryana, 123031, India
| | - Azaj Ansari
- Department of Chemistry Central University of Haryana, 123031, India
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12
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Rebilly JN, Herrero C, Sénéchal-David K, Guillot R, Inceoglu T, Maisonneuve H, Banse F. Second-sphere effects on H 2O 2 activation by non-heme Fe II complexes: role of a phenol group in the [H 2O 2]-dependent accumulation of Fe IVO vs. Fe IIIOOH. Chem Sci 2021; 12:15691-15699. [PMID: 35003600 PMCID: PMC8653992 DOI: 10.1039/d1sc03303d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Accepted: 11/17/2021] [Indexed: 12/03/2022] Open
Abstract
Redox metalloenzymes achieve very selective oxidation reactions under mild conditions using O2 or H2O2 as oxidants and release harmless side-products like water. Their oxidation selectivity is intrinsically linked to the control of the oxidizing species generated during the catalytic cycle. To do so, a second coordination sphere is used in order to create a pull effect during the activation of O2 or H2O2, thus ensuring a heterolytic O-O bond cleavage. Herein, we report the synthesis and study of a new non-heme FeII complex bearing a pentaazadentate first coordination sphere and a pendant phenol group. Its reaction with H2O2 generates the classical FeIIIOOH species at high H2O2 loading. But at low H2O2 concentrations, an FeIVO species is generated instead. The formation of the latter is directly related to the presence of the 2nd sphere phenol group. Kinetic, variable temperature and labelling studies support the involvement of the attached phenol as a second coordination sphere moiety (weak acid) during H2O2 activation. Our results suggest a direct FeII → FeIVO conversion directed by the 2nd sphere phenol via the protonation of the distal O atom of the FeII/H2O2 adduct leading to a heterolytic O-O bond cleavage.
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Affiliation(s)
- Jean-Noël Rebilly
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Christian Herrero
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Katell Sénéchal-David
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Régis Guillot
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Tanya Inceoglu
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Hélène Maisonneuve
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
| | - Frédéric Banse
- Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO) 91405 Orsay Cedex France
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13
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Yang Z, Shan C, Pan B, Pignatello JJ. The Fenton Reaction in Water Assisted by Picolinic Acid: Accelerated Iron Cycling and Co-generation of a Selective Fe-Based Oxidant. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:8299-8308. [PMID: 34032409 DOI: 10.1021/acs.est.1c00230] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The Fenton reaction is limited by a narrow acidic pH range, the slow reduction of Fe(III), and susceptibility of the nonselective hydroxyl radical (HO•) to scavenging by water constituents. Here, we employed the biodegradable chelating agent picolinic acid (PICA) to address these concerns. Compared to the classical Fenton reaction at pH 3.0, PICA greatly accelerated the degradation of atrazine, sulfamethazine, and various substituted phenols at pH 5.0 in a reaction with autocatalytic characteristics. Although HO• served as the principal oxidant, a high-spin, end-on hydroperoxo intermediate, tentatively identified as PICA-FeIII-OOH, also exhibited reactivity toward several test compounds. Chloride release from the oxidation of 2,4,6-trichlorophenol and the positive slope of the Hammett correlation for a series of halogenated phenols were consistent with PICA-FeIII-OOH reacting as a nucleophilic oxidant. Compared to HO•, PICA-FeIII-OOH is less sensitive to potential scavengers in environmental water samples. Kinetic analysis reveals that PICA facilitates Fe(III)/Fe(II) transformation by accelerating Fe(III) reduction by H2O2. Autocatalysis is ascribed to the buildup of Fe(II) from the reduction of Fe(III) by H2O2 as well as PICA oxidation products. PICA assistance in the Fenton reaction may be beneficial to wastewater treatment because it favors iron cycling, extends the pH range, and balances oxidation universality with selectivity.
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Affiliation(s)
- Zhichao Yang
- State Key Laboratory of Pollution Control and Resource Reuse, School of Environment, Nanjing University, Nanjing 210023, PR China
- Department of Environmental Sciences, The Connecticut Agricultural Experiment Station, New Haven, Connecticut 06511, United States
| | - Chao Shan
- State Key Laboratory of Pollution Control and Resource Reuse, School of Environment, Nanjing University, Nanjing 210023, PR China
- Research Center for Environmental Nanotechnology (ReCENT), Nanjing University, Nanjing 210023, PR China
| | - Bingcai Pan
- State Key Laboratory of Pollution Control and Resource Reuse, School of Environment, Nanjing University, Nanjing 210023, PR China
- Research Center for Environmental Nanotechnology (ReCENT), Nanjing University, Nanjing 210023, PR China
| | - Joseph J Pignatello
- Department of Environmental Sciences, The Connecticut Agricultural Experiment Station, New Haven, Connecticut 06511, United States
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14
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Guo M, Lee YM, Fukuzumi S, Nam W. Biomimetic metal-oxidant adducts as active oxidants in oxidation reactions. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.213807] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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15
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Jana RD, Das A, Paine TK. Enhancing Chemo- and Stereoselectivity in C-H Bond Oxygenation with H 2O 2 by Nonheme High-Spin Iron Catalysts: The Role of Lewis Acid and Multimetal Centers. Inorg Chem 2021; 60:5969-5979. [PMID: 33784082 DOI: 10.1021/acs.inorgchem.1c00397] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Spin states of iron often direct the selectivity in oxidation catalysis by iron complexes using hydrogen peroxide (H2O2) on an oxidant. While low-spin iron(III) hydroperoxides display stereoselective C-H bond hydroxylation, the reactions are nonstereoselective with high-spin iron(II) catalysts. The catalytic studies with a series of high-spin iron(II) complexes of N4 ligands with H2O2 and Sc3+ reported here reveal that the Lewis acid promotes catalytic C-H bond hydroxylation with high chemo- and stereoselectivity. This reactivity pattern is observed with iron(II) complexes containing two cis-labile sites. The enhanced selectivity for C-H bond hydroxylation catalyzed by the high-spin iron(II) complexes in the presence of Sc3+ parallels that of the low-spin iron catalysts. Furthermore, the introduction of multimetal centers enhances the activity and selectivity of the iron catalyst. The study provides insights into the development of peroxide-dependent bioinspired catalysts for the selective oxygenation of C-H bonds without the restriction of using iron complexes of strong-field ligands.
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Affiliation(s)
- Rahul Dev Jana
- School of Chemical Sciences, Indian Association for the Cultivation of Science (IACS), 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Abhishek Das
- School of Chemical Sciences, Indian Association for the Cultivation of Science (IACS), 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Tapan Kanti Paine
- School of Chemical Sciences, Indian Association for the Cultivation of Science (IACS), 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
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16
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Yu J, Lai W. Mechanistic insights into dioxygen activation by a manganese corrole complex: a broken-symmetry DFT study. RSC Adv 2021; 11:24852-24861. [PMID: 35481047 PMCID: PMC9036905 DOI: 10.1039/d1ra02722k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 07/08/2021] [Indexed: 12/14/2022] Open
Abstract
The Mn–oxygen species have been implicated as key intermediates in various Mn-mediated oxidation reactions. However, artificial oxidants were often used for the synthesis of the Mn–oxygen intermediates. Remarkably, the Mn(v)–oxo and Mn(iv)–peroxo species have been observed in the activation of O2 by Mn(iii) corroles in the presence of base (OH−) and hydrogen donors. In this work, density functional theory methods were used to get insight into the mechanism of dioxygen activation and formation of Mn(v)–oxo. The results demonstrated that the dioxygen cannot bind to Mn without the axial OH− ligand. Upon the addition of the axial OH− ligand, the dioxygen can bind to Mn in an end-on fashion to give the Mn(iv)–superoxo species. The hydrogen atom transfer from the hydrogen donor (substrate) to the Mn(iv)–superoxo species is the rate-limiting step, having a high reaction barrier and a large endothermicity. Subsequently, the O–C bond formation is concerted with an electron transfer from the substrate radical to the Mn and a proton transfer from the hydroperoxo moiety to the nearby N atom of the corrole ring, generating an alkylperoxo Mn(iii) complex. The alkylperoxo O–O bond cleavage affords a Mn(v)–oxo complex and a hydroxylated substrate. This novel mechanism for the Mn(v)–oxo formation via an alkylperoxo Mn(iii) intermediate gives insight into the O–O bond activation by manganese complexes. DFT calculations revealed a novel mechanism for the formation of Mn(v)–oxo in the dioxygen activation by a Mn(iii) corrole complex involving a Mn(iii)–alkylperoxo intermediate.![]()
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Affiliation(s)
- Jiangfeng Yu
- Department of Chemistry
- Renmin University of China
- Beijing
- China
| | - Wenzhen Lai
- Department of Chemistry
- Renmin University of China
- Beijing
- China
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17
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Banerjee S, Draksharapu A, Crossland PM, Fan R, Guo Y, Swart M, Que L. Sc 3+-Promoted O-O Bond Cleavage of a (μ-1,2-Peroxo)diiron(III) Species Formed from an Iron(II) Precursor and O 2 to Generate a Complex with an Fe IV2(μ-O) 2 Core. J Am Chem Soc 2020; 142:4285-4297. [PMID: 32017545 DOI: 10.1021/jacs.9b12081] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Soluble methane monooxygenase (sMMO) carries out methane oxidation at 4 °C and under ambient pressure in a catalytic cycle involving the formation of a peroxodiiron(III) intermediate (P) from the oxygenation of the diiron(II) enzyme and its subsequent conversion to Q, the diiron(IV) oxidant that hydroxylates methane. Synthetic diiron(IV) complexes that can serve as models for Q are rare and have not been generated by a reaction sequence analogous to that of sMMO. In this work, we show that [FeII(Me3NTB)(CH3CN)](CF3SO3)2 (Me3NTB = tris((1-methyl-1H-benzo[d]imidazol-2-yl)methyl)amine) (1) reacts with O2 in the presence of base, generating a (μ-1,2-peroxo)diiron(III) adduct with a low O-O stretching frequency of 825 cm-1 and a short Fe···Fe distance of 3.07 Å. Even more interesting is the observation that the peroxodiiron(III) complex undergoes O-O bond cleavage upon treatment with the Lewis acid Sc3+ and transforms into a bis(μ-oxo)diiron(IV) complex, thus providing a synthetic precedent for the analogous conversion of P to Q in the catalytic cycle of sMMO.
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Affiliation(s)
- Saikat Banerjee
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Patrick M Crossland
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Ruixi Fan
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Yisong Guo
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Marcel Swart
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain.,IQCC and Department of Chemistry, University of Girona, 17003 Girona, Spain
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
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18
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Rebilly J, Zhang W, Herrero C, Dridi H, Sénéchal‐David K, Guillot R, Banse F. Hydroxylation of Aromatics by H
2
O
2
Catalyzed by Mononuclear Non‐heme Iron Complexes: Role of Triazole Hemilability in Substrate‐Induced Bifurcation of the H
2
O
2
Activation Mechanism. Chemistry 2019; 26:659-668. [DOI: 10.1002/chem.201903239] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2019] [Indexed: 12/31/2022]
Affiliation(s)
- Jean‐Noël Rebilly
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Wenli Zhang
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Christian Herrero
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Hachem Dridi
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Katell Sénéchal‐David
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
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19
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Yan Poon PC, Dedushko MA, Sun X, Yang G, Toledo S, Hayes EC, Johansen A, Piquette MC, Rees JA, Stoll S, Rybak-Akimova E, Kovacs JA. How Metal Ion Lewis Acidity and Steric Properties Influence the Barrier to Dioxygen Binding, Peroxo O-O Bond Cleavage, and Reactivity. J Am Chem Soc 2019; 141:15046-15057. [PMID: 31480847 PMCID: PMC12024724 DOI: 10.1021/jacs.9b04729] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Herein we quantitatively investigate how metal ion Lewis acidity and steric properties influence the kinetics and thermodynamics of dioxygen binding versus release from structurally analogous Mn-O2 complexes, as well as the barrier to Mn peroxo O-O bond cleavage, and the reactivity of Mn oxo intermediates. Previously we demonstrated that the steric and electronic properties of MnIII-OOR complexes containing N-heterocyclic (NAr) ligand scaffolds can have a dramatic influence on alkylperoxo O-O bond lengths and the barrier to alkylperoxo O-O bond cleavage. Herein, we examine the dioxygen reactivity of a new MnII complex containing a more electron-rich, less sterically demanding NAr ligand scaffold, and compare it with previously reported MnII complexes. Dioxygen binding is shown to be reversible with complexes containing the more electron-rich metal ions. The kinetic barrier to O2 binding and peroxo O-O bond cleavage is shown to correlate with redox potentials, as well as the steric properties of the supporting NAr ligands. The reaction landscape for the dioxygen chemistry of the more electron-rich complexes is shown to be relatively flat. A total of four intermediates, including a superoxo and peroxo species, are observed with the most electron-rich complex. Two new intermediates are shown to form following the peroxo, which are capable of cleaving strong X-H bonds. In the absence of a sacrificial H atom donor, solvent, or ligand, serves as a source of H atoms. With TEMPOH as sacrificial H atom donor, a deuterium isotope effect is observed (kH/kD = 3.5), implicating a hydrogen atom transfer (HAT) mechanism. With 1,4-cyclohexadiene, 0.5 equiv of benzene is produced prior to the formation of an EPR detected MnIIIMnIV bimetallic species, and 0.5 equiv after its formation.
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Affiliation(s)
- Penny Chaau Yan Poon
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
| | - Maksym A. Dedushko
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
| | - Xianru Sun
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Guang Yang
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Santiago Toledo
- The Department of Chemistry, St. Edward’s University, 3001 South Congress, Austin, Texas 78704-6489, United States
| | - Ellen C. Hayes
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
| | - Audra Johansen
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
| | - Marc C. Piquette
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Julian A. Rees
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Stefan Stoll
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
| | - Elena Rybak-Akimova
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Julie A. Kovacs
- Department of Chemistry, University of Washington, Campus Box 351700, Seattle, Washington 98195-1700, United States
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20
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Xu S, Draksharapu A, Rasheed W, Que L. Acid pKa Dependence in O–O Bond Heterolysis of a Nonheme FeIII–OOH Intermediate To Form a Potent FeV═O Oxidant with Heme Compound I-Like Reactivity. J Am Chem Soc 2019; 141:16093-16107. [DOI: 10.1021/jacs.9b08442] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Shuangning Xu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Waqas Rasheed
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
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21
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Bae SH, Li XX, Seo MS, Lee YM, Fukuzumi S, Nam W. Tunneling Controls the Reaction Pathway in the Deformylation of Aldehydes by a Nonheme Iron(III)–Hydroperoxo Complex: Hydrogen Atom Abstraction versus Nucleophilic Addition. J Am Chem Soc 2019; 141:7675-7679. [DOI: 10.1021/jacs.9b02272] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Seong Hee Bae
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Xiao-Xi Li
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Mi Sook Seo
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- Faculty of Science and Engineering, Meijo University, SENTAN, Japan Science and Technology Agency (JST), Nagoya, Aichi 468-8502, Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
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22
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Gomes LMF, Mahammed A, Prosser KE, Smith JR, Silverman MA, Walsby CJ, Gross Z, Storr T. A catalytic antioxidant for limiting amyloid-beta peptide aggregation and reactive oxygen species generation. Chem Sci 2019; 10:1634-1643. [PMID: 30842826 PMCID: PMC6369440 DOI: 10.1039/c8sc04660c] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Accepted: 11/27/2018] [Indexed: 12/29/2022] Open
Abstract
Alzheimer's disease (AD) is a multifaceted disease that is characterized by increased oxidative stress, metal-ion dysregulation, and the formation of intracellular neurofibrillary tangles and extracellular amyloid-β (Aβ) aggregates. In this work we report the large affinity binding of the iron(iii) 2,17-bis-sulfonato-5,10,15-tris(pentafluorophenyl)corrole complex FeL1 to the Aβ peptide (K d ∼ 10-7) and the ability of the bound FeL1 to act as a catalytic antioxidant in both the presence and absence of Cu(ii) ions. Specific findings are that: (a) an Aβ histidine residue binds axially to FeL1; (b) that the resulting adduct is an efficient catalase; (c) this interaction restricts the formation of high molecular weight peptide aggregates. UV-Vis and electron paramagnetic resonance (EPR) studies show that although the binding of FeL1 does not influence the Aβ-Cu(ii) interaction (K d ∼ 10-10), bound FeL1 still acts as an antioxidant thereby significantly limiting reactive oxygen species (ROS) generation from Aβ-Cu. Overall, FeL1 is shown to bind to the Aβ peptide, and modulate peptide aggregation. In addition, FeL1 forms a ternary species with Aβ-Cu(ii) and impedes ROS generation, thus showing the promise of discrete metal complexes to limit the toxicity pathways of the Aβ peptide.
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Affiliation(s)
- Luiza M F Gomes
- Department of Chemistry , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada .
| | - Atif Mahammed
- Schulich Faculty of Chemistry , Technion-Israel Institute of Technology , Haifa , 32000 , Israel .
| | - Kathleen E Prosser
- Department of Chemistry , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada .
| | - Jason R Smith
- Department of Chemistry , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada .
| | - Michael A Silverman
- Department of Biological Sciences , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada
| | - Charles J Walsby
- Department of Chemistry , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada .
| | - Zeev Gross
- Schulich Faculty of Chemistry , Technion-Israel Institute of Technology , Haifa , 32000 , Israel .
| | - Tim Storr
- Department of Chemistry , Simon Fraser University , V5A-1S6 , Burnaby , BC , Canada .
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23
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Jeon H, Hong S. Peroxide Bond Cleavage of Nonheme Iron-(Hydro/Alkyl)Peroxo Complexes Induced by Endogenous and Exogenous Factors. CHEM LETT 2019. [DOI: 10.1246/cl.180831] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Hyeri Jeon
- Department of Chemistry, Sookmyung Women’s University, Seoul 04310, Korea
| | - Seungwoo Hong
- Department of Chemistry, Sookmyung Women’s University, Seoul 04310, Korea
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24
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Iron(III)–salen ion catalyzed s-oxidation of l-cysteine and s-alkyl-l-cysteines by H2O2: Spectral, kinetic and electrochemical study. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.11.019] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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25
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Chen J, Draksharapu A, Angelone D, Unjaroen D, Padamati SK, Hage R, Swart M, Duboc C, Browne WR. H 2O 2 Oxidation by Fe III-OOH Intermediates and Its Effect on Catalytic Efficiency. ACS Catal 2018; 8:9665-9674. [PMID: 30319886 PMCID: PMC6179451 DOI: 10.1021/acscatal.8b02326] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Revised: 08/30/2018] [Indexed: 11/28/2022]
Abstract
![]()
The
oxidation of the C–H and C=C bonds of hydrocarbons with
H2O2 catalyzed by non-heme iron complexes with
pentadentate ligands is widely accepted as involving a reactive FeIV=O species such as [(N4Py)FeIV=O]2+ formed by homolytic cleavage of the O–O bond of an
FeIII–OOH intermediate (where N4Py is 1,1-bis(pyridin-2-yl)-N,N-bis(pyridin-2-ylmethyl)methanamine).
We show here that at low H2O2 concentrations
the FeIV=O species formed is detectable in methanol.
Furthermore, we show that the decomposition of H2O2 to water and O2 is an important competing pathway
that limits efficiency in the terminal oxidant and indeed dominates
reactivity except where only sub-/near-stoichiometric amounts of H2O2 are present. Although independently prepared
[(N4Py)FeIV=O]2+ oxidizes stoichiometric
H2O2 rapidly, the rate of formation of FeIV=O from the FeIII–OOH intermediate
is too low to account for the rate of H2O2 decomposition
observed under catalytic conditions. Indeed, with excess H2O2, disproportionation to O2 and H2O is due to reaction with the FeIII–OOH intermediate
and thereby prevents formation of the FeIV=O species.
These data rationalize that the activity of these catalysts with respect
to hydrocarbon/alkene oxidation is maximized by maintaining sub-/near-stoichiometric
steady-state concentrations of H2O2, which ensure
that the rate of the H2O2 oxidation by the FeIII–OOH intermediate is less than the rate of the O–O
bond homolysis and the subsequent reaction of the FeIV=O
species with a substrate.
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Affiliation(s)
- Juan Chen
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Apparao Draksharapu
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Davide Angelone
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17003 Girona, Catalonia, Spain
| | - Duenpen Unjaroen
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Sandeep K. Padamati
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Ronald Hage
- Catexel BV, BioPartner Center, Galileiweg 8, 2333BD Leiden, The Netherlands
| | - Marcel Swart
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17003 Girona, Catalonia, Spain
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
| | - Carole Duboc
- Departement de Chimie Moleculaire, Univ. Grenoble Alpes/CNRS, UMR-5250, BP-53, 38041 Grenoble Cedex 9, France
| | - Wesley R. Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
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26
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A spin-crossover Co(II) complex catalyzes the activation of sp3 C–H bonds by two-electron oxidants. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.06.012] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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27
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Nam W, Lee YM, Fukuzumi S. Hydrogen Atom Transfer Reactions of Mononuclear Nonheme Metal-Oxygen Intermediates. Acc Chem Res 2018; 51:2014-2022. [PMID: 30179459 DOI: 10.1021/acs.accounts.8b00299] [Citation(s) in RCA: 94] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Molecular oxygen (O2), the greenest oxidant, is kinetically stable in the oxidation of organic substrates due to its triplet ground state. In nature, O2 is reduced by two electrons with two protons to produce hydrogen peroxide (H2O2) and by four electrons with four protons to produce water (H2O) by oxidase and oxygenase metalloenzymes. In the process of the two-electron/two-proton and four-electron/four-proton reduction of O2 by metalloenzymes and their model compounds, metal-oxygen intermediates, such as metal-superoxido, -peroxido, -hydroperoxido, and -oxido species, are generated depending on the numbers of electrons and protons involved in the O2 activation reactions. The one-electron reduction of metal-oxygen intermediates is coupled with the binding of one proton. Such a hydrogen atom transfer (HAT) is defined as proton-coupled electron transfer (PCET), and there is a mechanistic dichotomy whether HAT occurs via a concerted PCET pathway or stepwise pathways [i.e., electron transfer followed by proton transfer (ET/PT) or proton transfer followed by electron transfer (PT/ET)]. The metal-oxygen intermediates formed are oxidants that can abstract a hydrogen atom (H-atom) from substrate C-H bonds. The H-atom abstraction from substrate C-H bonds by the metal-oxygen intermediates can also occur via a concerted PCET or stepwise PCET pathways. In the PCET reactions, a proton can be provided not only by the substrate itself but also by an acid that is added to a reaction solution. This Account describes the reactivities of metal-oxygen intermediates, such as metal-superoxido, -peroxido, -hydroperoxido, and -oxido complexes, in HAT reactions, focusing on the mechanisms of PCET reactions of metal-oxygen intermediates and on the mechanistic dichotomy of concerted versus stepwise pathways. Recent developments in the reactivity studies of Cr-, Fe-, and Cu-superoxido complexes in H-atom and hydride transfer reactions are discussed. Reactivities of an iron(III)-hydroperoxido complex and an iron(III)-peroxido complex binding redox-inactive metal ions are also summarized briefly. Mononuclear nonheme iron(IV)- and manganese(IV)-oxido complexes have shown high reactivities in HAT reactions, and their chemistry in PCET reactions is discussed intensively. Acid-catalyzed HAT reactions of metal-oxygen intermediates are also discussed to demonstrate a unified driving force dependence of logarithm of the rate constants of acid-catalyzed oxidation of various substrates by an iron(IV)-oxido complex and that of PCET from one-electron donors to the iron(IV)-oxido complex. PCET reactions of metal-oxygen intermediates are shown to proceed via a concerted pathway (one-step HAT) or a stepwise ET/PT pathway depending on the ET and PCET driving forces (-Δ G). The boundary conditions between concerted versus stepwise PCET pathways are clarified to demonstrate a switchover of the mechanisms only by changing the reaction temperature in the boundary conditions. This Account summarizes recent developments in the HAT reactions by synthetic mononuclear nonheme metal-oxygen intermediates over the past 10 years.
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Affiliation(s)
- Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an 710119, P. R. China
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- Graduate School of Science and Engineering, Meijo University, Nagoya, Aichi 468-8502, Japan
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28
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Roy L. Theoretical Insights into the Nature of Oxidant and Mechanism in the Regioselective Syn
-dihydroxylation of an Alkene with a Rieske oxygenase inspired Iron Catalyst. ChemCatChem 2018. [DOI: 10.1002/cctc.201800799] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Lisa Roy
- Surface Engineering and Tribology Division; CSIR Central Mechanical Engineering Research Institute; Mahatma Gandhi Avenue Durgapur 713209 India
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29
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30
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Sutherlin KD, Rivard BS, Böttger LH, Liu LV, Rogers MS, Srnec M, Park K, Yoda Y, Kitao S, Kobayashi Y, Saito M, Seto M, Hu M, Zhao J, Lipscomb JD, Solomon EI. NRVS Studies of the Peroxide Shunt Intermediate in a Rieske Dioxygenase and Its Relation to the Native Fe II O 2 Reaction. J Am Chem Soc 2018; 140:5544-5559. [PMID: 29618204 PMCID: PMC5973823 DOI: 10.1021/jacs.8b01822] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
The Rieske dioxygenases are a major subclass of mononuclear nonheme iron enzymes that play an important role in bioremediation. Recently, a high-spin FeIII-(hydro)peroxy intermediate (BZDOp) has been trapped in the peroxide shunt reaction of benzoate 1,2-dioxygenase. Defining the structure of this intermediate is essential to understanding the reactivity of these enzymes. Nuclear resonance vibrational spectroscopy (NRVS) is a recently developed synchrotron technique that is ideal for obtaining vibrational, and thus structural, information on Fe sites, as it gives complete information on all vibrational normal modes containing Fe displacement. In this study, we present NRVS data on BZDOp and assign its structure using these data coupled to experimentally calibrated density functional theory calculations. From this NRVS structure, we define the mechanism for the peroxide shunt reaction. The relevance of the peroxide shunt to the native FeII/O2 reaction is evaluated. For the native FeII/O2 reaction, an FeIII-superoxo intermediate is found to react directly with substrate. This process, while uphill thermodynamically, is found to be driven by the highly favorable thermodynamics of proton-coupled electron transfer with an electron provided by the Rieske [2Fe-2S] center at a later step in the reaction. These results offer important insight into the relative reactivities of FeIII-superoxo and FeIII-hydroperoxo species in nonheme Fe biochemistry.
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Affiliation(s)
- Kyle D. Sutherlin
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Brent S. Rivard
- Department of Biochemistry, Molecular Biology, & Biophysics, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Lars H. Böttger
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Lei V. Liu
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Melanie S. Rogers
- Department of Biochemistry, Molecular Biology, & Biophysics, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Martin Srnec
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
- J. HeyrovskýInstitute of Physical Chemistry, The Czech Academy of Sciences, Dolejškova 2155/3, 182 23 Prague 8, Czech Republic
| | - Kiyoung Park
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| | - Yoshitaka Yoda
- Japan Synchrotron Radiation Research Institute, Hyogo 679-5198, Japan
| | - Shinji Kitao
- Research Reactor Institute, Kyoto University, Osaka 590-0494, Japan
| | | | - Makina Saito
- Research Reactor Institute, Kyoto University, Osaka 590-0494, Japan
| | - Makoto Seto
- Research Reactor Institute, Kyoto University, Osaka 590-0494, Japan
| | - Michael Hu
- Advanced Photon Source, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Jiyong Zhao
- Advanced Photon Source, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - John D. Lipscomb
- Department of Biochemistry, Molecular Biology, & Biophysics, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Edward I. Solomon
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
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31
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Serrano-Plana J, Acuña-Parés F, Dantignana V, Oloo WN, Castillo E, Draksharapu A, Whiteoak CJ, Martin-Diaconescu V, Basallote MG, Luis JM, Que L, Costas M, Company A. Acid-Triggered O-O Bond Heterolysis of a Nonheme Fe III (OOH) Species for the Stereospecific Hydroxylation of Strong C-H Bonds. Chemistry 2018; 24:5331-5340. [PMID: 29193378 DOI: 10.1002/chem.201704851] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Indexed: 12/11/2022]
Abstract
A novel hydroperoxoiron(III) species [FeIII (OOH)(MeCN)(PyNMe3 )]2+ (3) has been generated by reaction of its ferrous precursor [FeII (CF3 SO3 )2 (PyNMe3 )] (1) with hydrogen peroxide at low temperatures. This species has been characterized by several spectroscopic techniques and cryospray mass spectrometry. Similar to most of the previously described low-spin hydroperoxoiron(III) compounds, 3 behaves as a sluggish oxidant and it is not kinetically competent for breaking weak C-H bonds. However, triflic acid addition to 3 causes its transformation into a much more reactive compound towards organic substrates that is capable of oxidizing unactivated C-H bonds with high stereospecificity. Stopped-flow kinetic analyses and theoretical studies provide a rationale for the observed chemistry, a triflic-acid-assisted heterolytic cleavage of the O-O bond to form a putative strongly oxidizing oxoiron(V) species. This mechanism is reminiscent to that observed in heme systems, where protonation of the hydroperoxo intermediate leads to the formation of the high-valent [(Porph. )FeIV (O)] (Compound I).
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Affiliation(s)
- Joan Serrano-Plana
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Ferran Acuña-Parés
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain.,Institute of Chemical Research of Catalonia (ICIQ), Avinguda Països Catalans 16, 43007, Tarragona, Spain
| | - Valeria Dantignana
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Williamson N Oloo
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Esther Castillo
- Departamento de Ciencia de los Materiales e Ingeniería MetalúrgicayQuímica Inorgánica, Universidad de Cádiz, Facultad de Ciencias, Apdo. 40, 11510, Puerto Real, Cádiz, Spain
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Christopher J Whiteoak
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Vlad Martin-Diaconescu
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Manuel G Basallote
- Departamento de Ciencia de los Materiales e Ingeniería MetalúrgicayQuímica Inorgánica, Universidad de Cádiz, Facultad de Ciencias, Apdo. 40, 11510, Puerto Real, Cádiz, Spain
| | - Josep M Luis
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Anna Company
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
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32
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Sankaralingam M, Lee YM, Jeon SH, Seo MS, Cho KB, Nam W. A mononuclear manganese(iii)–hydroperoxo complex: synthesis by activating dioxygen and reactivity in electrophilic and nucleophilic reactions. Chem Commun (Camb) 2018; 54:1209-1212. [DOI: 10.1039/c7cc09492b] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
A manganese(iii)–peroxo complex was synthesized by activating dioxygen (O2) and the amphoteric reactivity of a manganese(iii)–hydroperoxo complex was demonstrated in electrophilic and nucleophilic reactions.
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Affiliation(s)
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University
- Seoul 03760
- Korea
| | - So Hyun Jeon
- Department of Chemistry and Nano Science, Ewha Womans University
- Seoul 03760
- Korea
| | - Mi Sook Seo
- Department of Chemistry and Nano Science, Ewha Womans University
- Seoul 03760
- Korea
| | - Kyung-Bin Cho
- Department of Chemistry and Nano Science, Ewha Womans University
- Seoul 03760
- Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University
- Seoul 03760
- Korea
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33
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Gallagher AT, Lee JY, Kathiresan V, Anderson JS, Hoffman BM, Harris TD. A structurally-characterized peroxomanganese(iv) porphyrin from reversible O 2 binding within a metal-organic framework. Chem Sci 2017; 9:1596-1603. [PMID: 29675204 PMCID: PMC5890324 DOI: 10.1039/c7sc03739b] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Accepted: 12/13/2017] [Indexed: 11/22/2022] Open
Abstract
Within a MOF, a side-on peroxomanganese(iv) porphyrin has been isolated and comprehensively examined.
The role of peroxometal species as reactive intermediates in myriad biological processes has motivated the synthesis and study of analogous molecular model complexes. Peroxomanganese(iv) porphyrin complexes are of particular interest, owing to their potential ability to form from reversible O2 binding, yet have been exceedingly difficult to isolate and characterize in molecular form. Alternatively, immobilization of metalloporphyrin sites within a metal–organic framework (MOF) can enable the study of interactions between low-coordinate metal centers and gaseous substrates, without interference from bimolecular reactions and axial ligation by solvent molecules. Here, we employ this approach to isolate the first rigorously four-coordinate manganese(ii) porphyrin complex and examine its reactivity with O2 using infrared spectroscopy, single-crystal X-ray diffraction, EPR spectroscopy, and O2 adsorption analysis. X-ray diffraction experiments reveal for the first time a peroxomanganese(iv) porphyrin species, which exhibits a side-on, η2 binding mode. Infrared and EPR spectroscopic data confirm the formulation of a peroxomanganese(iv) electronic structure, and show that O2 binding is reversible at ambient temperature, in contrast to what has been observed in molecular form. Finally, O2 gas adsorption measurements are employed to quantify the enthalpy of O2 binding as hads = –49.6(8) kJ mol–1. This enthalpy is considerably higher than in the corresponding Fe- and Co-based MOFs, and is found to increase with increasing reductive capacity of the MII/III redox couple.
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Affiliation(s)
- Audrey T Gallagher
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
| | - Jung Yoon Lee
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
| | - Venkatesan Kathiresan
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
| | - John S Anderson
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
| | - Brian M Hoffman
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
| | - T David Harris
- Department of Chemistry , Northwestern University , 2145 Sheridan Road , Evanston , IL 60208-3113 , USA .
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34
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Speciation in iron epoxidation catalysis: A perspective on the discovery and role of non-heme iron(III)-hydroperoxo species in iron-catalyzed oxidation reactions. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.09.015] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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35
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Guo M, Lee YM, Gupta R, Seo MS, Ohta T, Wang HH, Liu HY, Dhuri SN, Sarangi R, Fukuzumi S, Nam W. Dioxygen Activation and O-O Bond Formation Reactions by Manganese Corroles. J Am Chem Soc 2017; 139:15858-15867. [PMID: 29056043 PMCID: PMC5711437 DOI: 10.1021/jacs.7b08678] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Activation of dioxygen (O2) in enzymatic and biomimetic reactions has been intensively investigated over the past several decades. More recently, O-O bond formation, which is the reverse of the O2-activation reaction, has been the focus of current research. Herein, we report the O2-activation and O-O bond formation reactions by manganese corrole complexes. In the O2-activation reaction, Mn(V)-oxo and Mn(IV)-peroxo intermediates were formed when Mn(III) corroles were exposed to O2 in the presence of base (e.g., OH-) and hydrogen atom (H atom) donor (e.g., THF or cyclic olefins); the O2-activation reaction did not occur in the absence of base and H atom donor. Moreover, formation of the Mn(V)-oxo and Mn(IV)-peroxo species was dependent on the amounts of base present in the reaction solution. The role of the base was proposed to lower the oxidation potential of the Mn(III) corroles, thereby facilitating the binding of O2 and forming a Mn(IV)-superoxo species. The putative Mn(IV)-superoxo species was then converted to the corresponding Mn(IV)-hydroperoxo species by abstracting a H atom from H atom donor, followed by the O-O bond cleavage of the putative Mn(IV)-hydroperoxo species to form a Mn(V)-oxo species. We have also shown that addition of hydroxide ion to the Mn(V)-oxo species afforded the Mn(IV)-peroxo species via O-O bond formation and the resulting Mn(IV)-peroxo species reverted to the Mn(V)-oxo species upon addition of proton, indicating that the O-O bond formation and cleavage reactions between the Mn(V)-oxo and Mn(IV)-peroxo complexes are reversible. The present study reports the first example of using the same manganese complex in both O2-activation and O-O bond formation reactions.
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Affiliation(s)
- Mian Guo
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Ranjana Gupta
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Mi Sook Seo
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Takehiro Ohta
- Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH LP Center, Hyogo 679-5148, Japan
| | - Hua-Hua Wang
- Department of Chemistry, South China University of Technology, Guangzhou 510641, China
| | - Hai-Yang Liu
- Department of Chemistry, South China University of Technology, Guangzhou 510641, China
| | - Sunder N. Dhuri
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- Department of Chemistry, Goa University, Goa 403 206, India
| | - Ritimukta Sarangi
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou 730000, China
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36
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Spin-State-Controlled Photodissociation of Iron(III) Azide to an Iron(V) Nitride Complex. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201707420] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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37
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Andris E, Navrátil R, Jašík J, Sabenya G, Costas M, Srnec M, Roithová J. Spin-State-Controlled Photodissociation of Iron(III) Azide to an Iron(V) Nitride Complex. Angew Chem Int Ed Engl 2017; 56:14057-14060. [DOI: 10.1002/anie.201707420] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2017] [Indexed: 12/28/2022]
Affiliation(s)
- Erik Andris
- Department of Organic Chemistry; Faculty of Science; Charles University; Hlavova 2030/8 128 43 Prague 2 Czech Republic
| | - Rafael Navrátil
- Department of Organic Chemistry; Faculty of Science; Charles University; Hlavova 2030/8 128 43 Prague 2 Czech Republic
| | - Juraj Jašík
- Department of Organic Chemistry; Faculty of Science; Charles University; Hlavova 2030/8 128 43 Prague 2 Czech Republic
| | - Gerard Sabenya
- Departament de Quimica and Institute of Computational Chemistry and Catalysis (IQCC); University of Girona; Campus Montilivi Girona 17071 Spain
| | - Miquel Costas
- Departament de Quimica and Institute of Computational Chemistry and Catalysis (IQCC); University of Girona; Campus Montilivi Girona 17071 Spain
| | - Martin Srnec
- J. Heyrovsky Institute of Physical Chemistry of the CAS, v. v. i.; Dolejškova 2155/3 18223 Prague 8 Czech Republic
| | - Jana Roithová
- Department of Organic Chemistry; Faculty of Science; Charles University; Hlavova 2030/8 128 43 Prague 2 Czech Republic
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38
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Wang C, Chen H. Convergent Theoretical Prediction of Reactive Oxidant Structures in Diiron Arylamine Oxygenases AurF and CmlI: Peroxo or Hydroperoxo? J Am Chem Soc 2017; 139:13038-13046. [DOI: 10.1021/jacs.7b06343] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Chao Wang
- Beijing
National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory
of Photochemistry, CAS Research/Education Center for Excellence in
Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Hui Chen
- Beijing
National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory
of Photochemistry, CAS Research/Education Center for Excellence in
Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
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39
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Park K, Li N, Kwak Y, Srnec M, Bell CB, Liu LV, Wong SD, Yoda Y, Kitao S, Seto M, Hu M, Zhao J, Krebs C, Bollinger JM, Solomon EI. Peroxide Activation for Electrophilic Reactivity by the Binuclear Non-heme Iron Enzyme AurF. J Am Chem Soc 2017; 139:7062-7070. [PMID: 28457126 DOI: 10.1021/jacs.7b02997] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Binuclear non-heme iron enzymes activate O2 for diverse chemistries that include oxygenation of organic substrates and hydrogen atom abstraction. This process often involves the formation of peroxo-bridged biferric intermediates, only some of which can perform electrophilic reactions. To elucidate the geometric and electronic structural requirements to activate peroxo reactivity, the active peroxo intermediate in 4-aminobenzoate N-oxygenase (AurF) has been characterized spectroscopically and computationally. A magnetic circular dichroism study of reduced AurF shows that its electronic and geometric structures are poised to react rapidly with O2. Nuclear resonance vibrational spectroscopic definition of the peroxo intermediate formed in this reaction shows that the active intermediate has a protonated peroxo bridge. Density functional theory computations on the structure established here show that the protonation activates peroxide for electrophilic/single-electron-transfer reactivity. This activation of peroxide by protonation is likely also relevant to the reactive peroxo intermediates in other binuclear non-heme iron enzymes.
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Affiliation(s)
- Kiyoung Park
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States.,Department of Chemistry, KAIST , Daejeon 34141, Republic of Korea
| | - Ning Li
- Department of Biochemistry and Molecular Biology, Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Yeonju Kwak
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States
| | - Martin Srnec
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States
| | - Caleb B Bell
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States
| | - Lei V Liu
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States
| | - Shaun D Wong
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States
| | | | - Shinji Kitao
- Research Reactor Institute, Kyoto University , Kumatori-cho, Osaka 590-0494, Japan
| | - Makoto Seto
- Research Reactor Institute, Kyoto University , Kumatori-cho, Osaka 590-0494, Japan
| | - Michael Hu
- Advanced Photon Source, Argonne National Laboratory , Lemont, Illinois 60439, United States
| | - Jiyong Zhao
- Advanced Photon Source, Argonne National Laboratory , Lemont, Illinois 60439, United States
| | - Carsten Krebs
- Department of Biochemistry and Molecular Biology, Pennsylvania State University , University Park, Pennsylvania 16802, United States.,Department of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - J Martin Bollinger
- Department of Biochemistry and Molecular Biology, Pennsylvania State University , University Park, Pennsylvania 16802, United States.,Department of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Edward I Solomon
- Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States.,Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford, California 94309, United States
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40
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41
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Li P, Guo C, Feng W, Sun Q, Wang W. A DFT study on the reaction mechanism between tetrachloro-o-benzoquinone and H2O2 and an alternative reaction approach to produce the hydroxyl radical. RSC Adv 2017. [DOI: 10.1039/c7ra01878a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The reaction mechanism between tetrachloro-o-benzoquinone and H2O2 was studied theoretically and an alternative approach to produce the hydroxyl radical was proposed.
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Affiliation(s)
- Ping Li
- Key Laboratory of Life-Organic Analysis
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu
- P. R. China
| | - Chao Guo
- Key Laboratory of Life-Organic Analysis
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu
- P. R. China
| | - Wenling Feng
- Key Laboratory of Life-Organic Analysis
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu
- P. R. China
| | - Qiao Sun
- Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education Institutions
- School for Radiological and Interdisciplinary Sciences
- Soochow University
- Suzhou
- P. R. China
| | - Weihua Wang
- Key Laboratory of Life-Organic Analysis
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu
- P. R. China
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42
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Bae SH, Lee Y, Fukuzumi S, Nam W. Fine Control of the Redox Reactivity of a Nonheme Iron(III)–Peroxo Complex by Binding Redox‐Inactive Metal Ions. Angew Chem Int Ed Engl 2016; 56:801-805. [DOI: 10.1002/anie.201610828] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Seong Hee Bae
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- Faculty of Science and Engineering, SENTAN (Japan) Science and Technology Agency (JST) Meijo University Nagoya Aichi 468-8502 Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences Lanzhou 730000 China
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43
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Bae SH, Lee Y, Fukuzumi S, Nam W. Fine Control of the Redox Reactivity of a Nonheme Iron(III)–Peroxo Complex by Binding Redox‐Inactive Metal Ions. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201610828] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Seong Hee Bae
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- Faculty of Science and Engineering, SENTAN (Japan) Science and Technology Agency (JST) Meijo University Nagoya Aichi 468-8502 Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences Lanzhou 730000 China
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44
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Shin B, Sutherlin KD, Ohta T, Ogura T, Solomon EI, Cho J. Reactivity of a Cobalt(III)-Hydroperoxo Complex in Electrophilic Reactions. Inorg Chem 2016; 55:12391-12399. [PMID: 27934432 DOI: 10.1021/acs.inorgchem.6b02288] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The reactivity of mononuclear metal-hydroperoxo adducts has fascinated researchers in many areas due to their diverse biological and catalytic processes. In this study, a mononuclear cobalt(III)-peroxo complex bearing a tetradentate macrocyclic ligand, [CoIII(Me3-TPADP)(O2)]+ (Me3-TPADP = 3,6,9-trimethyl-3,6,9-triaza-1(2,6)-pyridinacyclodecaphane), was prepared by reacting [CoII(Me3-TPADP)(CH3CN)2]2+ with H2O2 in the presence of triethylamine. Upon protonation, the cobalt(III)-peroxo intermediate was converted into a cobalt(III)-hydroperoxo complex, [CoIII(Me3-TPADP)(O2H)(CH3CN)]2+. The mononuclear cobalt(III)-peroxo and -hydroperoxo intermediates were characterized by a variety of physicochemical methods. Results of electrospray ionization mass spectrometry clearly show the transformation of the intermediates: the peak at m/z 339.2 assignable to the cobalt(III)-peroxo species disappears with concomitant growth of the peak at m/z 190.7 corresponding to the cobalt(III)-hydroperoxo complex (with bound CH3CN). Isotope labeling experiments further support the existence of the cobalt(III)-peroxo and -hydroperoxo complexes. In particular, the O-O bond stretching frequency of the cobalt(III)-hydroperoxo complex was determined to be 851 cm-1 for 16O2H samples (803 cm-1 for 18O2H samples), and its Co-O vibrational energy was observed at 571 cm-1 for 16O2H samples (551 cm-1 for 18O2H samples; 568 cm-1 for 16O22H samples) by resonance Raman spectroscopy. Reactivity studies performed with the cobalt(III)-peroxo and -hydroperoxo complexes in organic functionalizations reveal that the latter is capable of conducting oxygen atom transfer with an electrophilic character, whereas the former exhibits no oxygen atom transfer reactivity under the same reaction conditions. Alternatively, the cobalt(III)-hydroperoxo complex does not perform hydrogen atom transfer reactions, while analogous low-spin Fe(III)-hydroperoxo complexes are capable of this reactivity. Density functional theory calculations indicate that this lack of reactivity is due to the high free energy cost of O-O bond homolysis that would be required to produce the hypothetical Co(IV)-oxo product.
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Affiliation(s)
- Bongki Shin
- Department of Emerging Materials Science, DGIST , Daegu 42988, Korea
| | - Kyle D Sutherlin
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
| | - Takehiro Ohta
- Picobiology Institute, Graduate School of Life Science, University of Hyogo , RSC-UH LP Center, Hyogo 679-5148, Japan
| | - Takashi Ogura
- Picobiology Institute, Graduate School of Life Science, University of Hyogo , RSC-UH LP Center, Hyogo 679-5148, Japan
| | - Edward I Solomon
- Department of Chemistry, Stanford University , Stanford, California 94305, United States.,Stanford Synchrotron Radiation Laboratory, Stanford Linear Accelerator Center , Menlo Park, California 94025, United States
| | - Jaeheung Cho
- Department of Emerging Materials Science, DGIST , Daegu 42988, Korea
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45
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Rokob TA. Pathways for Arene Oxidation in Non-Heme Diiron Enzymes: Lessons from Computational Studies on Benzoyl Coenzyme A Epoxidase. J Am Chem Soc 2016; 138:14623-14638. [PMID: 27682344 DOI: 10.1021/jacs.6b06987] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Oxygenation of aromatic rings using O2 is catalyzed by several non-heme carboxylate-bridged diiron enzymes. In order to provide a general mechanistic description for these reactions, computational studies were carried out at the ONIOM(B3LYP/BP86/Amber) level on the non-heme diiron enzyme benzoyl coenzyme A epoxidase, BoxB. The calculations revealed four possible pathways for attacking the aromatic ring: (a) electrophilic (2e-) attack by a bis(μ-oxo)-diiron(IV) species (Q pathway); (b) electrophilic (2e-) attack via the σ* orbital of a μ-η2:η2-peroxo-diiron(III) intermediate (Pσ* pathway); (c) radical (1e-) attack via the π*-orbital of a superoxo-diiron(II,III) species (Pπ* pathway); (d) radical (1e-) attack of a partially quenched bis(μ-oxo)-diiron(IV) intermediate (Q' pathway). The results allowed earlier work of de Visser on olefin epoxidation by diiron complexes and QM-cluster studies of Liao and Siegbahn on BoxB to be put into a broader perspective. Parallels with epoxidation using organic peracids were also examined. Specifically for the BoxB enzyme, the Q pathway was found to be the most preferred, but the corresponding bis(μ-oxo)-diiron(IV) species is significantly destabilized and not expected to be directly observable. Epoxidation via the Pσ* pathway represents an energetically somewhat higher lying alternative; possible strategies for experimental discrimination are discussed. The selectivity toward epoxidation is shown to stem from a combination of inherent electronic properties of the thioacyl substituent and enzymatic constraints. Possible implications of the results for toluene monooxygenases are considered as well.
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Affiliation(s)
- Tibor András Rokob
- Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences , Magyar Tudósok körútja 2, 1117 Budapest, Hungary
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46
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Sutherlin KD, Liu LV, Lee YM, Kwak Y, Yoda Y, Saito M, Kurokuzu M, Kobayashi Y, Seto M, Que L, Nam W, Solomon EI. Nuclear Resonance Vibrational Spectroscopic Definition of Peroxy Intermediates in Nonheme Iron Sites. J Am Chem Soc 2016; 138:14294-14302. [PMID: 27726349 DOI: 10.1021/jacs.6b07227] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
FeIII-(hydro)peroxy intermediates have been isolated in two classes of mononuclear nonheme Fe enzymes that are important in bioremediation: the Rieske dioxygenases and the extradiol dioxygenases. The binding mode and protonation state of the peroxide moieties in these intermediates are not well-defined, due to a lack of vibrational structural data. Nuclear resonance vibrational spectroscopy (NRVS) is an important technique for obtaining vibrational information on these and other intermediates, as it is sensitive to all normal modes with Fe displacement. Here, we present the NRVS spectra of side-on FeIII-peroxy and end-on FeIII-hydroperoxy model complexes and assign these spectra using calibrated DFT calculations. We then use DFT calculations to define and understand the changes in the NRVS spectra that arise from protonation and from opening the Fe-O-O angle. This study identifies four spectroscopic handles that will enable definition of the binding mode and protonation state of FeIII-peroxy intermediates in mononuclear nonheme Fe enzymes. These structural differences are important in determining the frontier molecular orbitals available for reactivity.
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Affiliation(s)
- Kyle D Sutherlin
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
| | - Lei V Liu
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
| | - Yong-Min Lee
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Center for Biomimetic Systems, Ewha Womans University , Seoul 120-750, Korea
| | - Yeonju Kwak
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
| | | | - Makina Saito
- Research Reactor Institute, Kyoto University , Osaka 590-0494, Japan
| | - Masayuki Kurokuzu
- Research Reactor Institute, Kyoto University , Osaka 590-0494, Japan
| | | | - Makoto Seto
- Research Reactor Institute, Kyoto University , Osaka 590-0494, Japan
| | - Lawrence Que
- Department of Chemistry, University of Minnesota , Minneapolis, Minnesota 55455, United States
| | - Wonwoo Nam
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Center for Biomimetic Systems, Ewha Womans University , Seoul 120-750, Korea
| | - Edward I Solomon
- Department of Chemistry, Stanford University , Stanford, California 94305, United States.,SLAC National Accelerator Laboratory , Menlo Park, California 94025, United States
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47
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Mono- and binuclear non-heme iron chemistry from a theoretical perspective. J Biol Inorg Chem 2016; 21:619-44. [DOI: 10.1007/s00775-016-1357-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 04/29/2016] [Indexed: 10/21/2022]
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48
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Wang B, Lee YM, Clémancey M, Seo MS, Sarangi R, Latour JM, Nam W. Mononuclear Nonheme High-Spin Iron(III)-Acylperoxo Complexes in Olefin Epoxidation and Alkane Hydroxylation Reactions. J Am Chem Soc 2016; 138:2426-36. [DOI: 10.1021/jacs.5b13500] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bin Wang
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Martin Clémancey
- University of Grenoble Alpes, LCBM/PMB and CEA, IRTSV/CBM/PMB and CNRS, LCBM UMR 5249, PMB, 38000 Grenoble, France
| | - Mi Sook Seo
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Ritimukta Sarangi
- Stanford
Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Stanford University, Menlo Park, California 94025-7015, United States
| | - Jean-Marc Latour
- University of Grenoble Alpes, LCBM/PMB and CEA, IRTSV/CBM/PMB and CNRS, LCBM UMR 5249, PMB, 38000 Grenoble, France
| | - Wonwoo Nam
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
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49
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Tcho WY, Wang B, Lee YM, Cho KB, Shearer J, Nam W. A mononuclear nonheme cobalt(iii)–hydroperoxide complex with an amphoteric reactivity in electrophilic and nucleophilic oxidative reactions. Dalton Trans 2016; 45:14511-5. [DOI: 10.1039/c6dt01194b] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
A mononuclear nonheme cobalt(iii)–hydroperoxide complex bearing a tetramethylated cyclam ligand, which is synthesized by the protonation of its corresponding cobalt(iii)–peroxide complex, exhibits an amphoteric reactivity in electrophilic and nucleophilic oxidative reactions.
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Affiliation(s)
- Woon-Young Tcho
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | - Bin Wang
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | - Kyung-Bin Cho
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | | | - Wonwoo Nam
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
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50
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Serrano-Plana J, Oloo WN, Acosta-Rueda L, Meier KK, Verdejo B, García-España E, Basallote MG, Münck E, Que L, Company A, Costas M. Trapping a Highly Reactive Nonheme Iron Intermediate That Oxygenates Strong C—H Bonds with Stereoretention. J Am Chem Soc 2015; 137:15833-42. [DOI: 10.1021/jacs.5b09904] [Citation(s) in RCA: 126] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Joan Serrano-Plana
- Grup
de Química Bioinspirada, Supramolecular i Catàlisi (QBIS-CAT),
Institut de Química Computacional i Catàlisi (IQCC),
Departament de Química, Universitat de Girona, Campus de
Montilivi, Girona E17071, Catalonia, Spain
| | - Williamson N. Oloo
- Department
of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Laura Acosta-Rueda
- Universidad de Cádiz, Facultad de Ciencias, Departamento
de Ciencia de los Materiales e Ingeniería Metalúrgica
y Química Inorgánica, Apdo. 40, Puerto Real, Cádiz 11510, Spain
| | - Katlyn K. Meier
- Department
of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Begoña Verdejo
- Instituto
de Ciencia Molecular (ICMol), Universidad de Valencia, C/Catedrático
José Beltrán, Paterna, Valencia 2 46980, Spain
| | - Enrique García-España
- Instituto
de Ciencia Molecular (ICMol), Universidad de Valencia, C/Catedrático
José Beltrán, Paterna, Valencia 2 46980, Spain
| | - Manuel G. Basallote
- Universidad de Cádiz, Facultad de Ciencias, Departamento
de Ciencia de los Materiales e Ingeniería Metalúrgica
y Química Inorgánica, Apdo. 40, Puerto Real, Cádiz 11510, Spain
| | - Eckard Münck
- Department
of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Lawrence Que
- Department
of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Anna Company
- Grup
de Química Bioinspirada, Supramolecular i Catàlisi (QBIS-CAT),
Institut de Química Computacional i Catàlisi (IQCC),
Departament de Química, Universitat de Girona, Campus de
Montilivi, Girona E17071, Catalonia, Spain
| | - Miquel Costas
- Grup
de Química Bioinspirada, Supramolecular i Catàlisi (QBIS-CAT),
Institut de Química Computacional i Catàlisi (IQCC),
Departament de Química, Universitat de Girona, Campus de
Montilivi, Girona E17071, Catalonia, Spain
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