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Kundu S, Maji MS. Solution-Phase Late-Stage Chemoselective Photocatalytic Removal of Sulfonyl and Phenacyl Groups in Peptides. Chemistry 2024; 30:e202400033. [PMID: 38345998 DOI: 10.1002/chem.202400033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Indexed: 03/07/2024]
Abstract
Herein, BPC catalyzed visible-light-triggered target-specific late-stage solution phase desulfonylation from tryptophan in oligopeptides is portrayed by overcoming the isolation issue up to octamers. This robust and mild method is highly predictable and chemoselective, tolerating myriad of functional groups in aza-heteroaromatics and peptides. Interestingly, reductive desulfonylation is also amenable to biologically significant reactive histidine and tyrosine side chains, signifying the versatility of the strategy. Additional efficacy of BPC is demonstrated by solution phase phenacyl deprotection from C-terminal in peptides. Furthermore, excellent catalyst loading of 0.5 mol% and recyclability demonstrate the practical utility and applicability of this strategy.
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Affiliation(s)
- Samrat Kundu
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India
| | - Modhu Sudan Maji
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721302, West Bengal, India
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He J, Ghosh P, Nitsche C. Biocompatible strategies for peptide macrocyclisation. Chem Sci 2024; 15:2300-2322. [PMID: 38362412 PMCID: PMC10866349 DOI: 10.1039/d3sc05738k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Accepted: 01/04/2024] [Indexed: 02/17/2024] Open
Abstract
Peptides are increasingly important drug candidates, offering numerous advantages over conventional small molecules. However, they face significant challenges related to stability, cellular uptake and overall bioavailability. While individual modifications may not address all these challenges, macrocyclisation stands out as a single modification capable of enhancing affinity, selectivity, proteolytic stability and membrane permeability. The recent successes of in situ peptide modifications during screening in combination with genetically encoded peptide libraries have increased the demand for peptide macrocyclisation reactions that can occur under biocompatible conditions. In this perspective, we aim to distinguish biocompatible conditions from those well-known examples that are fully bioorthogonal. We introduce key strategies for biocompatible peptide macrocyclisation and contextualise them within contemporary screening methods, providing an overview of available transformations.
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Affiliation(s)
- Junming He
- Research School of Chemistry, Australian National University Canberra ACT Australia
| | - Pritha Ghosh
- Research School of Chemistry, Australian National University Canberra ACT Australia
| | - Christoph Nitsche
- Research School of Chemistry, Australian National University Canberra ACT Australia
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McGrory R, Clarke R, Marshall O, Sutherland A. Fluorescent α-amino acids via Heck-Matsuda reactions of phenylalanine-derived arenediazonium salts. Org Biomol Chem 2023; 21:6932-6939. [PMID: 37580965 DOI: 10.1039/d3ob01096a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/16/2023]
Abstract
The Heck-Matsuda coupling reaction of arenediazonium salts derived from L-phenylalanine with various alkenes has been developed. A two-step process involving the preparation of a tetrafluoroborate diazonium salt from a 4-aminophenylalanine derivative, followed by a palladium(0)-catalysed Heck-Matsuda coupling reaction allowed access to a range of unnatural α-amino acids with cinnamate, vinylsulfone and stilbene side-chains. Analysis of the photophysical properties of these unnatural α-amino acids demonstrated that the (E)-stilbene analogues exhibited fluorescent properties with red-shifted absorption and emission spectra and larger quantum yields than L-phenylalanine.
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Affiliation(s)
- Rochelle McGrory
- School of Chemistry, University of Glasgow, The Joseph Black Building, Glasgow, G12 8QQ, UK.
| | - Rebecca Clarke
- School of Chemistry, University of Glasgow, The Joseph Black Building, Glasgow, G12 8QQ, UK.
| | - Olivia Marshall
- School of Chemistry, University of Glasgow, The Joseph Black Building, Glasgow, G12 8QQ, UK.
| | - Andrew Sutherland
- School of Chemistry, University of Glasgow, The Joseph Black Building, Glasgow, G12 8QQ, UK.
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Costa L, Sousa E, Fernandes C. Cyclic Peptides in Pipeline: What Future for These Great Molecules? Pharmaceuticals (Basel) 2023; 16:996. [PMID: 37513908 PMCID: PMC10386233 DOI: 10.3390/ph16070996] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 07/06/2023] [Accepted: 07/08/2023] [Indexed: 07/30/2023] Open
Abstract
Cyclic peptides are molecules that are already used as drugs in therapies approved for various pharmacological activities, for example, as antibiotics, antifungals, anticancer, and immunosuppressants. Interest in these molecules has been growing due to the improved pharmacokinetic and pharmacodynamic properties of the cyclic structure over linear peptides and by the evolution of chemical synthesis, computational, and in vitro methods. To date, 53 cyclic peptides have been approved by different regulatory authorities, and many others are in clinical trials for a wide diversity of conditions. In this review, the potential of cyclic peptides is presented, and general aspects of their synthesis and development are discussed. Furthermore, an overview of already approved cyclic peptides is also given, and the cyclic peptides in clinical trials are summarized.
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Affiliation(s)
- Lia Costa
- Laboratório de Química Orgânica e Farmacêutica, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal;
- Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), Edifício do Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4050-208 Matosinhos, Portugal
| | - Emília Sousa
- Laboratório de Química Orgânica e Farmacêutica, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal;
- Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), Edifício do Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4050-208 Matosinhos, Portugal
| | - Carla Fernandes
- Laboratório de Química Orgânica e Farmacêutica, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal;
- Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), Edifício do Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4050-208 Matosinhos, Portugal
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Sokhna S, Seck I, Thiam IEH, Presset M, Ndoye SF, Ba LA, Samb I, Coles S, Orton J, Seck M, Le Gall E, Gaye M. Syntheses and crystal structure of 4-[(pyridin-3-yl)diazen-yl]morpholine and 1-[(pyridin-3-yl)diazen-yl]-1,2,3,4-tetra-hydro-quinoline. Acta Crystallogr E Crystallogr Commun 2023; 79:74-78. [PMID: 36793402 PMCID: PMC9912458 DOI: 10.1107/s2056989023000129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 01/04/2023] [Indexed: 01/12/2023]
Abstract
Two new heterocyclic 1,2,3-triazenes were synthesized by diazo-tation of 3-amino-pyridine following respectively by coupling with morpholine or 1,2,3,4-tetra-hydro-quinoline. 4-[(Pyridin-3-yl)diazen-yl]morpholine (I), C9H12N4O, has monoclinic P21/c symmetry at 100 K, while 1-[(pyridin-3-yl)diazen-yl]-1,2,3,4-tetra-hydro-quinoline (II), C14H14N4, has monoclinic P21/n symmetry at 100 K. These 1,2,3-triazene derivatives were synthesized by the organic medium method by coupling reactions of 3-amino-pyridine with morpholine and 1,2,3,4-tetra-hydro-quinoline, respectively, and characterized by 1H NMR, 13C NMR, IR, mass spectrometry, and single-crystal X-ray diffraction. The mol-ecule of compound I consists of pyridine and morpholine rings connected by an azo moiety (-N=N-). In the mol-ecule of II, the pyridine ring and the 1,2,3,4-tetra-hydro-quinoline unit are also connected by an azo moiety. The double- and single-bond distances in the triazene chain are comparable for the two compounds. In both crystal structures, the mol-ecules are connected by C-H⋯N inter-actions, forming infinite chains for I and layers parallel to the bc plane for II.
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Affiliation(s)
- Seynabou Sokhna
- Laboratoire de Chimie Organique et Thérapeutique, Faculté de Médecine, de Pharmacie et Odontologie, Université Cheikh Anta, Diop de Dakar, BP 5005, Dakar-Fann, Senegal
| | - Insa Seck
- Laboratoire de Chimie Organique et Thérapeutique, Faculté de Médecine, de Pharmacie et Odontologie, Université Cheikh Anta, Diop de Dakar, BP 5005, Dakar-Fann, Senegal
| | - Ibrahima El Hadj Thiam
- Laboratoire de Chimie de Coordination Organique, Département de Chimie, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal
| | - Marc Presset
- UMR 7182 - ICMPE - Institut de Chimie et des Matériaux Paris Est, Thiais, France
| | - Samba Fama Ndoye
- Laboratoire de Chimie Organique et Thérapeutique, Faculté de Médecine, de Pharmacie et Odontologie, Université Cheikh Anta, Diop de Dakar, BP 5005, Dakar-Fann, Senegal
| | - Lalla Aïcha Ba
- Université Amadou Mahtar MBOW, BP 45927, Dakar Nafa VDN, Dakar-Fann, Senegal
| | - Issa Samb
- Equipe de Recherche Chimie Organique et Thérapeutique (ECOT), Université Alioune, Diop de Bambey,Senegal
| | - Simon Coles
- UK National Crystallography Service, School of Chemistry, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
| | - James Orton
- UK National Crystallography Service, School of Chemistry, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
| | - Matar Seck
- Laboratoire de Chimie Organique et Thérapeutique, Faculté de Médecine, de Pharmacie et Odontologie, Université Cheikh Anta, Diop de Dakar, BP 5005, Dakar-Fann, Senegal
| | - Erwan Le Gall
- UMR 7182 - ICMPE - Institut de Chimie et des Matériaux Paris Est, Thiais, France
| | - Mohamed Gaye
- Laboratoire de Chimie de Coordination Organique, Département de Chimie, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal,Correspondence e-mail:
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Lahmy R, Hübner H, Schmidt MF, Lachmann D, Gmeiner P, König B. Photochromic Fentanyl Derivatives for Controlled μ-Opioid Receptor Activation. Chemistry 2022; 28:e202201515. [PMID: 35899620 PMCID: PMC9826449 DOI: 10.1002/chem.202201515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Indexed: 01/11/2023]
Abstract
Photoswitchable ligands as biological tools provide an opportunity to explore the kinetics and dynamics of the clinically relevant μ-opioid receptor. These ligands can potentially activate or deactivate the receptor when desired by using light. Spatial and temporal control of biological activity allows for application in a diverse range of biological investigations. Photoswitchable ligands have been developed in this work, modelled on the known agonist fentanyl, with the aim of expanding the current "toolbox" of fentanyl photoswitchable ligands. In doing so, ligands have been developed that change geometry (isomerize) upon exposure to light, with varying photophysical and biochemical properties. This variation in properties could be valuable in further studying the functional significance of the μ-opioid receptor.
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Affiliation(s)
- Ranit Lahmy
- Institute of Organic ChemistryDepartment of Chemistry and PharmacyUniversity of Regensburg93053RegensburgGermany
| | - Harald Hübner
- Department of Chemistry and PharmacyFriedrich Alexander University91052ErlangenGermany
| | - Maximilian F. Schmidt
- Department of Chemistry and PharmacyFriedrich Alexander University91052ErlangenGermany
| | - Daniel Lachmann
- Institute of Organic ChemistryDepartment of Chemistry and PharmacyUniversity of Regensburg93053RegensburgGermany
| | - Peter Gmeiner
- Department of Chemistry and PharmacyFriedrich Alexander University91052ErlangenGermany
| | - Burkhard König
- Institute of Organic ChemistryDepartment of Chemistry and PharmacyUniversity of Regensburg93053RegensburgGermany
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