1
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Taguchi J, Tokunaga K, Tabuchi H, Nishiyama T, Kii I, Hosoya T. 1,3-Butadiynyl sulfide-based compact trialkyne platform molecule for sequential assembly of three azides. Chem Commun (Camb) 2024; 60:14581-14584. [PMID: 39499544 DOI: 10.1039/d4cc05205f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2024]
Abstract
A compact trialkyne platform with a silyl-protected 1,3-butadiynyl sulfide moiety and a terminal alkyne group has been developed for sequential regioselective transition metal-catalyzed triazole formation reactions with three azides. This method enabled the facile construction of a low-molecular-weight triazole library and the synthesis of middle-molecular-weight trifunctional probes for protein modification.
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Affiliation(s)
- Jumpei Taguchi
- Chemical Bioscience Team, LBB, IIR, Institute of Science Tokyo, 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Kento Tokunaga
- Chemical Bioscience Team, LBB, IIR, Institute of Science Tokyo, 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Hitomi Tabuchi
- Chemical Bioscience Team, LBB, IIR, Institute of Science Tokyo, 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Takashi Nishiyama
- Laboratory for Drug Target Research, Department of Agriculture, Graduate School of Science and Technology, Shinshu University, 8304 Minami-Minowa, Kami-Ina, Nagano 399-4598, Japan
| | - Isao Kii
- Laboratory for Drug Target Research, Department of Agriculture, Graduate School of Science and Technology, Shinshu University, 8304 Minami-Minowa, Kami-Ina, Nagano 399-4598, Japan
| | - Takamitsu Hosoya
- Chemical Bioscience Team, LBB, IIR, Institute of Science Tokyo, 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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2
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Gribble GW. Naturally Occurring Organohalogen Compounds-A Comprehensive Review. PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2023; 121:1-546. [PMID: 37488466 DOI: 10.1007/978-3-031-26629-4_1] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
The present volume is the third in a trilogy that documents naturally occurring organohalogen compounds, bringing the total number-from fewer than 25 in 1968-to approximately 8000 compounds to date. Nearly all of these natural products contain chlorine or bromine, with a few containing iodine and, fewer still, fluorine. Produced by ubiquitous marine (algae, sponges, corals, bryozoa, nudibranchs, fungi, bacteria) and terrestrial organisms (plants, fungi, bacteria, insects, higher animals) and universal abiotic processes (volcanos, forest fires, geothermal events), organohalogens pervade the global ecosystem. Newly identified extraterrestrial sources are also documented. In addition to chemical structures, biological activity, biohalogenation, biodegradation, natural function, and future outlook are presented.
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Affiliation(s)
- Gordon W Gribble
- Department of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
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3
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Gunnam A, Balasubramani A, Mehta G. Recursive Anion-Triggered Tandem Reactions of ortho-Bis-ynones: Tunable Synthesis of 1-Indenones and Cyclopenta[ a]inden-8(2 H)-ones. J Org Chem 2022; 87:4376-4384. [PMID: 35226482 DOI: 10.1021/acs.joc.2c00057] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Recursive anion-mediated activation of o-bis-ynones sets off a Michael addition-aldol reaction-dehydrative rearrangement cascade, leading to the one-pot synthesis of 1-indenones via orthogonal interplay between the two ortho-ynone moieties. Repeating the recursive anion engagement with the 1-indenones unfolded access to a functionally embellished cyclopenta[a]inden-8(2H)-one core and its spiroannulated analogues either directly or stepwise through tandem 1,6-Michael-type addition-6π electrocyclization and an in situ oxidation sequence.
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Affiliation(s)
- Anilkumar Gunnam
- School of Chemistry, University of Hyderabad, Hyderabad 500 046, India
| | | | - Goverdhan Mehta
- School of Chemistry, University of Hyderabad, Hyderabad 500 046, India
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4
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Abstract
Chemical transformations that rapidly and efficiently construct a high level of molecular complexity in a single step are perhaps the most valuable in total synthesis. Among such transformations is the transition metal catalyzed [2 + 2 + 2] cycloisomerization reaction, which forges three new C-C bonds and one or more rings in a single synthetic operation. We report here a strategy that leverages this transformation to open de novo access to the Veratrum family of alkaloids. The highly convergent approach described herein includes (i) the enantioselective synthesis of a diyne fragment containing the steroidal A/B rings, (ii) the asymmetric synthesis of a propargyl-substituted piperidinone (F ring) unit, (iii) the high-yielding union of the above fragments, and (iv) the intramolecular [2 + 2 + 2] cycloisomerization reaction of the resulting carbon framework to construct in a single step the remaining three rings (C/D/E) of the hexacyclic cevanine skeleton. Efficient late-stage maneuvers culminated in the first total synthesis of heilonine (1), achieved in 21 steps starting from ethyl vinyl ketone.
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Affiliation(s)
- Kyle J. Cassaidy
- Department of Chemistry, University
of Chicago, Chicago, Illinois 60637, United States
| | - Viresh H. Rawal
- Department of Chemistry, University
of Chicago, Chicago, Illinois 60637, United States
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5
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Rycek L, Mateus M, Beytlerová N, Kotora M. Catalytic Cyclotrimerization Pathway for Synthesis of Selaginpulvilins C and D: Scope and Limitations. Org Lett 2021; 23:4511-4515. [PMID: 33724044 DOI: 10.1021/acs.orglett.1c00519] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A facile and unified approach to the main selaginpulvilin's framework was achieved by catalytic [2 + 2 + 2]-cyclotrimerization of a triyne with monosubtituted alkynes. The reaction proceeded with high "ortho" selectivity by using Wilkinson's catalyst (RhCl(PPh3)3) under ambient conditions with reasonable yields. The scope of the reaction with respect to the alkyne as well as the catalytic system was evaluated. The formal total modular syntheses of selaginpulvilin C and D were accomplished by transformation of the cyclotrimerization's products.
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Affiliation(s)
- Lukas Rycek
- Department of Organic Chemistry, Faculty of Science, Charles University, Albertov 6, 128 43 Praha 2, Czech Republic
| | - Miguel Mateus
- Department of Organic Chemistry, Faculty of Science, Charles University, Albertov 6, 128 43 Praha 2, Czech Republic
| | - Nela Beytlerová
- Department of Organic Chemistry, Faculty of Science, Charles University, Albertov 6, 128 43 Praha 2, Czech Republic
| | - Martin Kotora
- Department of Organic Chemistry, Faculty of Science, Charles University, Albertov 6, 128 43 Praha 2, Czech Republic
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6
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Doerksen RS, Hodík T, Hu G, Huynh NO, Shuler WG, Krische MJ. Ruthenium-Catalyzed Cycloadditions to Form Five-, Six-, and Seven-Membered Rings. Chem Rev 2021; 121:4045-4083. [PMID: 33576620 DOI: 10.1021/acs.chemrev.0c01133] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Ruthenium-catalyzed cycloadditions to form five-, six-, and seven-membered rings are summarized, including applications in natural product total synthesis. Content is organized by ring size and reaction type. Coverage is limited to processes that involve formation of at least one C-C bond. Processes that are stoichiometric in ruthenium or exploit ruthenium as a Lewis acid (without intervention of organometallic intermediates), ring formations that occur through dehydrogenative condensation-reduction, σ-bond activation-initiated annulations that do not result in net reduction of bond multiplicity, and photochemically promoted ruthenium-catalyzed cycloadditions are not covered.
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Affiliation(s)
- Rosalie S Doerksen
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
| | - Tomáš Hodík
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
| | - Guanyu Hu
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
| | - Nancy O Huynh
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
| | - William G Shuler
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
| | - Michael J Krische
- Department of Chemistry, University of Texas at Austin,, Welch Hall (A5300), 105 East 24th Street, Austin, Texas 78712, United States
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7
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Silvestri AP, Oakdale JS. Intermolecular cyclotrimerization of haloketoalkynes and internal alkynes: facile access to arenes and phthalides. Chem Commun (Camb) 2020; 56:13417-13420. [PMID: 33035282 DOI: 10.1039/d0cc05706a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A highly chemo- and regioselective cyclo(co)trimerization between 3-halopropiolamides and symmetrical internal alkynes is reported. The reaction is catalyzed by CpRuCl(COD) and proceeds under air at ambient temperature in ethanol with no additional precautions. Iodo-, bromo-, and chloropropiolamides, esters, and ketones are viable coupling partners and, in a 2 : 1 stoichiometry relative to internal alkyne, yield fully-substituted arenes in a single step. The highest regioselectivities (96% single isomer) were observed when employing 2° and 3°-halopropiolamides. A mechanistic hypothesis accounting for this selectivity is proposed. Notably, by using 1,4-butynediol as the internal alkyne, in situ lactonization following [2+2+2]-cycloaddition generates therapeutically-relevant phthalide pharmacophores directly.
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Affiliation(s)
- A P Silvestri
- Department of Chemistry, Scripps Research, 10550 North Torrey Pines Road, La Jolla, California 92037, USA
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8
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Zheng L, Hua R. Recent Advances in Construction of Polycyclic Natural Product Scaffolds via One-Pot Reactions Involving Alkyne Annulation. Front Chem 2020; 8:580355. [PMID: 33195069 PMCID: PMC7596902 DOI: 10.3389/fchem.2020.580355] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2020] [Accepted: 08/31/2020] [Indexed: 12/12/2022] Open
Abstract
Polycyclic scaffolds are omnipresent in natural products and drugs, and the synthetic strategies and methods toward construction of these scaffolds are of particular importance. Compared to simple cyclic ring systems, polycyclic scaffolds have higher structure complexity and diversity, making them suitable for charting broader chemical space, yet bringing challenges for the syntheses. In this review, we surveyed progress in the past decade on synthetic methods for polycyclic natural product scaffolds, in which the key steps are one-pot reactions involving intermolecular or intramolecular alkyne annulation. Synthetic strategies of selected polycyclic carbocycles and heterocycles with at least three fused, bridged, or spiro rings are discussed with emphasis on the synthetic efficiency and product diversity. Recent examples containing newly developed synthetic concepts or toolkits such as collective and divergent total synthesis, gold catalysis, C–H functionalization, and dearomative cyclization are highlighted. Finally, several “privileged synthetic strategies” for “privileged polycyclic scaffolds” are summarized, with discussion of remained challenges and future perspectives.
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Affiliation(s)
- Liyao Zheng
- School of Chemistry and Chemical Engineering, Guangzhou University, Guangzhou, China
| | - Ruimao Hua
- Department of Chemistry, Tsinghua University, Beijing, China
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9
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Torres Ò, Fernàndez M, Díaz-Jiménez À, Pla-Quintana A, Roglans A, Solà M. Examining the Factors That Govern the Regioselectivity in Rhodium-Catalyzed Alkyne Cyclotrimerization. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00347] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Òscar Torres
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
| | - Martí Fernàndez
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
| | - Àlex Díaz-Jiménez
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
| | - Anna Pla-Quintana
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
| | - Anna Roglans
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/Maria Aurèlia Capmany, 69, E-17003 Girona, Catalonia, Spain
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10
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Ma K, Martin BS, Yin X, Dai M. Natural product syntheses via carbonylative cyclizations. Nat Prod Rep 2019; 36:174-219. [PMID: 29923586 DOI: 10.1039/c8np00033f] [Citation(s) in RCA: 95] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This review summarizes the application of various transition metal-catalyzed/mediated carbonylative cyclization reactions in natural product total synthesis.
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Affiliation(s)
- Kaiqing Ma
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Brandon S. Martin
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Xianglin Yin
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Mingji Dai
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
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11
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12
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Raji Reddy C, Warudikar K, Sridhar B. Synthetic Access to Cyclopenta[ a]inden-2(1 H)-ones from Morita-Baylis-Hillman Products of 2-Alkynyl Benzaldehydes. ACS OMEGA 2018; 3:15734-15742. [PMID: 31458226 PMCID: PMC6644149 DOI: 10.1021/acsomega.8b02111] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Accepted: 11/07/2018] [Indexed: 06/10/2023]
Abstract
A new strategy for the synthesis of cyclopenta[a]inden-2(1H)-ones has been developed. An intramolecular Pauson-Khand reaction of the Morita-Baylis-Hillman (MBH) adducts, derived from 2-alkynyl benzaldehydes, provided the consequent novel cyclopenta[a]inden-2(1H)-ones bearing multifunctionalities including an ester group at the fused ring junction (tert-carbon center). The generality of this approach was illustrated by studying the several MBH derivatives containing diverse substitutions/functionalities.
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Affiliation(s)
- Chada Raji Reddy
- Department
of Organic Synthesis & Process Chemistry and Centre for X-Ray
Crystallography, CSIR—Indian Institute
of Chemical Technology, Hyderabad 500007, India
- Academy
of Scientific and Innovative Research (AcSIR), New Delhi 110020, India
| | - Kamalkishor Warudikar
- Department
of Organic Synthesis & Process Chemistry and Centre for X-Ray
Crystallography, CSIR—Indian Institute
of Chemical Technology, Hyderabad 500007, India
- Academy
of Scientific and Innovative Research (AcSIR), New Delhi 110020, India
| | - Balasubramanian Sridhar
- Department
of Organic Synthesis & Process Chemistry and Centre for X-Ray
Crystallography, CSIR—Indian Institute
of Chemical Technology, Hyderabad 500007, India
- Academy
of Scientific and Innovative Research (AcSIR), New Delhi 110020, India
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13
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Nicolaou KC, Li R, Lu Z, Pitsinos EN, Alemany LB, Aujay M, Lee C, Sandoval J, Gavrilyuk J. Streamlined Total Synthesis of Shishijimicin A and Its Application to the Design, Synthesis, and Biological Evaluation of Analogues thereof and Practical Syntheses of PhthNSSMe and Related Sulfenylating Reagents. J Am Chem Soc 2018; 140:12120-12136. [PMID: 30216054 DOI: 10.1021/jacs.8b06955] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Shishijimicin A is a scarce marine natural product with highly potent cytotoxicities, making it a potential payload or a lead compound for designed antibody-drug conjugates. Herein, we describe an improved total synthesis of shishijimicin A and the design, synthesis, and biological evaluation of a series of analogues. Equipped with appropriate functionalities for linker attachment, a number of these analogues exhibited extremely potent cytotoxicities for the intended purposes. The synthetic strategies and tactics developed and employed in these studies included improved preparation of previously known and new sulfenylating reagents such as PhthNSSMe and related compounds.
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Affiliation(s)
| | | | | | - Emmanuel N Pitsinos
- Laboratory of Natural Products Synthesis & Bioorganic Chemistry, Institute of Nanoscience and Nanotechnology , National Centre for Scientific Research "Demokritos" , 153 10 Agia Paraskevi , Greece
| | | | - Monette Aujay
- AbbVie Stemcentrx, LLC , 450 East Jamie Court , South San Francisco , California 94080 , United States
| | - Christina Lee
- AbbVie Stemcentrx, LLC , 450 East Jamie Court , South San Francisco , California 94080 , United States
| | - Joseph Sandoval
- AbbVie Stemcentrx, LLC , 450 East Jamie Court , South San Francisco , California 94080 , United States
| | - Julia Gavrilyuk
- AbbVie Stemcentrx, LLC , 450 East Jamie Court , South San Francisco , California 94080 , United States
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14
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15
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Wang Y, Yuan H, Lu H, Zheng WH. Development of Planar Chiral Iodoarenes Based on [2.2]Paracyclophane and Their Application in Catalytic Enantioselective Fluorination of β-Ketoesters. Org Lett 2018; 20:2555-2558. [DOI: 10.1021/acs.orglett.8b00711] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yang Wang
- State Key Laboratory of Coordination Chemistry, Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing 210023, Jiangsu, China
| | - Hang Yuan
- School of Environment and Chemical Engineering, Jiangsu University of Science and Technology, Zhenjiang 212003, Jiangsu, China
| | - Hongfei Lu
- School of Environment and Chemical Engineering, Jiangsu University of Science and Technology, Zhenjiang 212003, Jiangsu, China
| | - Wen-Hua Zheng
- State Key Laboratory of Coordination Chemistry, Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Avenue, Nanjing 210023, Jiangsu, China
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16
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Kurzawa T, Harms K, Koert U. Stereoselective Synthesis of the Benzodihydropentalene Core of the Fijiolides. Org Lett 2018; 20:1388-1391. [PMID: 29450998 DOI: 10.1021/acs.orglett.8b00163] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
An efficient stereoselective synthesis of the enantiomer of the benzodihydropentalene core of fijiolides A and B has been achieved. The asymmetric conjugate addition of styrylboronic acid to an indenone produced the first stereocenter. Ring C was installed by ring-closing metathesis of a cis disubstituted indanone. Regioselective epoxide opening by NaSePh and subsequent oxidative elimination produced an allylic alcohol. The final introduction of the cyclopentadiene was possible by elimination of an in situ formed triflate.
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Affiliation(s)
- Timon Kurzawa
- Fachbereich Chemie, Philipps-University Marburg , Hans-Meerwein-Strasse 4, D-35043 Marburg, Germany
| | - Klaus Harms
- Fachbereich Chemie, Philipps-University Marburg , Hans-Meerwein-Strasse 4, D-35043 Marburg, Germany
| | - Ulrich Koert
- Fachbereich Chemie, Philipps-University Marburg , Hans-Meerwein-Strasse 4, D-35043 Marburg, Germany
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18
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Abstract
Covering: 2015. Previous review: Nat. Prod. Rep., 2016, 33, 382-431This review covers the literature published in 2015 for marine natural products (MNPs), with 1220 citations (792 for the period January to December 2015) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1340 in 429 papers for 2015), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
| | - Brent R Copp
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Robert A Keyzers
- Centre for Biodiscovery, School of Chemical and Physical Sciences, Victoria University of Wellington, Wellington, New Zealand
| | - Murray H G Munro
- Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
| | - Michèle R Prinsep
- Chemistry, School of Science, University of Waikato, Hamilton, New Zealand
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19
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The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2015. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2016.08.007] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Rinkel J, Dickschat JS. Recent highlights in biosynthesis research using stable isotopes. Beilstein J Org Chem 2015; 11:2493-508. [PMID: 26734097 PMCID: PMC4685789 DOI: 10.3762/bjoc.11.271] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2015] [Accepted: 11/23/2015] [Indexed: 02/03/2023] Open
Abstract
The long and successful history of isotopic labeling experiments within natural products research has both changed and deepened our understanding of biosynthesis. As demonstrated in this article, the usage of isotopes is not at all old-fashioned, but continues to give important insights into biosynthetic pathways of secondary metabolites. This review with 85 cited references is structured by separate discussions of compounds from different classes including polyketides, non-ribosomal peptides, their hybrids, terpenoids, and aromatic compounds formed via the shikimate pathway. The text does not aim at a comprehensive overview, but instead a selection of recent important examples of isotope usage within biosynthetic studies is presented, with a special emphasis on mechanistic surprises.
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Affiliation(s)
- Jan Rinkel
- Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, 53121 Bonn, Germany
| | - Jeroen S Dickschat
- Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, 53121 Bonn, Germany
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