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Jiang LT, Bai PK, Wang JH, Liu B, Li YX. Experimental and theoretical insight into the cooperativity effect in composite wax powder and ternary complex of coronene with CH4 and Mn+ (Mn+ = Li+, Na+, K+, Be2+, Mg2+ or Ca2+). Mol Phys 2017. [DOI: 10.1080/00268976.2017.1371345] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Le-tao Jiang
- School of Materials Science and Engineering, North University of China, Taiyuan, China
- College of Gemology and Material Technology, Hebei Geo University, Shijiazhuang, China
| | - Pei-kang Bai
- School of Materials Science and Engineering, North University of China, Taiyuan, China
| | - Jian-hong Wang
- School of Materials Science and Engineering, North University of China, Taiyuan, China
| | - Bin Liu
- School of Materials Science and Engineering, North University of China, Taiyuan, China
| | - Yu-xin Li
- School of Materials Science and Engineering, North University of China, Taiyuan, China
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Tian QP, Wang YH, Shi WJ, song SQ, Tang HF. A theoretical investigation into the cooperativity effect between the H∙∙∙O and H∙∙∙F– interactions and electrostatic potential upon 1:2 (F–:N-(Hydroxymethyl)acetamide) ternary-system formation. J Mol Model 2013; 19:5171-85. [DOI: 10.1007/s00894-013-2011-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2013] [Accepted: 09/11/2013] [Indexed: 01/16/2023]
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3
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Affiliation(s)
| | - Steven R. Kass
- Department
of Chemistry, University of Minnesota,
Minneapolis, Minnesota 55455,
United States
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Feng GR, Qi TY, Shi WJ, Yan YG, Guo YX. A B3LYP and MP2 theoretical investigation into the synergetic effect between the O/NH⋯O and O/NH⋯F− anionic hydrogen-bonding interactions in N-(Hydroxymethyl)acetamide complex with F−. COMPUT THEOR CHEM 2013. [DOI: 10.1016/j.comptc.2013.04.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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5
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Guerrero A, Herrero R, Dávalos JZ, Koppel I, Abboud JLM, Chana A, Koppel IA. Hydrogen-Bonding Interactions of (CF3)3CH and (CF3)3C− in the Gas Phase. An Experimental (FT-ICR) and Computational Study. J Phys Chem A 2009; 113:6422-9. [DOI: 10.1021/jp811057m] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Andrés Guerrero
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - Rebeca Herrero
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - Juan Z. Dávalos
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - Ivar Koppel
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - José-Luis M. Abboud
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - Antonio Chana
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
| | - Ilmar A. Koppel
- Instituto de Química Física Rocasolano, CSIC, C/Serrano 119, E-28006 Madrid, Spain, and Institute of Chemistry, Tartu University, Jakobi Street 2, 51014 Tartu, Estonia
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Mustanir, Matsuoka M, Mishima M, Koch H. Stability of Complexes of Phenylacetylides and Benzyl Alkoxides with Methanol in the Gas Phase. Acid–Base Correlation in the Ionic Hydrogen-Bond Strength. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2006. [DOI: 10.1246/bcsj.79.1118] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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7
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DeTuri VF, Koch HF, Koch JG, Lodder G, Mishima M, Zuilhof H, Abrams NM, Anders CE, Biffinger JC, Han P, Kurland AR, Nichols JM, Ruminski AM, Smith PR, Vasey KD. Comparison of gas-phase acidities of some carbon acids with their rates of hydron exchange in methanolic methoxide. J PHYS ORG CHEM 2006. [DOI: 10.1002/poc.1057] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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8
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Keeffe JR, Gronert S, Colvin ME, Tran NL. Identity proton-transfer reactions from C-H, N-H, and O-H acids. An ab initio, DFT, and CPCM-B3LYP aqueous solvent model study. J Am Chem Soc 2003; 125:11730-45. [PMID: 13129378 DOI: 10.1021/ja0356683] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Identity proton-transfer reactions between 21 acids, Y-X-H, and their conjugate bases, (-)X-Y, were studied according to the reaction scheme, Y-X-H + (-)X-Y --> (Y-X-H...(-)X-Y)(cx) --> [Y-X...H...X-Y](ts) --> (Y-X..H-X-Y)(cx) --> Y-X(-) + H-X-Y, where cx indicates an ion-molecule complex and ts indicates the proton-transfer transition state. All species were optimized at the MP2/6-311+G level, and these geometries were used for single-point calculations by other methods: coupled-cluster, DFT (gas phase), and a polarizable continuum aqueous solvent model (COSMO). All methods gave enthalpies of deprotonation which correlate well with experimental measurements of deltaH(ACID) (gas) or pK(a) (aq). Calculated gas-phase enthalpies of deprotonation (deltaH(ACID)) and enthalpies of activation (deltaH(#)) are poorly correlated except for small, carefully selected sets. This result stands in contrast to the many aqueous phase Brönsted correlations of kinetic and equilibrium acid strength. On the other hand, gas-phase enthalpies of complexation and deltaH(#) are well correlated, indicating that factors which stabilize the transition state are at work in the bimolecular ion-molecule complex although to a smaller degree. We infer that intermoiety electrostatic and other interactions, similar within the complex and the transition state, but absent in the separated reactants (products), cause the lack of correlation between deltaH(ACID) and the other two quantities. Such differences are strongly attenuated in water because reactants and products do interact with polar/polarizable matter (the solvent) if not with each other. Charge distributions (NPA) were computed, allowing calculation of Bernasconi's "transition state imbalance parameter". Such measures provide intuitively satisfactory trends, but only if the reaction termini, X, are kept the same. As X is made more electronegative, the magnitude of the apparent imbalance increases, a result of greater negative charge on X in the transition state. This result gives additional support for the importance of the ion-triplet structure, [YX(-)...H(+)...(-)XY], to the stability of the transition state. Additional qualitative support for this conclusion is provided by the inverse relationship between the activation barrier and the charge on the in-flight hydrogen in the transition state, and by the dominance of polar over resonance substituent effects on the stability of the transition state. Calculations also show that the "nitroalkane anomaly", well established in solution, does not exist in the gas phase. The COSMO model partly reproduces this anomaly and performs adequately except when strong, specific intermolecular forces such as hydrogen bonding between solvent and anions are important.
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Affiliation(s)
- James R Keeffe
- Department of Chemistry and Biochemistry, San Francisco State University, 1600 Holloway Avenue, San Francisco, California 94132, USA
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Bach RD, Thorpe C, Dmitrenko O. C−H···Carboxylate Oxygen Hydrogen Bonding in Substrate Activation by Acyl-CoA Dehydrogenases: Synergy between the H-bonds. J Phys Chem B 2002. [DOI: 10.1021/jp020029k] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Robert D. Bach
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716
| | - Colin Thorpe
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716
| | - Olga Dmitrenko
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716
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