1
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Fresia M, Dierks A, Jones PG, Lindel T. Synthesis of the indeno[1,2- b]indole core of janthitrem B. Org Biomol Chem 2023; 21:9065-9069. [PMID: 37937993 DOI: 10.1039/d3ob01566a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2023]
Abstract
The tetracyclic core structure of the majority of indole diterpenoids features a trans-hydrindane moiety that is fused to an indole unit. We report here a novel synthetic route that includes a photo-Nazarov cyclization of a 3-acylindole precursor initially providing the thermodynamically preferred cis-hydrindanone. After reduction and conversion to the cyclopentadiene, dihydroxylation and hydrogenation provided the indoline. The key step generated the trans-system by stereospecific hydride shift on a dioxaphospholane under Grainger's conditions, for the first time applied to an N-heterocycle. When starting from the corresponding indole, we observed the formation of hitherto unknown methanocyclohepta[b]indolones. Deoxygenation of the trans-hydrindanone was achieved after conversion to the 1,3-dithiolane, followed by RANEY® Ni reduction.
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Affiliation(s)
- Marvin Fresia
- Institute of Organic Chemistry, Technical University Braunschweig, Hagenring 30, 38106 Braunschweig, Germany.
| | - Alexandra Dierks
- Institute of Organic Chemistry, Technical University Braunschweig, Hagenring 30, 38106 Braunschweig, Germany.
| | - Peter G Jones
- Institute of Inorganic and Analytical Chemistry, Technical University Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
| | - Thomas Lindel
- Institute of Organic Chemistry, Technical University Braunschweig, Hagenring 30, 38106 Braunschweig, Germany.
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2
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Schatz DJ, Kuenstner EJ, George DT, Pronin SV. Synthesis of rearranged indole diterpenes of the paxilline type. Nat Prod Rep 2022; 39:946-968. [PMID: 34931646 PMCID: PMC10122275 DOI: 10.1039/d1np00062d] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Covering: up to 2021Rearranged indole diterpenes of the paxilline type comprise a large group of fungal metabolites that possess diverse structural features and potentially useful biological effects. The unique indoloterpenoid motif, which is common to all congeners, was first confirmed by crystallographic studies of paxilline. This family of natural products has fascinated organic chemists for the past four decades and has inspired numerous syntheses and synthetic approaches. The present review highlights efforts that have laid the foundation and introduced new directions to this field of natural product synthesis. The introduction includes a summary of biosynthetic considerations and biological activities, the main body of the manuscript provides a detailed discussion of selected syntheses, and the review concludes with a brief outlook on the future of the field.
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Affiliation(s)
- Devon J Schatz
- Department of Chemistry, University of California, Irvine, California, 92697-2025, USA.
| | - Eric J Kuenstner
- Department of Chemistry, University of California, Irvine, California, 92697-2025, USA.
| | - David T George
- Department of Chemistry, University of California, Irvine, California, 92697-2025, USA.
| | - Sergey V Pronin
- Department of Chemistry, University of California, Irvine, California, 92697-2025, USA.
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3
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Yu S, Vermeeren P, van Dommelen K, Bickelhaupt FM, Hamlin TA. Understanding the 1,3-Dipolar Cycloadditions of Allenes. Chemistry 2020; 26:11529-11539. [PMID: 32220086 PMCID: PMC7540365 DOI: 10.1002/chem.202000857] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 03/25/2020] [Indexed: 02/03/2023]
Abstract
We have quantum chemically studied the reactivity, site-, and regioselectivity of the 1,3-dipolar cycloaddition between methyl azide and various allenes, including the archetypal allene propadiene, heteroallenes, and cyclic allenes, by using density functional theory (DFT). The 1,3-dipolar cycloaddition reactivity of linear (hetero)allenes decreases as the number of heteroatoms in the allene increases, and formation of the 1,5-adduct is, in all cases, favored over the 1,4-adduct. Both effects find their origin in the strength of the primary orbital interactions. The cycloaddition reactivity of cyclic allenes was also investigated, and the increased predistortion of allenes, that results upon cyclization, leads to systematically lower activation barriers not due to the expected variations in the strain energy, but instead from the differences in the interaction energy. The geometric predistortion of cyclic allenes enhances the reactivity compared to linear allenes through a unique mechanism that involves a smaller HOMO-LUMO gap, which manifests as more stabilizing orbital interactions.
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Affiliation(s)
- Song Yu
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - Pascal Vermeeren
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - Kevin van Dommelen
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - F. Matthias Bickelhaupt
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
- Institute for Molecules and Materials (IMM)Radboud UniversityHeyendaalseweg 1356525 AJNijmegenThe Netherlands
| | - Trevor A. Hamlin
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
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4
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Abstract
The 1,3-dipolar cycloaddition reaction is a powerful and versatile strategy for
the synthesis of carbocyclic and heterocyclic five-membered rings. Herein, the most recent
developments on the [3+2] cycloaddition reactions using allenes acting either as dipolarophiles
or 1,3-dipole precursors, are highlighted. The recent contributions on the
phosphine- and transition metal-catalyzed [3+2] annulations involving allenes as substrates
are also covered, with the exception of those in which the formation of a 1,3-dipole
(or synthetic equivalent) is not invoked.
This review summarizes the most relevant research in which allenes are used as building
blocks for the construction of structurally diverse five-membered rings via [3+2] annulation
reactions.
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Affiliation(s)
- Ana L. Cardoso
- CQC and Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal
| | - Maria I.L. Soares
- CQC and Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal
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5
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Velezheva VS, Babii OL, Khodak AA, Alekseeva EA, Nelyubina YV, Godovikov IA, Peregudov AS, Majorov KB, Nikonenko BV. Novel base-initiated cascade reactions of hemiindigos to produce dipolar γ-carbolines and indole-fused pentacycles. RSC Adv 2019; 9:41402-41408. [PMID: 35541627 PMCID: PMC9076487 DOI: 10.1039/c9ra07807j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Accepted: 12/04/2019] [Indexed: 12/03/2022] Open
Abstract
Novel continuous-flow cascade reactions are developed for producing 1,4-diaryl-disubstituted dipolar γ-carbolines 2 that contain a carboxylate group and their two pentacyclic precursors 6, 7 from hemiindigos 1. The nucleophilic and pro-electrophilic chemistry described is new to the hemiindigos 1, and it led to the discovery of antimycobacterial scaffold characteristic of rimino-type pentacycles 6, 7 and potent drug clofazimine. The new scaffold like clofazimine appears to be useful in developing lead agents active against drug-resistant/dormant TB. Based on hemiindigos we developed novel reactions for producing γ-carbolines and their precursors that appeared to be active against MTB.![]()
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Affiliation(s)
- V S Velezheva
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - O L Babii
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - A A Khodak
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - E A Alekseeva
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - Yu V Nelyubina
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - I A Godovikov
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - A S Peregudov
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences Vavilova St. 28 119991 GSP-1, Moscow Russia
| | - K B Majorov
- Laboratory for Immunogenetics, Central Institute for Tuberculosis Moscow Russia
| | - B V Nikonenko
- Laboratory for Immunogenetics, Central Institute for Tuberculosis Moscow Russia
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6
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da Silva VD, de Faria BM, Colombo E, Ascari L, Freitas GPA, Flores LS, Cordeiro Y, Romão L, Buarque CD. Design, synthesis, structural characterization and in vitro evaluation of new 1,4-disubstituted-1,2,3-triazole derivatives against glioblastoma cells. Bioorg Chem 2018; 83:87-97. [PMID: 30343205 DOI: 10.1016/j.bioorg.2018.10.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Revised: 09/25/2018] [Accepted: 10/04/2018] [Indexed: 12/21/2022]
Abstract
A new series of 1,4-disubstituted-1,2,3-triazole derivatives were synthesized through the copper-catalyzed azide-alkyne 1,3-dipolar cycloaddition (Click chemistry) and their inhibitory activities were evaluated against different human glioblastoma (GBM) cell lines, including highly drug-resistant human cell lines GBM02, GBM95. The most effective compounds were 9d, containing the methylenoxy moiety linked to triazole and the tosyl-hydrazone group, and the symmetrical bis-triazole 10a, also containing methylenoxy moiety linked to triazole. Single crystal X-ray diffraction analysis was employed for structural elucidation of compound 9d. In silico analyses of physicochemical, pharmacokinetic, and toxicological properties suggest that compounds 8a, 8b, 8c, 9d, and 10a are potential candidates for central nervous system-acting drugs.
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Affiliation(s)
- Veronica D da Silva
- Laboratório de Síntese orgânica, Pontifícia Universidade Católica do Rio de Janeiro, 22451-900 Rio de Janeiro, RJ, Brazil
| | - Bruna M de Faria
- Instituto de Ciências Biomédicas, Universidade Federal do Rio de Janeiro, 21941-902 Rio de Janeiro, RJ, Brazil
| | - Eduardo Colombo
- Laboratório de Síntese orgânica, Pontifícia Universidade Católica do Rio de Janeiro, 22451-900 Rio de Janeiro, RJ, Brazil
| | - Lucas Ascari
- Faculdade de Farmácia, UFRJ, RJ 21941-902, Brazil
| | - Gabriella P A Freitas
- Instituto de Ciências Biomédicas, Universidade Federal do Rio de Janeiro, 21941-902 Rio de Janeiro, RJ, Brazil
| | - Leonã S Flores
- Laboratório de Difração de raios X, UFJF, MG 36036-900, Brazil
| | | | - Luciana Romão
- Instituto de Ciências Biomédicas, Universidade Federal do Rio de Janeiro, 21941-902 Rio de Janeiro, RJ, Brazil
| | - Camilla D Buarque
- Laboratório de Síntese orgânica, Pontifícia Universidade Católica do Rio de Janeiro, 22451-900 Rio de Janeiro, RJ, Brazil.
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7
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Li J, Ye Y, Zhang Y. Cycloaddition/annulation strategies for the construction of multisubstituted pyrrolidines and their applications in natural product synthesis. Org Chem Front 2018. [DOI: 10.1039/c7qo01077j] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Pyrrolidines are privileged substructures of numerous bioactive natural products and drugs.
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Affiliation(s)
- Jundong Li
- Department of Chemistry and Key Laboratory of Chemical Biology of Fujian Province
- iChEM
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
| | - Yilin Ye
- Department of Chemistry and Key Laboratory of Chemical Biology of Fujian Province
- iChEM
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
| | - Yandong Zhang
- Department of Chemistry and Key Laboratory of Chemical Biology of Fujian Province
- iChEM
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
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8
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Gharpure SJ, Shelke YG. Lewis Acid Mediated Cascade Friedel–Craft/Alkyne Indol-2-yl Cation Cyclization/Vinyl Cation Trapping for the Synthesis of N-Fused Indole Derivatives. Org Lett 2017; 19:5406-5409. [DOI: 10.1021/acs.orglett.7b02680] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai - 400076, India
| | - Yogesh G. Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai - 400076, India
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9
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Zhurakovskyi O, Ellis SR, Thompson AL, Robertson J. Access to a Guanacastepene and Cortistatin-Related Skeleton via Ethynyl Lactone Ireland–Claisen Rearrangement and Transannular (4 + 3)-Cycloaddition of an Azatrimethylenemethane Diyl. Org Lett 2017; 19:2174-2177. [DOI: 10.1021/acs.orglett.7b00834] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Oleksandr Zhurakovskyi
- Department of Chemistry, University of Oxford,
Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, U.K
| | - Sam R. Ellis
- Department of Chemistry, University of Oxford,
Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, U.K
| | - Amber L. Thompson
- Department of Chemistry, University of Oxford,
Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, U.K
| | - Jeremy Robertson
- Department of Chemistry, University of Oxford,
Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, U.K
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10
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Lee JH, Cho CG. Total Synthesis of (−)-Neocosmosin A via Intramolecular Diels–Alder Reaction of 2-Pyrone. Org Lett 2016; 18:5126-5129. [DOI: 10.1021/acs.orglett.6b02575] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Joon-Ho Lee
- Center
for New Directions
in Organic Synthesis, Department of Chemistry, Hanyang University, 222 Wangshimni-ro, Seongdong-gu, Seoul 04763, Korea
| | - Cheon-Gyu Cho
- Center
for New Directions
in Organic Synthesis, Department of Chemistry, Hanyang University, 222 Wangshimni-ro, Seongdong-gu, Seoul 04763, Korea
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11
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Zhang HH, Zhu ZQ, Fan T, Liang J, Shi F. Intermediate-Dependent Unusual [4+3], [3+2] and Cascade Reactions of 3-Indolylmethanols: Controllable Chemodivergent and Stereoselective Synthesis of Diverse Indole Derivatives. Adv Synth Catal 2016. [DOI: 10.1002/adsc.201501063] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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12
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Allegretti PA, Huynh K, Ozumerzifon TJ, Ferreira EM. Lewis Acid Mediated Vinylogous Additions of Enol Nucleophiles into an α,β-Unsaturated Platinum Carbene. Org Lett 2015; 18:64-7. [PMID: 26652926 DOI: 10.1021/acs.orglett.5b03246] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A variety of substituted indoles and benzofurans are accessed via a platinum catalyzed annulation and vinylogous addition of enol nucleophiles. Several β-dicarbonyl compounds participate in the reaction, as do α-nitro and α-cyano carbonyl species. Subjecting the indole products to acidic conditions results in the formation of fused heterocycles.
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Affiliation(s)
- Paul A Allegretti
- Department of Chemistry, University of Georgia , Athens, Georgia 30602, United States
| | - Khoi Huynh
- Department of Chemistry, University of Georgia , Athens, Georgia 30602, United States
| | - Tarik J Ozumerzifon
- Department of Chemistry, University of Georgia , Athens, Georgia 30602, United States
| | - Eric M Ferreira
- Department of Chemistry, University of Georgia , Athens, Georgia 30602, United States
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13
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Feldman KS, Gonzalez IY, Glinkerman CM. Indolidenes and Indolidenium Intermediates in the Synthesis of Cyclopent[b]indoles: Mechanistic Studies on Intramolecular Cyclizations. J Org Chem 2015; 80:11849-62. [DOI: 10.1021/acs.joc.5b01777] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ken S. Feldman
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Inanllely Y. Gonzalez
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Christopher M. Glinkerman
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
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14
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Feldman KS, Gonzalez IY, Brown JE. Functionalization of 2-bromo-N-benzyl indole via lithium–bromide exchange. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.01.032] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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15
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Lebée C, Kataja AO, Blanchard F, Masson G. Formal Asymmetric Organocatalytic [3+2] Cyclization between Enecarbamates and 3-Indolylmethanols: Rapid Access to 3-Aminocyclopenta[b]indoles. Chemistry 2015; 21:8399-402. [DOI: 10.1002/chem.201500749] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Indexed: 12/15/2022]
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Devari S, Kumar A, Deshidi R, Shah BA. C–H functionalization of terminal alkynes towards stereospecific synthesis of (E) or (Z) 2-methylthio-1,4-ene-diones. Chem Commun (Camb) 2015; 51:5013-6. [DOI: 10.1039/c4cc10438b] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An efficient metal free self-sorting tandem protocol for stereospecific synthesis of (E) or (Z) 2-methylthio-1,4-ene-diones has been developed.
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Affiliation(s)
- Shekaraiah Devari
- Academy of Scientific and Innovative Research (AcSIR)
- Natural Product Microbes
- CSIR-Indian Institute of Integrative Medicine
- Jammu-Tawi
- India
| | - Arvind Kumar
- Academy of Scientific and Innovative Research (AcSIR)
- Natural Product Microbes
- CSIR-Indian Institute of Integrative Medicine
- Jammu-Tawi
- India
| | - Ramesh Deshidi
- Academy of Scientific and Innovative Research (AcSIR)
- Natural Product Microbes
- CSIR-Indian Institute of Integrative Medicine
- Jammu-Tawi
- India
| | - Bhahwal Ali Shah
- Academy of Scientific and Innovative Research (AcSIR)
- Natural Product Microbes
- CSIR-Indian Institute of Integrative Medicine
- Jammu-Tawi
- India
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