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Hou R, Zhang C, Xu L, Ding Y, Xu W. Construction of metal-organic nanostructures and their structural transformations on metal surfaces. Phys Chem Chem Phys 2025. [PMID: 40226976 DOI: 10.1039/d5cp00030k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/15/2025]
Abstract
Metal-organic nanostructures, composed of organic molecules as building blocks and metal atoms as linkers, exhibit high reversibility and flexibility and open up new vistas for the creation of novel metal-organic nanomaterials and the fabrication of functional molecule-based nanodevices. With the rapid development of emerging surface science and scanning probe microscopy, various metal-organic nanostructures, ranging from zero to two dimensions, have been prepared with atomic precision on well-defined metal surfaces in a bottom-up manner and further visualized at the submolecular (or even atomic) level. In such processes, the metal-organic interactions involved and the synergy and competition of multiple intermolecular interactions have been clearly discriminated as the cause of the diversity and preference of metal-organic nanostructures. Moreover, structural transformations can be controllably directed by subtly tuning such intermolecular interactions. In this perspective, we review recent exciting progress in the construction of metal-organic nanostructures on metal surfaces ranging from zero to two dimensions, which is mainly in terms of the selection of metal types (including sources), in other words, different metal-organic interactions formed. Subsequently, the corresponding structural transformations in response to internal or external conditions are discussed, providing mechanistic insights into precise structural control, e.g., by means of metal/molecule stoichiometric ratios (including through scanning probe microscopy (SPM) manipulations), thermodynamic control, introduction of extrinsic competing counterparts, etc. In addition, some other regulatory factors, such as the functionalization of organic molecules and the choice of substrates and lattices, which also crucially govern the structural transformations, are briefly mentioned in each part. Finally, some potential perspectives for metal-organic nanostructures are evoked.
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Affiliation(s)
- Rujia Hou
- Interdisciplinary Materials Research Center, School of Materials Science and Engineering, Tongji University, Shanghai 201804, People's Republic of China.
| | - Chi Zhang
- Interdisciplinary Materials Research Center, School of Materials Science and Engineering, Tongji University, Shanghai 201804, People's Republic of China.
| | - Lei Xu
- Interdisciplinary Materials Research Center, School of Materials Science and Engineering, Tongji University, Shanghai 201804, People's Republic of China.
| | - Yuanqi Ding
- Interdisciplinary Materials Research Center, School of Materials Science and Engineering, Tongji University, Shanghai 201804, People's Republic of China.
| | - Wei Xu
- Interdisciplinary Materials Research Center, School of Materials Science and Engineering, Tongji University, Shanghai 201804, People's Republic of China.
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2
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Meier D, Knecht P, Vezzoni Vicente P, Eratam F, Xu H, Lee TL, Generalov A, Riss A, Yang B, Allegretti F, Feulner P, Reichert J, Barth JV, Seitsonen AP, Duncan DA, Papageorgiou AC. Octaethyl vs Tetrabenzo Functionalized Ru Porphyrins on Ag(111): Molecular Conformation, Self-Assembly and Electronic Structure. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2025; 129:858-869. [PMID: 39811437 PMCID: PMC11726639 DOI: 10.1021/acs.jpcc.4c06978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2024] [Revised: 11/12/2024] [Accepted: 11/15/2024] [Indexed: 01/16/2025]
Abstract
Metalloporphyrins on interfaces offer a rich playground for functional materials and hence have been subjected to intense scrutiny over the past decades. As the same porphyrin macrocycle on the same surface may exhibit vastly different physicochemical properties depending on the metal center and its substituents, it is vital to have a thorough structural and chemical characterization of such systems. Here, we explore the distinctions arising from coverage and macrocycle substituents on the closely related ruthenium octaethyl porphyrin and ruthenium tetrabenzo porphyrin on Ag(111). Our investigation employs a multitechnique approach in ultrahigh vacuum, combining scanning tunneling microscopy, low-energy electron diffraction, photoelectron spectroscopy, normal incidence X-ray standing wave, and near-edge X-ray absorption fine structure, supported by density functional theory. This methodology allows for a thorough examination of the nuanced differences in the self-assembly, substrate modification, molecular conformation and adsorption height.
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Affiliation(s)
- Dennis Meier
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Peter Knecht
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Pablo Vezzoni Vicente
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | | | - Hongxiang Xu
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | | | | | - Alexander Riss
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Biao Yang
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Francesco Allegretti
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Peter Feulner
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Joachim Reichert
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Johannes V. Barth
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
| | - Ari Paavo Seitsonen
- Département
de Chimie, École Normale Supérieure
(ENS), Paris 75005, France
- Centre
National de la Recherche Scientifique, Université
de Recherche Paris-Sciences-et-Lettres, Sorbonne Université, Paris 75005, France
| | | | - Anthoula C. Papageorgiou
- Technical
University of Munich, TUM School of Natural
Sciences, Physics Department E20, Garching 85748, Germany
- Laboratory
of Physical Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, Panepistimiopolis, Athens 157 71, Greece
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3
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Óvári L, Farkas AP, Palotás K, Vári G, Szenti I, Berkó A, Kiss J, Kónya Z. Hexagonal boron nitride on metal surfaces as a support and template. SURFACE SCIENCE REPORTS 2024; 79:100637. [DOI: 10.1016/j.surfrep.2024.100637] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2025]
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4
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Hassan A, Mollah MMR, Jayashree R, Jain A, Das S, Das N. Ultrafast Removal of Thorium and Uranium from Radioactive Waste and Groundwater Using Highly Efficient and Radiation-Resistant Functionalized Triptycene-Based Porous Organic Polymers. ACS APPLIED MATERIALS & INTERFACES 2024. [PMID: 38687684 DOI: 10.1021/acsami.4c01397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
Thorium (Th) and uranium (U) are important strategic resources in nuclear energy-based heavy industries such as energy and defense sectors that also generate significant radioactive waste in the process. The management of nuclear waste is therefore of paramount importance. Contamination of groundwater/surface water by Th/U is increasing at an alarming rate in certain geographical locations. This necessitates the development of strategic adsorbent materials with improved performance for capturing Th/U species from radioactive waste and groundwater. This report describes the design of a unique, robust, and radiation-resistant porous organic polymer (POP: TP-POP-SO3NH4), which demonstrates ultrafast removal of Th(IV) (<30 s)/U(VI) (<60 s) species present in simulated radioactive wastewater/groundwater samples. Thermal, chemical, and radiation stabilities of these POPs were studied in detail. The synthesized ammoniated POP revealed exceptional capture efficiency for trace-level Th (<4 ppb) and U (<3 ppb) metal ions through the cation-exchange mechanism. TP-POP-SO3NH4 shows a significant sorption capacity [Th (787 mg/g) and U (854 mg/g)] with an exceptionally high distribution coefficient (Kd) of 107 mL/g for Th. This work also demonstrates a facile protocol to convert a nonperforming POP, by simple chemical modifications, into a superfast adsorbent for efficient uptake/removal of U/Th.
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Affiliation(s)
- Atikur Hassan
- Department of Chemistry, Indian Institute of Technology Patna, Patna, Bihar 801106, India
| | - Md Mofizur Rahman Mollah
- Materials Chemistry and Metal Fuel Cycle Group, Indira Gandhi Centre for Atomic Research, Kalpakkam, Tamil Nadu 603102, India
| | - Ravikumar Jayashree
- Materials Chemistry and Metal Fuel Cycle Group, Indira Gandhi Centre for Atomic Research, Kalpakkam, Tamil Nadu 603102, India
| | - Ashish Jain
- Materials Chemistry and Metal Fuel Cycle Group, Indira Gandhi Centre for Atomic Research, Kalpakkam, Tamil Nadu 603102, India
| | - Soumen Das
- Materials Chemistry and Metal Fuel Cycle Group, Indira Gandhi Centre for Atomic Research, Kalpakkam, Tamil Nadu 603102, India
| | - Neeladri Das
- Department of Chemistry, Indian Institute of Technology Patna, Patna, Bihar 801106, India
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5
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Zheng F, Lu J, Zhu Z, Jiang H, Yan Y, He Y, Yuan S, Sun Q. Predicting Molecular Self-Assembly on Metal Surfaces Using Graph Neural Networks Based on Experimental Data Sets. ACS NANO 2023; 17:17545-17553. [PMID: 37611029 DOI: 10.1021/acsnano.3c06405] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/25/2023]
Abstract
The application of supramolecular chemistry on solid surfaces has received extensive attention in the past few decades. To date, combining experiments with quantum mechanical or molecular dynamic methods represents the key strategy to explore the molecular self-assembled structures, which is, however, often laborious. Recently, machine learning (ML) has become one of the most exciting tools in material research, allowing for both efficiency and accuracy in predicting molecular properties. In this work, we constructed a graph neural network to predict the self-assembly of functional polycyclic aromatic hydrocarbons (PAHs) on metal surfaces. Using scanning tunneling microscopy (STM), we characterized the self-assembled nanostructures of a homologous series of PAH molecules on different metal surfaces to construct an experimental data set for model training. Compared with traditional ML algorithms, our model exhibits better predictive performance. Finally, the generalization of the model is further verified by comparing the ML predictions and experimental results of different functionalized molecule. Our results demonstrate training experimental data sets to produce a predictive ML model of molecular self-assembly with generalization performance, which allows for the predictive design of nanostructures with functional molecules.
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Affiliation(s)
- Fengru Zheng
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Jiayi Lu
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Zhiwen Zhu
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Hao Jiang
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Yuyi Yan
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Yu He
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Shaoxuan Yuan
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Qiang Sun
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
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6
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Atomically precise control of rotational dynamics in charged rare-earth complexes on a metal surface. Nat Commun 2022; 13:6305. [PMID: 36273005 PMCID: PMC9588029 DOI: 10.1038/s41467-022-33897-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 10/07/2022] [Indexed: 11/09/2022] Open
Abstract
Complexes containing rare-earth ions attract great attention for their technological applications ranging from spintronic devices to quantum information science. While charged rare-earth coordination complexes are ubiquitous in solution, they are challenging to form on materials surfaces that would allow investigations for potential solid-state applications. Here we report formation and atomically precise manipulation of rare-earth complexes on a gold surface. Although they are composed of multiple units held together by electrostatic interactions, the entire complex rotates as a single unit when electrical energy is supplied from a scanning tunneling microscope tip. Despite the hexagonal symmetry of the gold surface, a counterion at the side of the complex guides precise three-fold rotations and 100% control of their rotational directions is achieved using a negative electric field from the scanning probe tip. This work demonstrates that counterions can be used to control dynamics of rare-earth complexes on materials surfaces for quantum and nanomechanical applications. Rare-earth elements are vital to advanced technological applications ranging from spintronic devices to quantum information science. Here, the authors formed charged rare-earth complexes on a material surface and demonstrated atomically precise control on their rotational dynamics.
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Niu Q, Huang Q, Yu TY, Liu J, Shi JW, Dong LZ, Li SL, Lan YQ. Achieving High Photo/Thermocatalytic Product Selectivity and Conversion via Thorium Clusters with Switchable Functional Ligands. J Am Chem Soc 2022; 144:18586-18594. [PMID: 36191239 DOI: 10.1021/jacs.2c08258] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Structural exploration and functional application of thorium clusters are still very rare on account of their difficult synthesis caused by the susceptible hydrolysis of thorium element. In this work, we elaborately designed and constructed four stable thorium clusters modified with different functionalized capping ligands, Th6-MA, Th6-BEN, Th6-C8A, and Th6-Fcc, which possessed nearly the same hexanuclear thorium-oxo core but different capabilities in light absorption and charge separation. Consequently, for the first time, these new thorium clusters were treated as model catalysts to systematically investigate the light-induced oxidative coupling reaction of benzylamine and thermodriven oxidation of aniline, achieving >90% product selectivity and approximately 100% conversion, respectively. Concurrently, we found that thorium clusters modified by switchable functional ligands can effectively modulate the selectivity and conversion of catalytic reaction products. Moreover, catalytic characterization and density functional theory calculations consistently indicated that these thorium clusters can activate O2/H2O2 to generate active intermediates O2·-/HOO· and then improved the conversion of amines efficiently. Significantly, this work represents the first report of stable thorium clusters applied to photo/thermotriggered catalytic reactions and puts forward a new design avenue for the construction of more efficient thorium cluster catalysts.
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Affiliation(s)
- Qian Niu
- Jiangsu Collaborative Innovation Centre of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, P. R. China
| | - Qing Huang
- School of Chemistry, South China Normal University, Guangzhou 510006, P. R. China
| | - Tao-Yuan Yu
- Jiangsu Collaborative Innovation Centre of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, P. R. China
| | - Jiang Liu
- School of Chemistry, South China Normal University, Guangzhou 510006, P. R. China
| | - Jing-Wen Shi
- Jiangsu Collaborative Innovation Centre of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, P. R. China
| | - Long-Zhang Dong
- School of Chemistry, South China Normal University, Guangzhou 510006, P. R. China
| | - Shun-Li Li
- School of Chemistry, South China Normal University, Guangzhou 510006, P. R. China
| | - Ya-Qian Lan
- Jiangsu Collaborative Innovation Centre of Biomedical Functional Materials, Jiangsu Key Laboratory of New Power Batteries, School of Chemistry and Materials Science, Nanjing Normal University, Nanjing 210023, P. R. China.,School of Chemistry, South China Normal University, Guangzhou 510006, P. R. China
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8
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Lin X, Mo Y. On the Bonding Nature in the Crystalline Tri-Thorium Cluster: Core-Shell Syngenetic σ-Aromaticity. Angew Chem Int Ed Engl 2022; 61:e202209658. [PMID: 35856937 PMCID: PMC9541753 DOI: 10.1002/anie.202209658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Indexed: 11/10/2022]
Abstract
A unique thorium-thorium bond was observed in the crystalline tri-thorium cluster [{Th(η8 -C8 H8 )(μ3 -Cl)2 }3 {K(THF)2 }2 ]∞ , though the claim of σ-aromaticity for Th3 bond has been questioned. Herein, a new type of core-shell syngenetic bonding model is proposed to describe the stability of this tri-thorium cluster. The model involves a 3c-2e bond in the Th3 core and a multicentered (ThCl2 )3 charge-shift bond with 12 electrons scattering along the outer shell. To differentiate the strengths of the 3c-2e bond and the charge-shift bond, the block-localized wavefunction (BLW) method which falls into the ab initio valence bond (VB) theory is employed to construct a strictly core/shell localized state and its contributing covalent resonance structure for the Th3 core bond. By comparing with the σ-aromatic H3 + and nonaromatic Li3 + , the computed resonance energies and extra cyclic resonance energies confirm that this Th3 core bond is truly delocalized and σ-aromatic.
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Affiliation(s)
- Xuhui Lin
- Sichuan Engineering Research Center for Biomimetic Synthesis of Natural DrugsSchool of Life Science and EngineeringSouthwest Jiaotong UniversityChengdu610031China
| | - Yirong Mo
- Department of NanoscienceJoint School of Nanoscience and NanoengineeringUniversity of North Carolina at GreensboroGreensboroNC 27401USA
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9
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Lu J, Jiang H, Yan Y, Zhu Z, Zheng F, Sun Q. High-Throughput Preparation of Supramolecular Nanostructures on Metal Surfaces. ACS NANO 2022; 16:13160-13167. [PMID: 35862580 DOI: 10.1021/acsnano.2c06294] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
One of the contemporary challenges in materials science lies in the rapid materials screening and discovery. Experimental sample libraries can be generated by high-throughput parallel synthesis to map the composition space for rapid material discoveries. Molecular self-assembly on surfaces has proved a useful way to construct nanostructures with interesting topologies or properties. Despite the strong dependence of molecular stoichiometry on the structures, high-throughput preparations of supramolecular surface nanostructures have been far less explored. Here, by integrating a physical mask into the standard ultra-high-vacuum (UHV) molecular preparation system we show a high-throughput approach for preparing supramolecular nanostructures of continuous composition spreads on metal surfaces. The spatially addressable sample libraries of supramolecular self-assemblies are characterized by high-resolution scanning probe microscopy. We could explore different binary nanostructures of varying molecular ratios on one single substrate. Moreover, we use the minimum spanning tree approach to qualitatively and quantitatively study the structural properties of the formed nanostructures. This high-throughput approach may accelerate the screening and exploration of surface-supported, low-dimensional nanostructures not limited to supramolecular interactions.
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Affiliation(s)
- Jiayi Lu
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Hao Jiang
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Yuyi Yan
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Zhiwen Zhu
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Fengru Zheng
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
| | - Qiang Sun
- Materials Genome Institute, Shanghai University, 200444 Shanghai, China
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10
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Lin X, Mo Y. On the Bonding Nature in the Crystalline Tri‐Thorium Cluster: Core‐Shell Syngenetic σ‐Aromaticity. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202209658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Xuhui Lin
- Southwest Jiaotong University School of Life Science and Engineering CHINA
| | - Yirong Mo
- University of North Carolina at Greensboro Department of Nanoscience 2907 E. Gate City Blvd 27401 Greensboro UNITED STATES
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11
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Vargas-Zúñiga GI, Boreen MA, Mangel DN, Arnold J, Sessler JL. Porphyrinoid actinide complexes. Chem Soc Rev 2022; 51:3735-3758. [PMID: 35451437 DOI: 10.1039/d2cs00107a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The diverse coordination modes and electronic features of actinide complexes of porphyrins and related oligopyrrolic systems (referred to as "porpyrinoids") have been the subject of interest since the 1960s. Given their stability and accessibility, most work with actinides has focused on thorium and uranium. This trend is also seen in the case of porphyrinoid-based complexation studies. Nevertheless, the diversity of ligand environments provided by porphyrinoids has led to the stabilization of a number of unique complexes with the early actinides that are often without structural parallel within the broader coordination chemical lexicon. This review summarizes key examples of prophyrinoid actinide complexes reported to date, including the limited number of porphyrinoid systems involving transuranic elements. The emphasis will be on synthesis and structure; however, the electronic features and reactivity pattern of representative systems will be detailed as well. Coverage is through December of 2021.
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Affiliation(s)
- Gabriela I Vargas-Zúñiga
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street, Stop A5300, Austin, Texas 78712, USA.
| | - Michael A Boreen
- Department of Chemistry, University of California, Berkeley, CA 94720, USA.
| | - Daniel N Mangel
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street, Stop A5300, Austin, Texas 78712, USA.
| | - John Arnold
- Department of Chemistry, University of California, Berkeley, CA 94720, USA.
| | - Jonathan L Sessler
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street, Stop A5300, Austin, Texas 78712, USA.
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