Temperature-Dependent Reactivity of a Non-heme FeIII(OH)(SR) Complex: Relevance to Isopenicillin N Synthase

Using machine learning methods to predict the diabatic bond dissociation energy of non-heme iron complexes

Bond dissociation energy (BDE) is an important property in chemical research. In the process of non-heme iron complex catalytic reactions, diabatic BDE has a significant impact on the selectivity of halogenation and hydroxylation reactions. Measuring or calculating BDE by using traditional experimental or theoretical methods is often expensive and complex, so we propose the first application of machine learning on non-heme iron complexes to predict and rationalize the diabatic BDEs of Fe-X and Fe-OH bonds in order to assist in the study of selectivity in non-heme iron complex catalytic reactions. We built a reliable and representative dataset containing over 600 types of non-heme iron complexes and used density functional theory (DFT) to calculate nearly 900 diabatic BDE for machine learning. In terms of model training, we used 2D molecular fingerprints and 3D descriptors as inputs to train the regression model. The results indicate that the ensemble algorithm combined with Morgan fingerprints can effectively predict the diabatic BDEs of non-heme iron complexes. Using the Gradient Boosting Regressor (GBR) model and Morgan fingerprints can achieve an accurate prediction of R2 = 0.791 and the mean absolute error (MAE) = 10.23 kcal mol-1. The incorporation of 3D descriptors significantly improves the predictive performance of molecular fingerprints other than Morgan fingerprints. Notably, the SOAP descriptor effectively captures key 3D molecular information, making it particularly advantageous for predicting isomers with large ΔBDE. However, when the ΔBDE of isomers in the dataset is small, Morgan fingerprints remain the more efficient choice.

The Cooperative Effects of the Rh-M Dual-Metal Atomic Pairs in Formic Acid Oxidation

The continuously increasing mass activity of precious metal in formic acid oxidation reaction (FAOR) is the key to achieving the practical application of direct formic acid fuel cells (DFAFCs). Herein, Rh-based dual-metal atomic pairs supported on nitrogen-doped carbon catalysts [DAP-(M, Rh)/CN] with adjacent interatomic Rh-M (M = V, Cr, Mn, Fe, Co, Ni, Cu) have been synthesized by a "host-guest" strategy. It is discovered that DAP-(Cr, Rh)/CN shows the highest mass activity of 64.1 A mg-1, which is 3.8 times higher than that of the single atom Rh catalyst (17.0 A mg-1) and two orders of magnitude higher than Pd/C (0.58 A mg-1). Interestingly, the mass activity of DAP-(M, Rh)/CN first increases from 11.7 A mg-1 (Rh-V) to 64.1 A mg-1 (Rh-Cr) and then decreases to 21.8 A mg-1 (Rh-Cu), forming a volcano curve of the reaction activity. Density functional theory calculations combined with in situ Fourier transform infrared spectrometer (FTIR) spectra reveal that formic acid oxidized on a series of DAP-(M, Rh)/CN catalysts through the formate route with the subsidiary M metal atoms binding the HCOO species and the Rh atom accepting the H atoms. The most suitable adsorption strength of HCOO on the Cr sites luckily contributes to two spontaneous elementary steps and thus accelerates the FAOR rates.

Influence of the second coordination sphere on O2 activation by a nonheme iron(II) thiolate complex

The synthesis and characterization of a new ligand, 1-(bis(pyridin-2-ylmethyl) amino)-2-methylpropane-2-thiolate (BPAMe2S-) and its nonheme iron complex, FeII(BPAMe2S)Br (1), is reported. Reaction of 1 with O2 at -20 °C generates a high-spin iron(III)-hydroxide complex, [FeIII(OH)(BPAMe2S)(Br)] (2), that was characterized by UV-vis, 57Fe Mössbauer, and electron paramagnetic resonance (EPR) spectroscopies, and electrospray ionization mass spectrometry (ESI-MS). Density functional theory (DFT) calculations were employed to support the spectroscopic assignments. In a previous report (J. Am. Chem. Soc.2024, 146, 7915-7921), the related iron(II) complex, FeII(BNPAMe2S)Br (BNPAMe2S- = (bis((6-(neopentylamino)pyridinyl) methyl)amino)-2-methylpropane-2-thiolate) was reported and shown to react with O2 at low temperature to give a rare iron(III)-superoxide intermediate, which then converts to an S‑oxygenated sulfinate as seen for the nonheme iron thiol dioxygenases. This complex includes two hydrogen bonding neopentylamino groups in the second coordination sphere. Complex 1 does not include these H-bonding groups, and its reactivity with O2 does not yield a stabilized Fe/O2 intermediate or S‑oxygenated products, although the data suggest an inner-sphere mechanism and formation of an iron‑oxygen species that is capable of abstracting hydrogen atoms from solvent or weak CH bond substrates. This study indicates that the H-bond donors are critical for stabilizing the FeIII(O2-•) intermediate with the BNPAMe2S- ligand, which in turn leads to S‑oxygenation, as opposed to H-atom abstraction, following O2 activation by the nonheme iron center.

Nonheme Mononuclear and Dinuclear Iron(II) and Iron(III) Fluoride Complexes and Their Fluorine Radical Transfer Reactivity

The nonheme iron(II) complexes containing a fluoride anion, FeII(BNPAPh2O)(F) (1) and [FeII(BNPAPh2OH)(F)(THF)](BF4) (2), were synthesized and structurally characterized. Addition of dioxygen to either 1 or 2 led to the formation of a fluoride-bridged, dinuclear iron(III) complex [Fe2III(BNPAPh2O)2(F)2(μ-F)]+ (4), which was characterized by single-crystal X-ray diffraction, 1H NMR, and elemental analysis. An iron(II)(iodide) complex, FeII(BNPAPh2O)(I) (3), was prepared and reacted with O2 to give the mononuclear complex cis-FeIII(BNPAPh2O)(OH)(I) (5). Addition of excess fluoride to 5 led to the formation of the oxo-bridged, dinuclear iron(III) complex [Fe2III(BNPAPh2O)2(F)2(μ-O)] (6), while the mononuclear iron(III)(fluoride) complex cis-FeIII(BNPAPh2O)(F)(Cl) (7) was prepared from the addition of excess F- to FeIII(BNPAPh2O)Cl2. The dinuclear complexes 4 and 6 were unreactive to fluorine radical transfer, but mononuclear 7 reacts with the radical substrate (p-MeO-C6H4)3C• to give the fluorine radical transfer products FeII(BNPAPh2O)(Cl) and (p-OMe-C6H4)3CF. These results show that a mononuclear FeIII(F) complex is capable of mediating fluorine radical transfer, even in the presence of second coordination sphere hydrogen bonds to the F- ligand. These findings are placed in context with what is known about the nonheme iron halogenases and related synthetic catalysts regarding their ability, or lack thereof, to mediate fluorine radical transfer reactions.

The Emergence of a Polar Nematic Phase: A Chemist's Insight into the Ferroelectric Nematic Phase

The discovery of a new polar nematic phase; the ferroelectric nematic, has generated a great deal of excitement in the field of liquid crystals. To date there have been around 150 materials reported exhibiting the ferroelectric nematic phase, in general, following three key archetypal structures with these compounds known as RM734, DIO and UUQU-4N. In this review, the relationship between the molecular structure and the stability of the ferroelectric nematic, NF, phase will be described from a chemist's perspective. This will look to highlight the wide variety of functionalities which have been incorporated into these archetypal structures and how these changes influence the transition temperatures of the mesophases present. The NF phase appears to be stabilised particularly by reducing the length of terminal alkyl chains present and adding fluorines laterally along the length of the molecular backbone. This review will look to introduce the background of the ferroelectric nematic phase before then showing the molecular structures of a range of materials which exhibit the phase, describing their structure-property relationships and therefore giving an up-to-date account of the literature for this fascinating new mesophase.

A Nonheme Iron(III) Superoxide Complex Leads to Sulfur Oxygenation

A new alkylthiolate-ligated nonheme iron complex, FeII(BNPAMe2S)Br (1), is reported. Reaction of 1 with O2 at -40 °C, or reaction of the ferric form with O2•- at -80 °C, gives a rare iron(III)-superoxide intermediate, [FeIII(O2)(BNPAMe2S)]+ (2), characterized by UV-vis, 57Fe Mössbauer, ATR-FTIR, EPR, and CSIMS. Metastable 2 then converts to an S-oxygenated FeII(sulfinate) product via a sequential O atom transfer mechanism involving an iron-sulfenate intermediate. These results provide evidence for the feasibility of proposed intermediates in thiol dioxygenases.

Functional Model of Compound II of Cytochrome P450: Spectroscopic Characterization and Reactivity Studies of a FeIV-OH Complex

Herein, we show that the reaction of a mononuclear FeIII(OH) complex (1) with N-tosyliminobenzyliodinane (PhINTs) resulted in the formation of a FeIV(OH) species (3). The obtained complex 3 was characterized by an array of spectroscopic techniques and represented a rare example of a synthetic FeIV(OH) complex. The reaction of 1 with the one-electron oxidizing agent was reported to form a ligand-oxidized FeIII(OH) complex (2). 3 revealed a one-electron reduction potential of -0.22 V vs Fc+/Fc at -15 °C, which was 150 mV anodically shifted than 2 (Ered = -0.37 V vs Fc+/Fc at -15 °C), inferring 3 to be more oxidizing than 2. 3 reacted spontaneously with (4-OMe-C6H4)3C• to form (4-OMe-C6H4)3C(OH) through rebound of the OH group and displayed significantly faster reactivity than 2. Further, activation of the hydrocarbon C-H and the phenolic O-H bond by 2 and 3 was compared and showed that 3 is a stronger oxidant than 2. A detailed kinetic study established the occurrence of a concerted proton-electron transfer/hydrogen atom transfer reaction of 3. Studying one-electron reduction of 2 and 3 using decamethylferrocene (Fc*) revealed a higher ket of 3 than 2. The study established that the primary coordination sphere around Fe and the redox state of the metal center is very crucial in controlling the reactivity of high-valent Fe-OH complexes. Further, a FeIII(OMe) complex (4) was synthesized and thoroughly characterized, including X-ray structure determination. The reaction of 4 with PhINTs resulted in the formation of a FeIV(OMe) species (5), revealing the presence of two FeIV species with isomer shifts of -0.11 mm/s and = 0.17 mm/s in the Mössbauer spectrum and showed FeIV/FeIII potential at -0.36 V vs Fc+/Fc couple in acetonitrile at -15 °C. The reactivity studies of 5 were investigated and compared with the FeIV(OH) complex (3).

Selective Radical Transfer in a Series of Nonheme Iron(III) Complexes

A series of nonheme iron complexes, FeIII(BNPAPh2O)(Lax)(Leq) (Lax/eq = N3-, NCS-, NCO-, and Cl-) have been synthesized using the previously reported BNPAPh2O- ligand. The ferrous analogs FeII(BNPAPh2O)(Lax) (Lax = N3-, NCS-, and NCO-) were also prepared. The complexes were structurally characterized using single crystal X-ray diffraction, which shows that all the FeIII complexes are six-coordinate, with one anionic ligand (Lax) in the H-bonding axial site and the other anionic ligand (Leq) in the equatorial plane, cis to the Lax ligand. The reaction of FeIII(BNPAPh2O-)(Lax)(Leq) with Ph3C• shows that one ligand is selectively transferred in each case. A selectivity trend emerges that shows •N3 is the most favored for transfer in each case to the carbon radical, whereas Cl• is the least favored. The NCO and NCS ligands showed an intermediate propensity for radical transfer, with NCS > NCO. The overall order of selectivity is N3 > NCS > NCO > Cl. In addition, we also demonstrated that H-bonding has a small effect on governing product selectivity by using a non-H-bonded ligand (DPAPh2O-). This study demonstrates the inherent radical transfer selectivity of nonhydroxo-ligated nonheme iron(III) complexes, which could be useful for efforts in synthetic and (bio)catalytic C-H functionalization.

Molecular Shape, Electronic Factors, and the Ferroelectric Nematic Phase: Investigating the Impact of Structural Modifications

The synthesis and characterisation of two series of low molar mass mesogens, the (4-nitrophenyl) 2-alkoxy-4-(4-methoxybenzoyl)oxybenzoates (NT3.m) and the (3-fluoro-4-nitrophenyl) 2-alkoxy-4-(4-methoxybenzoyl)oxybenzoates (NT3F.m), are reported in order to investigate the effect of changing the position of a lateral alkoxy chain from the methoxy-substituted terminal ring to the central phenyl ring in these two series of materials based on RM734. All members of the NT3.m series exhibited a conventional nematic phase, N, which preceded the ferroelectric nematic phase, NF , whereas all the members of the NT3F.m series exhibited direct NF -I transitions except for NT3F.1 which also exhibited an N phase. These materials cannot be described as wedge-shaped, yet their values of the ferroelectric nematic-nematic transition temperature, TN F N ${{_{{\rm N}{_{{\rm F}}}{\rm N}}}}$ , exceed those of the corresponding materials with the lateral alkoxy chain located on the methoxy-substituted terminal ring. In part, this may be attributed to the effect that changing the position of the lateral alkoxy chain has on the electronic properties of these materials, specifically on the electron density associated with the methoxy-substituted terminal aromatic ring. The value of TNI decreased with the addition of a fluorine atom ortho to the nitro group in NT3F.1, however, the opposite behaviour was found when the transition temperatures of the NF phase were compared which are higher for the NT3F.m series. This may reflect a change in the polarity and polarizability of the NT3F.m series compared to the NT3.m series. Therefore, it is suggested that, rather than simply promoting a tapered shape, the role of the lateral chain in inhibiting anti-parallel associations and its effect on the electronic properties of the molecules are the key factors in driving the formation of the NF phase.

Crystal Engineering Enables Cobalt-Based Metal-Organic Frameworks as High-Performance Electrocatalysts for H2O2 Production

Metal-organic frameworks (MOFs) with highly adjustable structures are an emerging family of electrocatalysts in two-electron oxygen reduction reaction (2e-ORR) for H₂O₂ production. However, the development of MOF-based 2e-ORR catalysts with high H₂O₂ selectivity and production rate remains challenging. Herein, an elaborate design with fine control over MOFs at both atomic and nano-scale is demonstrated, enabling the well-known Zn/Co bimetallic zeolite imidazole frameworks (ZnCo-ZIFs) as excellent 2e-ORR electrocatalysts. Experimental results combined with density functional theory simulation have shown that the atomic level control can regulate the role of water molecules participating in the ORR process, and the morphology control over desired facet exposure adjusts the coordination unsaturation degree of active sites. The structural regulation at two length scales leads to synchronous control over both the kinetics and thermodynamics for ORR on bimetallic ZIF catalysts. The optimized ZnCo-ZIF with a Zn/Co molar ratio of 9/1 and predominant {001} facet exposure exhibits a high 2e^- selectivity of ∼100% and a H₂O₂ yield of 4.35 mol g_cat^-1 h^-1. The findings pave a new avenue toward the development of multivariate MOFs as advanced 2e-ORR electrocatalysts.

Nonheme Iron(III) Azide and Iron(III) Isothiocyanate Complexes: Radical Rebound Reactivity, Selectivity, and Catalysis

The new nonheme iron complexes FeII(BNPAPh2O)(N3) (1), FeIII(BNPAPh2O)(OH)(N3) (2), FeII(BNPAPh2O)(OH) (3), FeIII(BNPAPh2O)(OH)(NCS) (4), FeII(BNPAPh2O)(NCS) (5), FeIII(BNPAPh2O)(NCS)2 (6), and FeIII(BNPAPh2O)(N3)2 (7) (BNPAPh2O = 2-(bis((6-(neopentylamino)pyridin-2-yl) methyl)amino)-1,1-diphenylethanolate) were synthesized and characterized by single crystal X-ray diffraction (XRD), as well as by 1H NMR, 57Fe Mössbauer, and ATR-IR spectroscopies. Complex 2 was reacted with a series of carbon radicals, ArX3C· (ArX = p-X-C6H4), analogous to the proposed radical rebound step for nonheme iron hydroxylases and halogenases. The results show that for ArX3C· (X = Cl, H, tBu), only OH· transfer occurs to give ArX3COH. However, when X = OMe, a mixture of alcohol (ArX3COH) (30%) and azide (ArX3CN3) (40%) products was obtained. These data indicate that the rebound selectivity is influenced by the electron-rich nature of the carbon radicals for the azide complex. Reaction of 2 with Ph3C· in the presence of Sc3+ or H+ reverses the selectivity, giving only the azide product. In contrast to the mixed selectivity seen for 2, the reactivity of cis-FeIII(OH)(NCS) with the X = OMe radical derivative leads only to hydroxylation. Catalytic azidation was achieved with 1 as catalyst, λ3-azidoiodane as oxidant and azide source, and Ph3CH as test substrate, giving Ph3CN3 in 84% (TON = 8). These studies show that hydroxylation is favored over azidation for nonheme iron(III) complexes, but the nature of the carbon radical can alter this selectivity. If an OH· transfer pathway can be avoided, the FeIII(N3) complexes are capable of mediating both stoichiometric and catalytic azidation.

The effect of a lateral alkyloxy chain on the ferroelectric nematic phase

The synthesis and characterisation of two series of low molar mass liquid crystals, the 4-[(4-nitrophenoxy)carbonyl]phenyl 2-alkoxy-4-methoxybenzoates (series 5-m) and the 4-[(3-fluoro-4-nitrophenoxy)carbonyl]phenyl 2-alkoxy-4-methoxybenzoates (series 6-m) are reported in order to explore the effects of a lateral alkyloxy chain on the formation and stability of the recently discovered ferroelectric nematic phase. In both series m, the number of carbon atoms in the lateral chain, is varied from one to nine. The two series differ by the addition of a fluorine substituent in the 6-m series. 5-1 is the extensively studied ferroelectric nematogen RM734. All the members of the 5-m series exhibited both a conventional nematic, N, and ferroelectric nematic, N_F, phase, whereas all the members of the 6-m series exhibit a direct N_F-I transition with the exception of 6-1 that also exhibits a N phase. The replacement of a hydrogen atom by a fluorine atom reduces the nematic-isotropic transition temperature, T _NI, whereas the ferroelectric nematic-nematic, or isotropic, transition temperature, T _NFN/I, increases. This is interpreted in terms of the reduced structural anisotropy associated with the larger fluorine atom whereas the increase in the stability of the N_F phase reflects changes in polarity and polarizability. The dependence of T _NI and T _NFN/I on m in both series is similar, and these initially decrease on increasing m but converge to limiting values on further increasing m. This suggests that the lateral alkyloxy chain may adopt conformations in which it lies along the major axis of the mesogenic unit.

Combining Structural with Functional Model Properties in Iron Synthetic Analogue Complexes for the Active Site in Rabbit Lipoxygenase

Iron complexes that model the structural and functional properties of the active iron site in rabbit lipoxygenase are described. The ligand sphere of the mononuclear pseudo-octahedral cis-(carboxylato)(hydroxo)iron(III) complex, which is completed by a tetraazamacrocyclic ligand, reproduces the first coordination shell of the active site in the enzyme. In addition, two corresponding iron(II) complexes are presented that differ in the coordination of a water molecule. In their structural and electronic properties, both the (hydroxo)iron(III) and the (aqua)iron(II) complex reflect well the only two essential states found in the enzymatic mechanism of peroxidation of polyunsaturated fatty acids. Furthermore, the ferric complex is shown to undergo hydrogen atom abstraction reactions with O-H and C-H bonds of suitable substrates, and the bond dissociation free energy of the coordinated water ligand of the ferrous complex is determined to be 72.4 kcal·mol^-1. Theoretical investigations of the reactivity support a concerted proton-coupled electron transfer mechanism in close analogy to the initial step in the enzymatic mechanism. The propensity of the (hydroxo)iron(III) complex to undergo H atom abstraction reactions is the basis for its catalytic function in the aerobic peroxidation of 2,4,6-tri(tert-butyl)phenol and its role as a radical initiator in the reaction of dihydroanthracene with oxygen.