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Catalán AC, Peña-Zarate L, Cervantes R, Vela A, Tiburcio J. Macrocycle Unidirectional Transport Along a Linear Molecule by a Two-Step Chemical Reaction Sequence. ChemistryOpen 2025; 14:e202400244. [PMID: 39468858 DOI: 10.1002/open.202400244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Revised: 08/29/2024] [Indexed: 10/30/2024] Open
Abstract
Chemical systems displaying directional motions are relevant to the operation of artificial molecular machines. Herein we present the functioning of a molecule capable of transporting a cyclic species in a preferential direction. Our system is based on a linear, non-symmetric, positively charged molecule. This cation integrates into its structure two different reactive regions. On one side features a bulky ester group that can be exchanged by a smaller substituent; the other extreme contains an acid/base responsive moiety that plays a dual role, as part of the recognition motif and as a terminal group. In the acidic state, a dibenzo-24-crown-8 ether slides into the linear component attracted by the positively charged recognition site. It does this selectively through the extreme that contains the azepanium group, since the other side is sterically hindered. After base addition, intermolecular interactions are lost; however, the macrocycle is unable to escape from the linear component since the energy barrier to slide over the neutral azepane is too large. Therefore, a metastable mechanically interlocked molecule is formed. A second reaction, now on the ester functionality, exchanges the bulky mesityl for a methyl group, small enough to allow macrocycle dissociation, completing the directional transit of the ring along the track.
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Affiliation(s)
- Aldo C Catalán
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Lucio Peña-Zarate
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Ruy Cervantes
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Alberto Vela
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
| | - Jorge Tiburcio
- Department of Chemistry, Center for Research and Advanced Studies (Cinvestav), Avenida IPN 2508, 07360, Mexico City, Mexico
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2
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Yang L, Wang Y, Liu G, Zhao J, Cheng L, Zhang Z, Bai R, Liu Y, Yang M, Yu W, Yan X. Mechanically Interlocked Polyrotaxane Networks with Collective Motions of Multiple Main-Chain Mechanical Bonds. Angew Chem Int Ed Engl 2024; 63:e202410834. [PMID: 38949776 DOI: 10.1002/anie.202410834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2024] [Revised: 06/30/2024] [Accepted: 07/01/2024] [Indexed: 07/02/2024]
Abstract
Type I main-chain polyrotaxanes (PRs) with multiple wheels threaded onto the axle are widely employed to design slide-ring materials. However, Type II main-chain PRs with axles threading into the macrocycles on the polymer backbones have rarely been studied, although they feature special topological structures and dynamic characteristics. Herein, we report the design and preparation of Type II main-chain PR-based mechanically interlocked networks (PRMINs), based on which the relationship between microscopic motion of mechanical bonds on the PRs and macroscopic mechanical performance of materials has been revealed. The representative PRMIN-2 exhibits a robust feature in tensile tests with high stretchability (1680 %) and toughness (47.5 MJ/m3). Moreover, it also has good puncture performance with puncture energy of 22.0 mJ. Detailed rheological measurements and coarse-grained molecular dynamics (CGMD) simulation reveal that the embedded multiple [2]rotaxane mechanical bonds on the PR backbones of PRMINs could undergo a synergistic long-range sliding motion under external force, with the introduction of collective dangling chains into the network. As a result, the synchronized motions of coherent PR chains can be readily activated to accommodate network deformation and efficiently dissipate energy, thereby leading to enhanced mechanical performances of PRMINs.
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Affiliation(s)
- Li Yang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Yuanhao Wang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Guoquan Liu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Jun Zhao
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Lin Cheng
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Zhaoming Zhang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Ruixue Bai
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Yuhang Liu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Mengling Yang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Wei Yu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Xuzhou Yan
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
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3
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Lee CK, Feng Y, Tajik M, Violi JP, Donald WA, Stoddart JF, Kim DJ. Concise and Efficient Synthesis of Sequentially Isomeric Hetero[3]rotaxanes. J Am Chem Soc 2024; 146:27109-27116. [PMID: 39305255 DOI: 10.1021/jacs.4c09406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/03/2024]
Abstract
Stereoisomerism, stemming from the spatial orientation of components in molecular structures, plays a decisive role in nature. While the unconventional bonding found in mechanically interlocked molecules gives rise to unique expressions of stereochemistry, the exploration of their stereoisomers is still in its infancy. Sequence isomerism, characterized by variations in the ordering of mechanically interlocked components in catenanes and rotaxanes, mirrors the sequence variations found in biological macromolecules. Herein, we report the use of artificial molecular pumps for the precise and simple production of sequentially isomeric hetero[3]rotaxanes. Utilizing redox-driven pumping cassettes with different rings, we have synthesized two hetero[3]rotaxane isomers in high isolated yields from two [2]rotaxanes. This research represents a significant advance in sequential molecular assembly, paving the way for the development of sophisticated, functionalized, mechanically interlocked materials.
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Affiliation(s)
- Christopher K Lee
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
| | - Yuanning Feng
- Department of Chemistry and Biochemistry, The University of Oklahoma, 101 Stephenson Parkway, Norman, Oklahoma 73019, United States
| | - Mohammad Tajik
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
| | - Jake P Violi
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
| | - William A Donald
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
| | - J Fraser Stoddart
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, Zhejiang 311215, China
- Department of Chemistry, The University of Hong Kong, Hong Kong SAR 999077, China
| | - Dong Jun Kim
- School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia
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4
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Lee CK, Gangadharappa C, Fahrenbach AC, Kim DJ. Harnessing Radicals: Advances in Self-Assembly and Molecular Machinery. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2408271. [PMID: 39177115 DOI: 10.1002/adma.202408271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Revised: 07/25/2024] [Indexed: 08/24/2024]
Abstract
Radicals, with their unpaired electrons, exhibit unique chemical and physical properties that have long intrigued chemists. Despite early skepticism about their stability, the discovery of persistent radicals has opened new possibilities for molecular interactions. This review examines the mechanisms and applications of radically driven self-assembly, focusing on key motifs such as naphthalene diimides, tetrathiafulvalenes, and viologens, which serve as models for radical assembly. The potential of radical interactions in the development of artificial molecular machines (AMMs) are also discussed. These AMMs, powered by radical-radical interactions, represent significant advancements in non-equilibrium chemistry, mimicking the functionalities of biological systems. From molecular switches to ratchets and pumps, the versatility and unique properties of radically powered AMMs are highlighted. Additionally, the applications of radical assembly in materials science are explored, particularly in creating smart materials with redox-responsive properties. The review concludes by comparing AMMs to biological molecular machines, offering insights into future directions. This overview underscores the impact of radical chemistry on molecular assembly and its promising applications in both synthetic and biological systems.
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Affiliation(s)
| | | | - Albert C Fahrenbach
- School of Chemistry, University of New South Wales, Sydney, NSW, 2052, Australia
- Australian Centre for Astrobiology, University of New South Wales, Sydney, NSW, 2052, Australia
- UNSW RNA Institute, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Dong Jun Kim
- School of Chemistry, University of New South Wales, Sydney, NSW, 2052, Australia
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5
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Saura-Sanmartin A. Synthesis of 'Impossible' Rotaxanes. Chemistry 2024; 30:e202304025. [PMID: 38168751 DOI: 10.1002/chem.202304025] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Revised: 12/31/2023] [Accepted: 01/03/2024] [Indexed: 01/05/2024]
Abstract
'Impossible' rotaxanes, which are constituted by interlocked components without obvious binding motifs, have attracted the interest of the mechanically interlocked molecules (MIMs) community. Within the synthetic efforts reported in the last decades towards the preparation of MIMs, some innovative protocols for accessing 'impossible' rotaxanes have been developed. This short review highlights different selected synthetic examples of 'impossible' rotaxanes, as well as suggests some future directions of this research area.
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Affiliation(s)
- Adrian Saura-Sanmartin
- Departamento de Química Orgánica, Facultad de Química, Universidad de Murcia, Campus de Espinardo, 30100, Murcia, Spain
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Liu S, Zheng J, Wang J, Liu S, Zhang X, Bao D, Zhang P. Preparation and Application of Polyrotaxane Cross-Linking Agent Based on Cyclodextrin in Gel Materials Field. Gels 2023; 9:854. [PMID: 37998944 PMCID: PMC10671154 DOI: 10.3390/gels9110854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 10/24/2023] [Accepted: 10/26/2023] [Indexed: 11/25/2023] Open
Abstract
The cross-linking point of a conventional chemical cross-linking agent is fixed. Therefore, gels that are prepared with a conventional cross-linking agent have poor deformability, strength, shear resistance, and further properties. Some researchers have prepared a new cross-linking agent using cyclodextrin (CD). In a polyrotaxane cross-linking agent, the cross-linking points can slide freely along the molecule chain. The special "slide ring" structure can provide better elongation, strength, and other properties to gels, which can effectively expand the application of the gel's materials. This paper summarizes the preparation methods and applications from different types of CD and compares the improvements of properties (swelling, viscoelastic properties, etc.). In addition, the current results of our group are presented, and some ideas are provided for the development of polyrotaxane cross-linking agents.
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Affiliation(s)
- Siyuan Liu
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Jingxi Zheng
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Jiaqin Wang
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Shanghao Liu
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Xianli Zhang
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Dan Bao
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
| | - Peng Zhang
- School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China; (S.L.); (J.Z.); (J.W.); (S.L.); (X.Z.); (D.B.)
- Chongqing Oil and Gas Chemical Engineering Technology Research Center, Chongqing 401331, China
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Tsai CY, Cheng HT, Chiu SH. Improbable Rotaxanes Constructed From Surrogate Malonate Rotaxanes as Encircled Methylene Synthons. Angew Chem Int Ed Engl 2023; 62:e202308974. [PMID: 37712453 DOI: 10.1002/anie.202308974] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/12/2023] [Accepted: 09/14/2023] [Indexed: 09/16/2023]
Abstract
We have developed a new approach for the synthesis of "improbable" rotaxanes by using malonate-centered rotaxanes as interlocked surrogate precursors. Here, the desired dumbbell-shaped structure can be assembled from two different, completely separate, portions, with the only residual structure introduced from the malonate surrogate being a methylene group. We have synthesized improbable [2]- and [3]rotaxanes with all-hydrocarbon dumbbell-shaped components to demonstrate the potential structural flexibility and scope of the guest species that can be interlocked when using this approach.
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Affiliation(s)
- Chi-You Tsai
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
| | - Hung-Te Cheng
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
| | - Sheng-Hsien Chiu
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
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Han X, Guo C, Xu C, Shi L, Liu B, Zhang Z, Bai Q, Song B, Pan F, Lu S, Zhu X, Wang H, Hao XQ, Song MP, Li X. Water-Soluble Metallo-Supramolecular Nanoreactors for Mediating Visible-Light-Promoted Cross-Dehydrogenative Coupling Reactions. ACS NANO 2023; 17:3723-3736. [PMID: 36757357 DOI: 10.1021/acsnano.2c10856] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Water-soluble metallo-supramolecular cages with well-defined nanosized cavities have a wide range of functions and applications. Herein, we design and synthesize two series of metallo-supramolecular octahedral cages based on the self-assembly of two congeneric truxene-derived tripyridyl ligands modified with two polyethylene glycol (PEG) chains, i.e., monodispersed tetraethylene glycol (TEG) and polydispersed PEG-1000, with four divalent transition metals (i.e., Pd, Cu, Ni, and Zn). The resulting monodispersed cages C1-C4 are fully characterized by electrospray ionization mass spectrometry (ESI-MS), nuclear magnetic resonance (NMR) spectroscopy, and single-crystal X-ray diffraction. The polydispersed cages C5-C8 display good water solubilities and can act as nanoreactors to mediate visible-light-promoted C(sp3)-C(sp2) cross-dehydrogenative coupling reactions in an aqueous phase. In particular, the most robust Pd(II)-linked water-soluble polydispersed nanoreactor C5 is characterized by ESI-MS and capable of mediating the reactions with the highest efficiencies. Detailed host-guest binding studies in conjunction with control studies suggest that these cages could encapsulate the substrates simultaneously inside its hydrophobic cavity while interacting with the photosensitizer (i.e., eosin Y).
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Affiliation(s)
- Xin Han
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
| | - Chenxing Guo
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
- School of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong 518060, China
| | - Chen Xu
- School of Environmental and Chemical Engineering, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212003, China
| | - Linlin Shi
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Binghui Liu
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Zhe Zhang
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou University, Guangzhou, Guangdong 510006, China
| | - Qixia Bai
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou University, Guangzhou, Guangdong 510006, China
| | - Bo Song
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Fangfang Pan
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Department of Chemistry, Central China Normal University, Wuhan, Hubei 430079, China
| | - Shuai Lu
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
| | - Xinju Zhu
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Heng Wang
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
| | - Xin-Qi Hao
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Mao-Ping Song
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou, Henan 450001, China
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
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Han H, Seale JSW, Feng L, Qiu Y, Stoddart JF. Sequence‐controlled synthesis of rotaxanes. JOURNAL OF POLYMER SCIENCE 2023. [DOI: 10.1002/pol.20220691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Han Han
- Department of Chemistry Northwestern University Evanston Illinois USA
| | - James S. W. Seale
- Department of Chemistry Northwestern University Evanston Illinois USA
| | - Liang Feng
- Department of Chemistry Northwestern University Evanston Illinois USA
| | - Yunyan Qiu
- Department of Chemistry National University of Singapore Singapore Republic of Singapore
| | - J. Fraser Stoddart
- Department of Chemistry Northwestern University Evanston Illinois USA
- School of Chemistry University of New South Wales Sydney Australia
- Department of Chemistry, Stoddart Institute of Molecular Science Zhejiang University Hangzhou China
- ZJU‐Hangzhou Global Scientific and Technological Innovation Center Hangzhou China
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