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Pagnoncelli Jr FDB, Losada FB, Alvear MJG, Gonzalez-Andujar JL, Trezzi MM, Bittencourt HVH, Salomão HM. Response characterization and target site mechanism study in glyphosate-resistant populations of Lolium multiflorum L. from Brazil. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2024; 198:105737. [PMID: 38225083 DOI: 10.1016/j.pestbp.2023.105737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 12/03/2023] [Accepted: 12/05/2023] [Indexed: 01/17/2024]
Abstract
Italian ryegrass (Lolium multiflorum L.) is an invasive species widely spread in croplands worldwide. The intensive use of glyphosate has resulted in the selection of resistance to this herbicide in Italian ryegrass. This work characterized the response to glyphosate of Italian ryegrass populations from the South and Southwest regions of Paraná, Brazil. A total of 44 Italian ryegrass populations were collected in farming areas, and were classified for glyphosate resistance with 75% of populations resistant to gloyphosate. Of these, 3 resistant (VT05AR, MR20AR and RN01AR) and three susceptible (VT07AS, MR05AS and RN01AS) of these populations were selected to determine the resistance level and the involvement of the target site mechanisms for glyphosate resistance. Susceptible populations GR50 ranged from 165.66 to 218.17 g.e.a. ha-1 and resistant populations from 569.37 to 925.94, providing RI ranging from 2.88 and 4.70. No mutation in EPSPS was observed in the populations, however, in two (MR20AR and RN02AR) of the three resistant populations, an increase in the number of copies of the EPSPs gene (11 to 57×) was detected. The number of copies showed a positive correlation with the gene expression (R2 = 0.86) and with the GR50 of the populations (R2 = 0.81). The increase in EPSPS gene copies contributes to glyphosate resistance in Italian ryegrass populations from Brazil.
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Affiliation(s)
| | - Francisco Barro Losada
- Department of Plant Breeding, Institute for Sustainable Agriculture (IAS-CSIC), Alameda del Obispo, 14004 Cordoba, Spain
| | - Maria Jose Gimenez Alvear
- Department of Plant Breeding, Institute for Sustainable Agriculture (IAS-CSIC), Alameda del Obispo, 14004 Cordoba, Spain
| | - Jose L Gonzalez-Andujar
- Department of Crop Protection, Institute for Sustainable Agriculture (CSIC), Spain and International Laboratory on Global Change (LINCGlobal) (CSIC), Alameda del Obispo, 14005 Cordoba, Spain
| | - Michelangelo Muzell Trezzi
- Department of Agricultural Sciences, Federal Technological University of Paraná, Via do Conhecimento, km 01, 85503-390 Pato Branco, Paraná, Brazil.
| | - Henrique Von Hertwig Bittencourt
- Department of Agronomy, Federal University of Fronteira Sul, BR-158, s/n, Zona Rural, 85301-970-Laranjeiras do Sul, Paraná, Brazil
| | - Helis Marina Salomão
- Department of Agricultural Sciences, Federal Technological University of Paraná, Via do Conhecimento, km 01, 85503-390 Pato Branco, Paraná, Brazil
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Palma-Bautista C, Vázquez-Garcia JG, López-Valencia G, Domínguez-Valenzuela JA, Barro F, De Prado R. Reduced Glyphosate Movement and Mutation of the EPSPS Gene (Pro106Ser) Endow Resistance in Conyza canadensis Harvested in Mexico. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:4477-4487. [PMID: 36892583 DOI: 10.1021/acs.jafc.2c07833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Glyphosate has been the most widely used herbicide for decades providing a unique tool, alone or in mixtures, to control weeds on citrus in Veracruz. Conyza canadensis has developed glyphosate resistance for the first time in Mexico. The level and mechanisms of resistance of four resistant populations Rs (R1, R2, R3, and R4) were studied and compared with that of a susceptible population (S). Resistance factor levels showed two moderately resistant populations (R2 and R3) and two highly resistant populations (R1 and R4). Glyphosate translocation through leaves to roots was ∼2.8 times higher in the S population than in the four R populations. A mutation (Pro106Ser) in the EPSPS2 gene was identified in the R1 and R4 populations. Mutation in the target site associated with reduced translocation is involved in increased glyphosate resistance in the R1 and R4 populations; whereas for the R2 and R3 populations, it was only mediated by reduced translocation. This is the first study of glyphosate resistance in C. canadensis from Mexico in which the resistance mechanisms involved are described in detail and control alternatives are proposed.
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Affiliation(s)
- Candelario Palma-Bautista
- Agroforestry and Plant Biochemistry, Proteomics and Systems Biology, Department of Biochemistry and Molecular Biology, University of Cordoba, UCO-CeiA3, Cordoba 14014, Spain
| | - José G Vázquez-Garcia
- Agroforestry and Plant Biochemistry, Proteomics and Systems Biology, Department of Biochemistry and Molecular Biology, University of Cordoba, UCO-CeiA3, Cordoba 14014, Spain
| | - Gabriela López-Valencia
- Departamento de Parasitología Agrícola, Universidad Autónoma Chapingo, Texcoco 56230, Estado de México, México
| | | | - Francisco Barro
- Department of Plant Breeding, Institute for Sustainable Agriculture-Spanish National Research Council (IAS-CSIC), Cordoba 14004, Spain
| | - Rafael De Prado
- Agroforestry and Plant Biochemistry, Proteomics and Systems Biology, Department of Biochemistry and Molecular Biology, University of Cordoba, UCO-CeiA3, Cordoba 14014, Spain
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Zhao Y, Ye F, Fu Y. Research Progress on the Action Mechanism of Herbicide Safeners: A Review. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:3639-3650. [PMID: 36794646 DOI: 10.1021/acs.jafc.2c08815] [Citation(s) in RCA: 14] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Herbicide safeners are agricultural chemicals that protect crops from herbicide injury and improve the safety of herbicides and the effectiveness of weed control. Safeners induce and enhance the tolerance of crops to herbicides through the synergism of multiple mechanisms. The principal mechanism is that the metabolic rate of the herbicide in the crop is accelerated by safeners, resulting in the damaging concentration at the site of action being reduced. We focused on discussing and summarizing the multiple mechanisms of safeners to protect crops in this review. It is also emphasized how safeners alleviate herbicide phytotoxicity to crops by regulating the detoxification process and conducting perspectives on future research on the action mechanism of safeners at the molecular level.
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Affiliation(s)
- Yaning Zhao
- Department of Chemistry, College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Fei Ye
- Department of Chemistry, College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Ying Fu
- Department of Chemistry, College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China
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Wu J, Sun X, Wu C, Hong X, Xie L, Shi Z, Zhao L, Du Q, Xiao W, Sun J, Wang J. Single-cell transcriptome analysis reveals liver injury induced by glyphosate in mice. Cell Mol Biol Lett 2023; 28:11. [PMID: 36739397 PMCID: PMC9898913 DOI: 10.1186/s11658-023-00426-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 01/24/2023] [Indexed: 02/06/2023] Open
Abstract
BACKGROUND Glyphosate (GLY), as the active ingredient of the most widely used herbicide worldwide, is commonly detected in the environment and living organisms, including humans. Its toxicity and carcinogenicity in mammals remain controversial. Several studies have demonstrated the hepatotoxicity of GLY; however, the underlying cellular and molecular mechanisms are still largely unknown. METHODS Using single-cell RNA sequencing (scRNA-seq), immunofluorescent staining, and in vivo animal studies, we analyzed the liver tissues from untreated and GLY-treated mice. RESULTS We generated the first scRNA-seq atlas of GLY-exposed mouse liver. GLY induced varied cell composition, shared or cell-type-specific transcriptional alterations, and dysregulated cell-cell communication and thus exerted hepatotoxicity effects. The oxidative stress and inflammatory response were commonly upregulated in several cell types. We also observed activation and upregulated phagocytosis in macrophages, as well as proliferation and extracellular matrix overproduction in hepatic stellate cells. CONCLUSIONS Our study provides a comprehensive single-cell transcriptional picture of the toxic effect of GLY in the liver, which offers novel insights into the molecular mechanisms of the GLY-associated hepatotoxicity.
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Affiliation(s)
- Jiangpeng Wu
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Xiuping Sun
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Chunyi Wu
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Xiaoping Hong
- Department of Rheumatology and Immunology, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Lulin Xie
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Zixu Shi
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China
| | - Liang Zhao
- Department of Pathology, Shunde Hospital, Southern Medical University (The First People's Hospital of Shunde), Foshan, 528300, China
- Department of Pathology and Guangdong Province Key Laboratory of Molecular Tumor Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, 510515, China
| | - Qingfeng Du
- School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, 510515, China.
| | - Wei Xiao
- Key Laboratory of Glucolipid Metabolic Disorder, Ministry of Education, Guangdong Pharmaceutical University, Guangzhou, 510006, China.
- Dongguan Maternal and Child Health Care Hospital, Postdoctoral Innovation Practice Base of Southern Medical University, Dongguan, 523125, Guangdong, China.
| | - Jichao Sun
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China.
| | - Jigang Wang
- Department of Nephrology, Shenzhen Key Laboratory of Kidney Diseases, and Shenzhen Clinical Research Centre for Geriatrics, Shenzhen People's Hospital (The Second Clinical Medical College, Jinan University, The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen, 518020, China.
- School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, 510515, China.
- Dongguan Maternal and Child Health Care Hospital, Postdoctoral Innovation Practice Base of Southern Medical University, Dongguan, 523125, Guangdong, China.
- Artemisinin Research Center, and Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.
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Lu J, Wang W, Zhang C, Xu W, Chen W, Tao L, Li Z, Cheng J, Zhang Y. Characterization of glyphosate-induced cardiovascular toxicity and apoptosis in zebrafish. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 851:158308. [PMID: 36030873 DOI: 10.1016/j.scitotenv.2022.158308] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 08/21/2022] [Accepted: 08/22/2022] [Indexed: 06/15/2023]
Abstract
Glyphosate, the most widely used herbicide, presents new hazards to human health. The developmental toxicity of glyphosate, especially its cardiovascular toxicity, needs to be closely monitored. To understand how glyphosate affects development, we performed toxicity tests on zebrafish embryos that were continuously exposed to glyphosate. The results indicated that glyphosate affected the overall development of zebrafish embryos, including mortality, hatching abnormalities, and decreased body length. At the same time, zebrafish embryos exposed to glyphosate exhibited cardiac malformations, including enlarged chambers, thinned ventricular walls, and rhythm disturbances. In addition, defective intersegmental vasculature occurred after glyphosate exposure, indicating impaired angiogenesis. Mechanistically, apoptosis clustered in the heart and vascular regions and levels of ATP and apoptosis-related genes including caspase-3, caspase-9, bax, and bcl-2 were altered. In summary, the data showed that cardiovascular toxicity caused by glyphosate exposure may be related to apoptosis. Our study provides evidence for a link between glyphosate exposure and cardiovascular developmental toxicity. This raises concerns regarding the health risks of the glyphosate.
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Affiliation(s)
- Jian Lu
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Weiguo Wang
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Cheng Zhang
- Department of Pathology, UT southwestern Medical Center, Dallas, TX 75390, United States
| | - Wenping Xu
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Weidong Chen
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Liming Tao
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Zhong Li
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China
| | - Jiagao Cheng
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China.
| | - Yang Zhang
- Shanghai Key Laboratory of Chemical Biology, School of Pharmacy, East China University of Science and Technology, Shanghai 200237, China.
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Deng W, Duan Z, Li Y, Peng C, Yuan S. Multiple Resistance Mechanisms Involved in Glyphosate Resistance in Eleusine indica. PLANTS (BASEL, SWITZERLAND) 2022; 11:3199. [PMID: 36501239 PMCID: PMC9740094 DOI: 10.3390/plants11233199] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 11/16/2022] [Accepted: 11/21/2022] [Indexed: 06/17/2023]
Abstract
Glyphosate is a non-selective herbicide and is widely used for weed control in non-cultivated land in China. One susceptible (S) and five putative glyphosate-resistant (R1, R2, R3, R4, and R5) Eleusine indica biotypes were selected to investigate their resistance levels and the potential resistance mechanisms. Based on the dose-response assays, the R3 and R5 biotypes showed a low-level (2.4 to 3.5-fold) glyphosate resistance, and the R1, R2, and R4 biotypes exhibited a moderate- to high-level (8.6 to 19.2-fold) resistance, compared with the S biotype. The analysis of the target-site resistance (TSR) mechanism revealed that the P106A mutation and the heterozygous double T102I + P106S mutation were found in the R3 and R4 biotypes, respectively. In addition, the similar EPSPS gene overexpression was observed in the R1, R2, and R5 biotypes, suggesting that additional non-target-site resistance (NTSR) mechanisms may contribute to glyphosate resistance in R1 and R2 biotypes. Subsequently, an RNA-Seq analysis was performed to identify candidate genes involved in NTSR. In total, ten differentially expressed contigs between untreated S and R1 or R2 plants, and between glyphosate-treated S and R1 or R2 plants, were identified and further verified with RT-qPCR. One ATP-binding cassette (ABC) transporter gene, one aldo-keto reductases (AKRs) gene and one cytochrome P450 monooxygenase (CytP450) gene were up-regulated in R1 or R2 plants. These results indicated that EPSPS overexpression, single or double mutation was a common TSR mechanisms in E. indica. Additional NTSR mechanisms could play an essential role in glyphosate resistance. Three genes, ABCC4, AKR4C10, and CYP88, could serve as important candidate genes and deserve further functional studies.
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Barua R, Malone J, Boutsalis P, Gill G, Preston C. Inheritance and mechanism of glyphosate resistance in annual bluegrass (Poa annua L.). PEST MANAGEMENT SCIENCE 2022; 78:1377-1385. [PMID: 34894201 DOI: 10.1002/ps.6754] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Revised: 12/07/2021] [Accepted: 12/11/2021] [Indexed: 06/14/2023]
Abstract
BACKGROUND In initial screening, glyphosate was ineffective in controlling five Poa annua populations. These populations were tested for resistance, and studies undertaken to determine resistance mechanisms and inheritance pattern. RESULTS Dose-response studies conducted at 16/12°C and 27/20°C on the five putative resistant populations showed low-level resistance (1.4- to 2.5-fold) to glyphosate. Shikimic acid accumulation in response to glyphosate confirmed differences among the populations, with greater shikimic acid accumulation in the susceptible population. The EPSPS gene copy number was 0.5- to 5.2-fold greater in one resistant population (HT) than in the susceptible (S) population, but not in the others. EPSPS gene expression was five- to tenfold higher in HT compared with the susceptible population. Target site mutations, differences in glyphosate absorption or translocation or altered expression of aldo-keto reductase (AKR) were not identified in any of the resistant populations. Crosses were successful between one resistant population and the susceptible population (P262-16♂ ✕ S♀) and inheritance of glyphosate resistance appears to be controlled by a single, nuclear dominant gene in this population. CONCLUSION Our study identified EPSPS gene amplification in a South Australian glyphosate-resistant P. annua population (HT). This mechanism of resistance was not identified in the other four glyphosate-resistant populations, and other common mechanisms were excluded. Although the resistance mechanism in some P. annua populations remains unknown, inheritance studies with one population suggest the involvement of a single dominant gene. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Rajesh Barua
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Australia
| | - Jenna Malone
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Australia
| | - Peter Boutsalis
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Australia
| | - Gurjeet Gill
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Australia
| | - Christopher Preston
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Australia
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Wong ACS, Massel K, Lam Y, Hintzsche J, Chauhan BS. Biotechnological Road Map for Innovative Weed Management. FRONTIERS IN PLANT SCIENCE 2022; 13:887723. [PMID: 35548307 PMCID: PMC9082642 DOI: 10.3389/fpls.2022.887723] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Accepted: 04/07/2022] [Indexed: 05/07/2023]
Abstract
In most agriculture farmlands, weed management is predominantly reliant on integrated weed management (IWM) strategies, such as herbicide application. However, the overuse and misuse of herbicides, coupled with the lack of novel active ingredients, has resulted in the uptrend of herbicide-resistant weeds globally. Moreover, weedy traits that contribute to weed seed bank persistence further exacerbate the challenges in weed management. Despite ongoing efforts in identifying and improving current weed management processes, the pressing need for novel control techniques in agricultural weed management should not be overlooked. The advent of CRISPR/Cas9 gene-editing systems, coupled with the recent advances in "omics" and cheaper sequencing technologies, has brought into focus the potential of managing weeds in farmlands through direct genetic control approaches, but could be achieved stably or transiently. These approaches encompass a range of technologies that could potentially manipulate expression of key genes in weeds to reduce its fitness and competitiveness, or, by altering the crop to improve its competitiveness or herbicide tolerance. The push for reducing or circumventing the use of chemicals in farmlands has provided an added incentive to develop practical and feasible molecular approaches for weed management, although there are significant technical, practical, and regulatory challenges for utilizing these prospective molecular technologies in weed management.
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Affiliation(s)
- Albert Chern Sun Wong
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia
- *Correspondence: Albert Chern Sun Wong,
| | - Karen Massel
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia
| | - Yasmine Lam
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia
| | - Jessica Hintzsche
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia
| | - Bhagirath Singh Chauhan
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Gatton, QLD, Australia
- School of Agriculture and Food Sciences, The University of Queensland, Gatton, QLD, Australia
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Yang Y, Gardner C, Gupta P, Peng Y, Piasecki C, Millwood RJ, Ahn TH, Stewart CN. Novel Candidate Genes Differentially Expressed in Glyphosate-Treated Horseweed ( Conyza canadensis). Genes (Basel) 2021; 12:1616. [PMID: 34681011 PMCID: PMC8535903 DOI: 10.3390/genes12101616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Revised: 09/20/2021] [Accepted: 10/08/2021] [Indexed: 11/16/2022] Open
Abstract
The evolution of herbicide-resistant weed species is a serious threat for weed control. Therefore, we need an improved understanding of how gene regulation confers herbicide resistance in order to slow the evolution of resistance. The present study analyzed differentially expressed genes after glyphosate treatment on a glyphosate-resistant Tennessee ecotype (TNR) of horseweed (Conyza canadensis), compared to a susceptible biotype (TNS). A read size of 100.2 M was sequenced on the Illumina platform and subjected to de novo assembly, resulting in 77,072 gene-level contigs, of which 32,493 were uniquely annotated by a BlastX alignment of protein sequence similarity. The most differentially expressed genes were enriched in the gene ontology (GO) term of the transmembrane transport protein. In addition, fifteen upregulated genes were identified in TNR after glyphosate treatment but were not detected in TNS. Ten of these upregulated genes were transmembrane transporter or kinase receptor proteins. Therefore, a combination of changes in gene expression among transmembrane receptor and kinase receptor proteins may be important for endowing non-target-site glyphosate-resistant C. canadensis.
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Affiliation(s)
- Yongil Yang
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA; (Y.Y.); (Y.P.); (C.P.); (R.J.M.)
- Center for Agricultural Synthetic Biology, University of Tennessee, Knoxville, TN 37996, USA
| | - Cory Gardner
- Program in Bioinformatics and Computational Biology, Saint Louis University, St. Louis, MO 63103, USA; (C.G.); (P.G.); (T.-H.A.)
| | - Pallavi Gupta
- Program in Bioinformatics and Computational Biology, Saint Louis University, St. Louis, MO 63103, USA; (C.G.); (P.G.); (T.-H.A.)
- MU Institute for Data Science and Informatics, University of Missouri, Columbia, MO 65211, USA
| | - Yanhui Peng
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA; (Y.Y.); (Y.P.); (C.P.); (R.J.M.)
- Centers for Disease Control and Prevention, 1600 Clifton Rd., Atlanta, GA 30333, USA
| | - Cristiano Piasecki
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA; (Y.Y.); (Y.P.); (C.P.); (R.J.M.)
- ATSI Brasil Pesquisa e Consultoria, Passo Fundo 99054-328, RS, Brazil
| | - Reginald J. Millwood
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA; (Y.Y.); (Y.P.); (C.P.); (R.J.M.)
| | - Tae-Hyuk Ahn
- Program in Bioinformatics and Computational Biology, Saint Louis University, St. Louis, MO 63103, USA; (C.G.); (P.G.); (T.-H.A.)
- Department of Computer Science, Saint Louis University, St. Louis, MO 63103, USA
| | - C. Neal Stewart
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA; (Y.Y.); (Y.P.); (C.P.); (R.J.M.)
- Center for Agricultural Synthetic Biology, University of Tennessee, Knoxville, TN 37996, USA
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Zhang JJ, Yang H. Metabolism and detoxification of pesticides in plants. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 790:148034. [PMID: 34111793 DOI: 10.1016/j.scitotenv.2021.148034] [Citation(s) in RCA: 59] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 05/20/2021] [Accepted: 05/21/2021] [Indexed: 06/12/2023]
Abstract
Pesticides make indispensable contributions to agricultural productivity. However, the residues after their excessive use may be harmful to crop production, food safety and human health. Although the ability of plants (especially crops) to accumulate and metabolize pesticides has been intensively investigated, data describing the chemical and metabolic processes in plants are limited. Understanding how pesticides are metabolized is a key step toward developing cleaner crops with minimal pesticides in crops, creating new green pesticides (or safeners), and building up the engineered plants for environmental remediation. In this review, we describe the recently discovered mechanistic insights into pesticide metabolic pathways, and development of improved plant genotypes that break down pesticides more effectively. We highlight the identification of biological features and functions of major pesticide-metabolized enzymes such as laccases, glycosyltransferases, methyltransferases and ATP binding cassette (ABC) transporters, and discuss their chemical reactions involved in diverse pathways including the formation of pesticide S-conjugates. The recent findings for some signal molecules (phytohomormes) like salicylic acid, jasmonic acid and brassinosteroids involved in metabolism and detoxification of pesticides are summarized. In particular, the emerging research on the epigenetic mechanisms such DNA methylation and histone modification for pesticide metabolism is emphasized. The review would broaden our understanding of the regulatory networks of the pesticide metabolic pathways in higher plants.
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Affiliation(s)
- Jing Jing Zhang
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing 210095, China; College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Hong Yang
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing 210095, China.
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Cockerton HM, Kaundun SS, Nguyen L, Hutchings SJ, Dale RP, Howell A, Neve P. Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population. FRONTIERS IN PLANT SCIENCE 2021; 12:651381. [PMID: 34267768 PMCID: PMC8276266 DOI: 10.3389/fpls.2021.651381] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Accepted: 06/02/2021] [Indexed: 06/13/2023]
Abstract
The evolution of resistance to pesticides in agricultural systems provides an opportunity to study the fitness costs and benefits of novel adaptive traits. Here, we studied a population of Amaranthus tuberculatus (common waterhemp), which has evolved resistance to glyphosate. The growth and fitness of seed families with contrasting levels of glyphosate resistance was assessed in the absence of glyphosate to determine their ability to compete for resources under intra- and interspecific competition. We identified a positive correlation between the level of glyphosate resistance and gene copy number for the 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) glyphosate target, thus identifying gene amplification as the mechanism of resistance within the population. Resistant A. tuberculatus plants were found to have a lower competitive response when compared to the susceptible phenotypes with 2.76 glyphosate resistant plants being required to have an equal competitive effect as a single susceptible plant. A growth trade-off was associated with the gene amplification mechanism under intra-phenotypic competition where 20 extra gene copies were associated with a 26.5 % reduction in dry biomass. Interestingly, this growth trade-off was mitigated when assessed under interspecific competition from maize.
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Affiliation(s)
- Helen M. Cockerton
- NIAB EMR, Kent, United Kingdom
- Warwick Crop Centre, The University of Warwick Wellesbourne, Warwick, United Kingdom
| | - Shiv S. Kaundun
- Syngenta, Jealott’s Hill International Research Centre, Bracknell, United Kingdom
| | | | - Sarah Jane Hutchings
- Syngenta, Jealott’s Hill International Research Centre, Bracknell, United Kingdom
| | - Richard P. Dale
- Syngenta, Jealott’s Hill International Research Centre, Bracknell, United Kingdom
| | - Anushka Howell
- Syngenta, Jealott’s Hill International Research Centre, Bracknell, United Kingdom
| | - Paul Neve
- Warwick Crop Centre, The University of Warwick Wellesbourne, Warwick, United Kingdom
- Rothamsted Research, Harpenden, United Kingdom
- Department of Plant and Environmental Sciences, University of Copenhagen, Tåstrup, Denmark
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12
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Khalil Y, Ashworth MB, Han H, Qin Y, Rocha RL, Pritchard B, Cameron D, Beckie HJ. Identification of the first glyphosate-resistant capeweed (Arctotheca calendula) population. PEST MANAGEMENT SCIENCE 2021; 77:2568-2575. [PMID: 33481327 DOI: 10.1002/ps.6295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Revised: 01/18/2021] [Accepted: 01/22/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Glyphosate is routinely used in Australia to control the Arctotheca species Arctotheca calendula (L.) Levyns (referred hereinafter as capeweed). This study identifies the first global case of field-evolved glyphosate-resistant capeweed, collected from the grainbelt of Western Australia. RESULTS In 2020, a capeweed biotype that was collected from Borden in the southern Western Australian grainbelt was confirmed to be glyphosate-resistant (referred hereinafter as Spence population). When compared to the pooled mortality of six field-collected, glyphosate susceptible capeweed populations (S1, S2, S3, S4, S5 and S6), the Spence population was found > 11-fold more resistant to glyphosate than the pooled results of the susceptible populations (S1-S6) at the lethal dose of 50% (LD50 ) level. The growth of the Spence population was also less affected, requiring > 13-fold more glyphosate to reduce growth than the pooled susceptible populations at the growth reduction of 50% (GR50 ) level. Sequencing of the plastidic 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene indicated no known single gene mutation imparting glyphosate resistance. This study, however, did not investigate any other known mechanisms that impart glyphosate resistance. When screened at the field-applied rate, this Spence population was also found to survive an inhibitor of acetolactate synthase (ALS) (metosulam) and an inhibitor of phytoene desaturase (diflufenican). CONCLUSIONS This is the first confirmation of glyphosate resistance evolution in a capeweed population globally. With capeweed resistance already confirmed to photosystem-I inhibiting herbicides (paraquat and diquat), this study emphasizes the importance of using integrated measures that do not depend only on the use of non-selective herbicides for controlling herbicide resistance-prone capeweed populations. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Yaseen Khalil
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
| | - Michael B Ashworth
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
| | - Heping Han
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
| | - Yu Qin
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
| | - Roberto L Rocha
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
| | | | - David Cameron
- Farmanco Management Consultants, Moora, WA, Australia
| | - Hugh J Beckie
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
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13
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Pan L, Yu Q, Wang J, Han H, Mao L, Nyporko A, Maguza A, Fan L, Bai L, Powles S. An ABCC-type transporter endowing glyphosate resistance in plants. Proc Natl Acad Sci U S A 2021; 118:e2100136118. [PMID: 33846264 PMCID: PMC8072331 DOI: 10.1073/pnas.2100136118] [Citation(s) in RCA: 63] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
Glyphosate is the most widely used herbicide in world agriculture and for general vegetation control in a wide range of situations. Global and often intensive glyphosate selection of very large weedy plant populations has resulted in widespread glyphosate resistance evolution in populations of many weed species. Here, working with a glyphosate-resistant (GR) Echinochloa colona population that evolved in a Western Australia agricultural field, we identified an ATP-binding cassette (ABC) transporter (EcABCC8) that is consistently up-regulated in GR plants. When expressed in transgenic rice, this EcABCC8 transporter endowed glyphosate resistance. Equally, rice, maize, and soybean overexpressing the EcABCC8 ortholog genes were made resistant to glyphosate. Conversely, CRISPR/Cas9-mediated knockout of the EcABCC8 ortholog gene OsABCC8 increased rice susceptibility to glyphosate. Subcellular localization analysis and quantification of glyphosate cellular levels in treated ABCC8 transgenic rice plants and isolated leaf protoplasts as well as structural modeling support that EcABCC8 is likely a plasma membrane-localized transporter extruding cytoplasmic glyphosate to the apoplast, lowering the cellular glyphosate level. This is a report of a membrane transporter effluxing glyphosate in a GR plant species, and its function is likely conserved in crop plant species.
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Affiliation(s)
- Lang Pan
- Hunan Weed Science Key Laboratory, Hunan Academy of Agricultural Sciences, 410125 Changsha, China
- College of Plant Protection, Hunan Agricultural University, 410128 Changsha, China
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, WA 6009, Australia
| | - Qin Yu
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, WA 6009, Australia;
| | - Junzhi Wang
- Hunan Weed Science Key Laboratory, Hunan Academy of Agricultural Sciences, 410125 Changsha, China
| | - Heping Han
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, WA 6009, Australia
| | - Lingfeng Mao
- Institute of Crop Science, Zhejiang University-Xuan Gu Agricultural Joint Innovation Center, Zhejiang University, 310058 Hangzhou, China
| | - Alex Nyporko
- Department of Molecular Biotechnology and Bioinformatics, Taras Shevchenko National University of Kyiv, 01033 Kiev, Ukraine
| | - Anna Maguza
- Department of Molecular Biotechnology and Bioinformatics, Taras Shevchenko National University of Kyiv, 01033 Kiev, Ukraine
| | - Longjiang Fan
- Institute of Crop Science, Zhejiang University-Xuan Gu Agricultural Joint Innovation Center, Zhejiang University, 310058 Hangzhou, China
| | - Lianyang Bai
- Hunan Weed Science Key Laboratory, Hunan Academy of Agricultural Sciences, 410125 Changsha, China;
- College of Plant Protection, Hunan Agricultural University, 410128 Changsha, China
| | - Stephen Powles
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, WA 6009, Australia;
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Yanniccari M, Vázquez-García JG, Gómez-Lobato ME, Rojano-Delgado AM, Alves PLDCA, De Prado R. First Case of Glyphosate Resistance in Bromus catharticus Vahl.: Examination of Endowing Resistance Mechanisms. FRONTIERS IN PLANT SCIENCE 2021; 12:617945. [PMID: 33679832 PMCID: PMC7930564 DOI: 10.3389/fpls.2021.617945] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 01/26/2021] [Indexed: 06/12/2023]
Abstract
Bromus catharticus Vahl. has been used as a valuable forage crop, but it has also been noted as a weed of winter crops and an invader in several countries. In Argentina, a putative glyphosate-resistant population of B. catharticus was identified as a consequence of the lack of effective control with glyphosate in the pre-sowing of wheat. Plant survival and shikimate accumulation analysis demonstrated a lower glyphosate-sensitivity of this population in comparison to a susceptible B. catharticus population. The resistant population was 4-fold more resistant to glyphosate than its susceptible counterpart. There was no evidence of target-site mechanisms of glyphosate resistance or an enhanced capacity to metabolize glyphosate in the resistant population. However, the resistant plants showed a lower foliar retention of glyphosate (138.34 μl solution g-1 dry weight vs. 390.79 μl solution g-1 dry weight), a reduced absorption of 14C-glyphosate (54.18 vs. 73.56%) and lower translocation of 14C-glyphosate from the labeled leaf (27.70 vs. 62.36%). As a result, susceptible plants accumulated a 4.1-fold higher concentration of 14C-glyphosate in the roots compared to resistant plants. The current work describes the first worldwide case of glyphosate resistance in B. catharticus. A reduced foliar retention of herbicide, a differential rate of glyphosate entry into leaves and an altered glyphosate translocation pattern would be the most likely mechanisms of glyphosate exclusion.
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Affiliation(s)
- Marcos Yanniccari
- National Scientific and Technical Research Council, Buenos Aires, Argentina
- Chacra Experimental Integrada Barrow, MDA-INTA, Tres Arroyos, Argentina
| | - José G. Vázquez-García
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, Cordoba, Spain
| | - María E. Gómez-Lobato
- National Scientific and Technical Research Council, Buenos Aires, Argentina
- Plant Physiology Institute (INFIVE), National University of La Plata, La Plata, Argentina
| | | | - Pedro L. da C. A. Alves
- School of Agricultural and Veterinarian Sciences, Sâo Paulo State University (Unesp), Jaboticabal, Brazil
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, Cordoba, Spain
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15
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Vázquez-García JG, Alcántara-de la Cruz R, Rojano-Delgado AM, Palma-Bautista C, de Portugal Vasconcelos JM, De Prado R. Multiple Herbicide Resistance Evolution: The Case of Eleusine indica in Brazil. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:1197-1205. [PMID: 33470815 DOI: 10.1021/acs.jafc.0c03999] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The occurrence of multiple herbicide resistant weeds has increased considerably in glyphosate-resistant soybean fields in Brazil; however, the mechanisms governing this resistance have not been studied. In its study, the target-site and nontarget-site mechanisms were characterized in an Eleusine indica population (R-15) with multiple resistance to the acetyl-CoA carboxylase (ACCase) inhibitors, glyphosate, imazamox, and paraquat. Absorption and translocation rates of 14C-diclofop-methyl14C-imazamox and 14C-glyphosate of the R-15 population were similar to those of a susceptible (S-15) population; however, the R-15 population translocated ∼38% less 14C-paraquat to the rest of plant and roots than the S-15 population. Furthermore, the R-15 plants metabolized (by P450 cytochrome) 55% and 88% more diclofop-methyl (conjugate) and imazamox (imazamox-OH and conjugate), respectively, than the S-15 plants. In addition, the Pro-106-Ser mutation was found in the EPSPS gene of this population. This report describes the first characterization of the resistance mechanisms in a multiple herbicide resistant weed from Brazil.
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Affiliation(s)
- José G Vázquez-García
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071, Cordoba, Spain
| | | | - Antonia M Rojano-Delgado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071, Cordoba, Spain
| | | | - João M de Portugal Vasconcelos
- Biosciences Department, Polytechnic Institute of Beja, 7800-295 Beja, Portugal
- VALORIZA-Research Centre for Endogenous Resource Valorization, Polytechnic Institute of Portalegre, 7300-555 Portalegre, Portugal
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071, Cordoba, Spain
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16
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Suzukawa AK, Bobadilla LK, Mallory-Smith C, Brunharo CACG. Non-target-Site Resistance in Lolium spp. Globally: A Review. FRONTIERS IN PLANT SCIENCE 2021; 11:609209. [PMID: 33552102 PMCID: PMC7862324 DOI: 10.3389/fpls.2020.609209] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 12/07/2020] [Indexed: 05/10/2023]
Abstract
The Lolium genus encompasses many species that colonize a variety of disturbed and non-disturbed environments. Lolium perenne L. spp. perenne, L. perenne L. spp. multiflorum, and L. rigidum are of particular interest to weed scientists because of their ability to thrive in agricultural and non-agricultural areas. Herbicides are the main tool to control these weeds; however, Lolium spp. populations have evolved multiple- and cross-resistance to at least 14 herbicide mechanisms of action in more than 21 countries, with reports of multiple herbicide resistance to at least seven mechanisms of action in a single population. In this review, we summarize what is currently known about non-target-site resistance in Lolium spp. to acetyl CoA carboxylase, acetohydroxyacid synthase, microtubule assembly, photosystem II, 5-enolpyruvylshikimate-3-phosphate synthase, glutamine synthetase, very-long chain fatty acids, and photosystem I inhibitors. We suggest research topics that need to be addressed, as well as strategies to further our knowledge and uncover the mechanisms of non-target-site resistance in Lolium spp.
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Affiliation(s)
- Andréia K. Suzukawa
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
| | - Lucas K. Bobadilla
- Department of Crop Sciences, University of Illinois, Urbana, IL, United States
| | - Carol Mallory-Smith
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
| | - Caio A. C. G. Brunharo
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
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17
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Adriano RC, Mendes KF, Alcántara-de la Cruz R, do Nascimento JLM, Ferreira LR, Tornisielo VL. Effect of Fertiactyl ® on the absorption and translocation of 14C-glyphosate in young eucalyptus plants. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2021; 56:235-240. [PMID: 33449826 DOI: 10.1080/03601234.2021.1872325] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Fertiactyl® is a foliar fertilizer with the potential to minimize the phytotoxicity effects caused by glyphosate drift in eucalyptus plants. As the interactions of the glyphosate and Fertiactyl® in tank mix on the plant behavior are not yet known, the objective was to evaluate the absorption and translocation of 14C-glyphosate, applied isolated and mixed in tank with Fertiactyl®, in young eucalyptus plants (clone I-144, Eucalyptus urophylla x E. grandis). The addition of Fertiactyl® to the mixture of 14C-glyphosate reduced the absorption by 94.3% in relation to the total absorbed at the end of the evaluation compared to plants treated only with 14C-glyphosate, i.e., Fertiactyl® protected the eucalyptus plants of the glyphosate intoxication by drift. The translocation rates from the treated leaves to the rest of the shoots and roots were low (<2% of the total recovered) in both treatments, suggest that restricted translocation is a mechanism of natural tolerance to glyphosate in plants of clone I-144. It is concluded that Fertiactyl®, mixed in the solution with glyphosate, protects young eucalyptus plants against glyphosate drift by reducing the amount of herbicide absorbed.
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Affiliation(s)
| | | | | | | | - Lino Roberto Ferreira
- Departamento de Agronomia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Valdemar Luiz Tornisielo
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, São Paulo, Brazil
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18
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Baek Y, Bobadilla LK, Giacomini DA, Montgomery JS, Murphy BP, Tranel PJ. Evolution of Glyphosate-Resistant Weeds. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2021; 255:93-128. [PMID: 33932185 DOI: 10.1007/398_2020_55] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Widespread adoption of glyphosate-resistant crops and concomitant reliance on glyphosate for weed control set an unprecedented stage for the evolution of herbicide-resistant weeds. There are now 48 weed species that have evolved glyphosate resistance. Diverse glyphosate-resistance mechanisms have evolved, including single, double, and triple amino acid substitutions in the target-site gene, duplication of the gene encoding the target site, and others that are rare or nonexistent for evolved resistance to other herbicides. This review summarizes these resistance mechanisms, discusses what is known about their evolution, and concludes with some of the impacts glyphosate-resistant weeds have had on weed management.
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Affiliation(s)
- Yousoon Baek
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA
| | - Lucas K Bobadilla
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA
| | - Darci A Giacomini
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA
| | | | - Brent P Murphy
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA
| | - Patrick J Tranel
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA.
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19
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Singh V, Etheredge L, McGinty J, Morgan G, Bagavathiannan M. First case of glyphosate resistance in weedy sunflower (Helianthus annuus). PEST MANAGEMENT SCIENCE 2020; 76:3685-3692. [PMID: 32419329 DOI: 10.1002/ps.5917] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 05/02/2020] [Accepted: 05/18/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Weedy sunflower (Helianthus annuus L.) is a troublesome weed in row-crop production fields in South Texas. Populations with suspected resistance to glyphosate were evaluated with 1X and 4X rates (X = 868 g ae ha-1 ) of the herbicide, followed by a dose-response assay of the most resistant population. Molecular studies were conducted to determine if target-site mechanisms were responsible for resistance in these populations. Additionally, field experiments were conducted at two locations (Somerville and Granger, TX) to evaluate the effectiveness of different tank-mix combinations in controlling naturally infesting glyphosate-resistant (GR) weedy sunflower populations in GR corn. RESULTS In a study conducted in the growth chamber, seven of the 11 tested populations survived up to the 4X rate of glyphosate. The most-resistant population (TX15-11) was 29-fold more resistant to glyphosate, compared to the susceptible standard. In resistant populations, 5-21 more copies of the EPSPS gene were observed compared to the susceptible standard. In the field studies, tank-mix applications of glyphosate + halosulfuron-methyl, glyphosate + prosulfuron, glyphosate + a premix of halosulfuron-methyl and dicamba or glyphosate + a premix of diflufenzopyr and dicamba effectively controlled GR weedy sunflower populations. CONCLUSION Glyphosate-resistance was observed in 81% of the putative resistant weedy sunflower populations tested in this study. Resistance in these populations was conferred primarily by amplification of the EPSPS gene. Effective control of GR weedy sunflower can be achieved by tank-mixes tested in the current study, which provides acceptable levels of crop safety. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Vijay Singh
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, USA
| | | | - Josh McGinty
- AgriLife Research and Extension Center, Texas A&M University, Corpus Christi, TX, USA
| | - Gaylon Morgan
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, USA
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20
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Mendes RR, Takano HK, Leal JF, Souza AS, Morran S, Oliveira RS, Adegas FS, Gaines TA, Dayan FE. Evolution of EPSPS double mutation imparting glyphosate resistance in wild poinsettia (Euphorbia heterophylla L.). PLoS One 2020; 15:e0238818. [PMID: 32913366 PMCID: PMC7482956 DOI: 10.1371/journal.pone.0238818] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Accepted: 08/23/2020] [Indexed: 12/29/2022] Open
Abstract
The evolution of glyphosate resistance (GR) in weeds is an increasing problem. Glyphosate has been used intensively on wild poinsettia (Euphorbia heterophylla L.) populations for at least 20 years in GR crops within South America. We investigated the GR mechanisms in a wild poinsettia population from a soybean field in southern Brazil. The GR population required higher glyphosate doses to achieve 50% control (LD50) and 50% dry mass reduction (MR50) compared to a glyphosate susceptible (GS) population. The ratio between the LD50 and MR50 of GR and GS resulted in resistance factors (RF) of 6.9-fold and 6.1-fold, respectively. Shikimate accumulated 6.7 times more in GS than in GR when leaf-discs were incubated with increasing glyphosate concentrations. No differences were found between GR and GS regarding non-target-site mechanisms. Neither population metabolized glyphosate to significant levels following treatment with 850 g ha-1 glyphosate. Similar levels of 14C-glyphosate uptake and translocation were observed between the two populations. No differences in EPSPS expression were found between GS and GR. Two target site mutations were found in all EPSPS alleles of homozygous resistant plants: Thr102Ile + Pro106Thr (TIPT-mutation). Heterozygous individuals harbored both alleles, wild-type and TIPT. Half of GR individuals were heterozygous, suggesting that resistance is still evolving in the population. A genotyping assay was developed based on the Pro106Thr mutation, demonstrating high efficiency to identify homozygous, heterozygous or wild-type EPSPS sequences across different plants. This is the first report of glyphosate-resistant wild-poinsettia harboring an EPSPS double mutation (TIPT) in the same plant.
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Affiliation(s)
- Rafael R. Mendes
- Agronomy Department, State University of Maringá, Maringá, PR, Brazil
| | - Hudson K. Takano
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States of America
| | - Jéssica F. Leal
- Rural Federal University of Rio de Janeiro, Seropédica, RJ, Brazil
| | - Amanda S. Souza
- Rural Federal University of Rio de Janeiro, Seropédica, RJ, Brazil
| | - Sarah Morran
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States of America
| | - Rubem S. Oliveira
- Agronomy Department, State University of Maringá, Maringá, PR, Brazil
| | | | - Todd A. Gaines
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States of America
| | - Franck E. Dayan
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States of America
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21
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Meftaul IM, Venkateswarlu K, Dharmarajan R, Annamalai P, Asaduzzaman M, Parven A, Megharaj M. Controversies over human health and ecological impacts of glyphosate: Is it to be banned in modern agriculture? ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 263:114372. [PMID: 32203845 DOI: 10.1016/j.envpol.2020.114372] [Citation(s) in RCA: 95] [Impact Index Per Article: 23.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2019] [Revised: 02/09/2020] [Accepted: 03/12/2020] [Indexed: 05/27/2023]
Abstract
Glyphosate, introduced by Monsanto Company under the commercial name Roundup in 1974, became the extensively used herbicide worldwide in the last few decades. Glyphosate has excellent properties of fast sorption in soil, biodegradation and less toxicity to nontarget organisms. However, glyphosate has been reported to increase the risk of cancer, endocrine-disruption, celiac disease, autism, effect on erythrocytes, leaky-gut syndrome, etc. The reclassification of glyphosate in 2015 as 'probably carcinogenic' under Group 2A by the International Agency for Research on Cancer has been broadly circulated by anti-chemical and environmental advocacy groups claiming for restricted use or ban of glyphosate. In contrast, some comprehensive epidemiological studies involving farmers with long-time exposure to glyphosate in USA and elsewhere coupled with available toxicological data showed no correlation with any kind of carcinogenic or genotoxic threat to humans. Moreover, several investigations confirmed that the surfactant, polyethoxylated tallow amine (POEA), contained in the formulations of glyphosate like Roundup, is responsible for the established adverse impacts on human and ecological health. Subsequent to the evolution of genetically modified glyphosate-resistant crops and the extensive use of glyphosate over the last 45 years, about 38 weed species developed resistance to this herbicide. Consequently, its use in the recent years has been either restricted or banned in 20 countries. This critical review on glyphosate provides an overview of its behaviour, fate, detrimental impacts on ecological and human health, and the development of resistance in weeds and pathogens. Thus, the ultimate objective is to help the authorities and agencies concerned in resolving the existing controversies and in providing the necessary regulations for safer use of the herbicide. In our opinion, glyphosate can be judiciously used in agriculture with the inclusion of safer surfactants in commercial formulations sine POEA, which is toxic by itself is likely to increase the toxicity of glyphosate.
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Affiliation(s)
- Islam Md Meftaul
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, Callaghan, NSW 2308, Australia; Department of Agricultural Chemistry, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
| | - Kadiyala Venkateswarlu
- Formerly Department of Microbiology, Sri Krishnadevaraya University, Anantapuramu 515003, India
| | - Rajarathnam Dharmarajan
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Prasath Annamalai
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Md Asaduzzaman
- NSW Department of Primary Industries, Pine Gully Road, Wagga Wagga, NSW 2650, Australia
| | - Aney Parven
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, Callaghan, NSW 2308, Australia; Department of Agricultural Chemistry, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
| | - Mallavarapu Megharaj
- Global Centre for Environmental Remediation (GCER), Faculty of Science, The University of Newcastle, Callaghan, NSW 2308, Australia; Cooperative Research Centre for Contamination Assessment and Remediation of the Environment (CRC CARE), The University of Newcastle, Callaghan, NSW 2308, Australia.
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22
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New Case of False-Star-Grass (Chloris distichophylla) Population Evolving Glyphosate Resistance. AGRONOMY-BASEL 2020. [DOI: 10.3390/agronomy10030377] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Chloris distichophylla, suspected of glyphosate resistance (GR), was collected from areas of soybean cultivation in Rio Grande do Sul, Brazil. A comparison was made with a susceptible population (GS) to evaluate the resistance level, mechanisms involved, and control alternatives. Glyphosate doses required to reduce the dry weight (GR50) or cause a mortality rate of 50% (LD50) were around 5.1–3 times greater in the GR population than in the GS population. The shikimic acid accumulation was around 6.2-fold greater in GS plants than in GR plants. No metabolized glyphosate was found in either GR or GS plants. Both populations did not differ in the enzyme 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) basal activity or in vitro inhibition of EPSPS activity by glyphosate (I50). The maximum glyphosate absorption was observed at 96 hours after treatment (HAT), which was twofold higher in the GS plants than in the GR plants. This confirms the first case of glyphosate resistance in C. distichophylla. In addition, at 96 HAT, the GS plants translocated more 14C-glyphosate than the GR ones. The best options for the chemical control of both C. distichophylla populations were clethodim, quizalofop, paraquat, glufosinate, tembotrione, diuron, and atrazine. The first case of glyphosate resistance in C. distichophylla was due to impaired uptake and translocation. Chemical control using multiple herbicides with different modes of action (MOA) could be a tool used for integrated weed management (IWM) programs.
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Deng W, Yang Q, Chen Y, Yang M, Xia Z, Zhu J, Chen Y, Cai J, Yuan S. Cyhalofop-butyl and Glyphosate Multiple-Herbicide Resistance Evolved in an Eleusine indica Population Collected in Chinese Direct-Seeding Rice. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:2623-2630. [PMID: 32058714 DOI: 10.1021/acs.jafc.9b07342] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Eleusine indica is a typical xerophytic weed species with a cosmopolitan distribution. It is invasive and highly adaptable to diverse habitats and crops. Due to rice cropping-pattern changes, E indica has become one of the main dominant grass weeds infecting direct-seeding paddy fields. A Chinese E. indica population has evolved multiple-herbicide resistance to cyhalofop-butyl and glyphosate. In this study, the multiple-resistance profile of E. indica to these two different types of herbicides and their resistance mechanisms were investigated. Whole-plant dose-response assays indicated that the multiple-herbicide-resistant (MHR) population exhibited 10.8-fold resistance to cyhalofop-butyl and 3.1-fold resistance to glyphosate compared with the susceptible (S) population. ACCase sequencing revealed that the Asp-2078-Gly mutation was strongly associated with E. indica resistance to cyhalofop-butyl. The MHR plants accumulated less shikimic acid than S plants at 4, 6, and 8 days after glyphosate treatment. In addition, no amino acid substitution in the EPSPS gene was found in MHR plants. Further analysis revealed that the relative expression level of EPSPS in MHR plants was 6-10-fold higher than that in S plants following glyphosate treatment, indicating that EPSPS overexpression may contribute to the glyphosate resistance. Furthermore, the effectiveness of nine post-emergence herbicides against E. indica were evaluated, and one PPO inhibitor pyraclonil was identified as highly effective in controlling the S and MHR E. indica populations.
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Affiliation(s)
- Wei Deng
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Qian Yang
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Yongrui Chen
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Mengting Yang
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Zhiming Xia
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Jin Zhu
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Yueyang Chen
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Jingxuan Cai
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
| | - Shuzhong Yuan
- College of Horticulture and Plant Protection, Yangzhou University, No. 88 of Da Xue Nan Road, Hanjiang District, Yangzhou 225009, China
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24
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Perotti VE, Larran AS, Palmieri VE, Martinatto AK, Permingeat HR. Herbicide resistant weeds: A call to integrate conventional agricultural practices, molecular biology knowledge and new technologies. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 290:110255. [PMID: 31779903 DOI: 10.1016/j.plantsci.2019.110255] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Revised: 09/02/2019] [Accepted: 09/03/2019] [Indexed: 05/16/2023]
Abstract
Herbicide resistant (HR) weeds are of major concern in modern agriculture. This situation is exacerbated by the massive adoption of herbicide-based technologies along with the overuse of a few active ingredients to control weeds over vast areas year after year. Also, many other anthropological, biological, and environmental factors have defined a higher rate of herbicide resistance evolution in numerous weed species around the world. This review focuses on two central points: 1) how these factors have affected the resistance evolution process; and 2) which cultural practices and new approaches would help to achieve an effective integrated weed management. We claim that global climate change is an unnoticed factor that may be acting on the selection of HR weeds, especially those evolving into non-target-site resistance mechanisms. And we present several new tools -such as Gene Drive and RNAi technologies- that may be adopted to cope with herbicide resistance spread, as well as discuss their potential application at field level. This is the first review that integrates agronomic and molecular knowledge of herbicide resistance. It covers not only the genetic basis of the most relevant resistance mechanisms but also the strengths and weaknesses of traditional and forthcoming agricultural practices.
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Affiliation(s)
- Valeria E Perotti
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Alvaro S Larran
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Valeria E Palmieri
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Andrea K Martinatto
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Hugo R Permingeat
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina.
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25
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Takano HK, Fernandes VN, Adegas FS, Oliveira RS, Westra P, Gaines TA, Dayan FE. A novel TIPT double mutation in EPSPS conferring glyphosate resistance in tetraploid Bidens subalternans. PEST MANAGEMENT SCIENCE 2020; 76:95-102. [PMID: 31251461 DOI: 10.1002/ps.5535] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Revised: 06/19/2019] [Accepted: 06/24/2019] [Indexed: 05/27/2023]
Abstract
BACKGROUND Bidens subalternans (greater beggarticks) is a tetraploid and troublesome weed infesting annual crops in most tropical regions of the world. A glyphosate-resistant (GR) B. subalternans biotype was detected in a soybean field from Paraguay. A series of physiological and molecular analyses were conducted to elucidate its resistance mechanisms. RESULTS The GR biotype had a high level of resistance (> 15-fold LD50 ), relative to a glyphosate-susceptible (GS) biotype. Shikimate accumulation was up to ten-fold greater for GS compared with GR. We found no differences in sensitivity when plants were treated and kept under lower (10/4 °C) or higher temperatures (25/20 °C). GS and GR had the same relative EPSPS gene copy number, and similar glyphosate absorption and translocation rates. Neither biotype metabolized glyphosate. A double amino acid substitution (TIPT - Thr102Ile and Pro106Thr) was found in only one EPSPS allele from one of the two EPSPS homoeologs present in tetraploid GR B. subalternans. CONCLUSION This is the first report of a TIPT double mutation conferring high levels of glyphosate resistance in a weed species. The presence of both wild-type and TIPT mutant EPSPS on the polyploid genome of GR B. subalternans may offset a potential fitness cost, requiring additional research to confirm the absence of deleterious effects. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Hudson K Takano
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | - Vanessa Na Fernandes
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | | | - Rubem S Oliveira
- Agronomy Department, State University of Maringá, Maringá, Paraná, Brazil
| | - Philip Westra
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | - Todd A Gaines
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | - Franck E Dayan
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
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26
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Dücker R, Zöllner P, Lümmen P, Ries S, Collavo A, Beffa R. Glutathione transferase plays a major role in flufenacet resistance of ryegrass (Lolium spp.) field populations. PEST MANAGEMENT SCIENCE 2019; 75:3084-3092. [PMID: 30920141 DOI: 10.1002/ps.5425] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 03/23/2019] [Accepted: 03/23/2019] [Indexed: 05/11/2023]
Abstract
BACKGROUND Herbicides inhibiting the synthesis of very long-chain fatty acids (HRAC group K3 , WSSA group 15), such as flufenacet, play an important role in weed management strategies, particularly when herbicide resistance to inhibitors with other modes of action, such as acetolactate synthase or acetyl coenzyme A carboxylase (ACCase), has already evolved. So far, only a few cases of resistance towards inhibitors of the synthesis of very long-chain fatty acids have been described. In this study, we characterized the level of flufenacet resistance in several Lolium spp. field populations and investigated the resistance mechanism. RESULTS The screening for flufenacet resistance revealed the ability of Lolium spp. populations from several continents to survive flufenacet treatments at and above the field rate. This study demonstrates the way in which flufenacet is detoxified in resistant weed populations. Glutathione was found to be conjugated to flufenacet in Lolium spp. seedlings, and there was evidence that glutathione transferase activity was enhanced in protein extracts from flufenacet-resistant seedlings. A significant correlation was found between the resistance factor obtained by biotests and the degradation half-time of flufenacet in ryegrass plants obtained by high-performance liquid chromatography (HPLC). CONCLUSION At present, flufenacet resistance is not widespread; however, in certain Lolium spp. populations resistance levels could reach agronomic relevance due to detoxification by glutathione transferases. In Europe especially, only a few herbicide modes of action are registered for the control of Lolium spp. and therefore it is becoming increasingly important to apply best management practices to prevent the spread of flufenacet resistance. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Rebecka Dücker
- Department of Crop Sciences, Division of General Plant Pathology and Crop Protection, Georg-August Universität Göttingen, Göttingen, Germany
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
| | - Peter Zöllner
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
| | - Peter Lümmen
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
| | - Susanne Ries
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
| | - Alberto Collavo
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
| | - Roland Beffa
- Bayer AG, Crop Science Division, Industrial Park Höchst, Frankfurt/Main, Germany
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27
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Non-Target-Site Resistance to Herbicides: Recent Developments. PLANTS 2019; 8:plants8100417. [PMID: 31618956 PMCID: PMC6843234 DOI: 10.3390/plants8100417] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 10/10/2019] [Accepted: 10/12/2019] [Indexed: 01/07/2023]
Abstract
Non-target-site resistance (NTSR) to herbicides in weeds can be conferred as a result of the alteration of one or more physiological processes, including herbicide absorption, translocation, sequestration, and metabolism. The mechanisms of NTSR are generally more complex to decipher than target-site resistance (TSR) and can impart cross-resistance to herbicides with different modes of action. Metabolism-based NTSR has been reported in many agriculturally important weeds, although reduced translocation and sequestration of herbicides has also been found in some weeds. This review focuses on summarizing the recent advances in our understanding of the physiological, biochemical, and molecular basis of NTSR mechanisms found in weed species. Further, the importance of examining the co-existence of TSR and NTSR for the same herbicide in the same weed species and influence of environmental conditions in the altering and selection of NTSR is also discussed. Knowledge of the prevalence of NTSR mechanisms and co-existing TSR and NTSR in weeds is crucial for designing sustainable weed management strategies to discourage the further evolution and selection of herbicide resistance in weeds.
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28
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Palma-Bautista C, Alcántara-de la Cruz R, Rojano-Delgado AM, Dellaferrera I, Domínguez-Martínez PA, De Prado R. Low temperatures enhance the absorption and translocation of 14C-glyphosate in glyphosate-resistant Conyza sumatrensis. JOURNAL OF PLANT PHYSIOLOGY 2019; 240:153009. [PMID: 31330417 DOI: 10.1016/j.jplph.2019.153009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 06/27/2019] [Accepted: 06/28/2019] [Indexed: 06/10/2023]
Abstract
Influence of low temperatures on the glyphosate efficacy was studied in glyphosate-resistant (R) and -susceptible (S) Conyza sumatrensis biotypes. For this purpose, the physiological and enzymatic aspects involved were characterized under two growing temperature regimes [high (30/20 °C) and low 15/5 °C temperatures day/night]. The R biotype was 5.5 times more resistant than the S biotype at high temperatures; however, this R-to-S ratio decreased to 1.6 at low temperatures. At 96 h after treatment (HAT), the shikimic acid accumulation was higher in the S biotype in both temperature regimes (4.6 and 1.9 more shikimic acid at high and low temperatures, respectively), but the accumulation of the R biotype increased 2.6 times at low temperatures compared to high ones. From 24 to 96 HAT, the 14C-glyphosate absorption ranged from 28 to 65% (percentage reached from 48 HAT) at low temperatures, and from 20 to 50% at high temperatures (gradual increase), but there were no differences between C. sumatrensis biotypes within each temperature regime. At high temperatures, the 14C-glyphosate translocation was different between biotypes, where the R one retained at least 10% more herbicide in the treated leaves than the S biotype at 96 HAT. So, the S biotype translocated 40% of 14C-glyphosate absorbed to roots, and the R biotype translocated only 28% of herbicide at the same period. At low temperatures, there were no differences between biotypes, and at 96 HAT, the 14C-glyphosate found in treated leaves was ˜47% and up to ˜42% reached the roots, i.e., the resistance mechanism was suppressed. The basal and enzymatic activities of the 5-enolpyruvyishikimate 3-phosphate synthase were different between temperature regimes, but there was no differences between biotypes within each temperature regime, showing that target-site resistance mechanisms did not contribute in the glyphosate resistance of the R biotype. Low temperatures enhanced the absorption and translocation of glyphosate by suppressing the resistance mechanisms improving its efficacy on resistant plants. This is the first characterization about the role of temperatures in the glyphosate efficacy on C. sumatrensis.
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Affiliation(s)
| | | | - Antonia M Rojano-Delgado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain
| | - Ignacio Dellaferrera
- Facultad de Ciencias Agrarias, Universidad Nacional del Litoral, 3080 Esperanza, Argentina
| | - Pablo Alfredo Domínguez-Martínez
- National Institute of Forestry, Agriculture and Livestock Research (INIFAP)-Valle del Guadiana Experimental Field, 34170 Durango, Mexico
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain
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29
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Takano HK, Patterson EL, Nissen SJ, Dayan FE, Gaines TA. Predicting herbicide movement across semi-permeable membranes using three phase partitioning. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2019; 159:22-26. [PMID: 31400780 DOI: 10.1016/j.pestbp.2019.05.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 05/09/2019] [Accepted: 05/16/2019] [Indexed: 05/11/2023]
Abstract
Herbicide efficacy depends on herbicides crossing cell and organelle membranes. We evaluated an artificial membrane system to understand how herbicides cross biological membranes. This understanding aids in predicting herbicide behavior in planta and, consequently, efficacy, mode of action, and whether active transporter-based herbicide resistance mechanisms may be possible. Five herbicides with different log Kow and pKa values were assessed: glyphosate, 2,4-D, clopyralid, sulfentrazone and glufosinate. The artificial membrane apparatus included four semipermeable membranes containing buffers with pH 2.7, 5 and/or 7.4, floating in a bath of diethyl ether. These conditions were based on the pH from different cellular compartments and the pKa for these herbicides. Changes in herbicide concentration due to movement were measured using radioactivity or liquid chromatography mass spectrometry. In general, herbicide behavior followed the pattern predicted by their calculated pKa and log Kow. Herbicides added to an acidic phase (pH 2.7) were more mobile than when they were added to the more basic phase (pH 7.4), except when herbicide's pKa was lower than the pH of the starting phase. Clopyralid, 2,4-D, and sulfentrazone showed significant acid trapping behavior due to their weak acid functional groups. Sulfentrazone and 2,4-D had a high affinity for the nonpolar, diethyl ether bath, especially when they were protonated at low pH. Our findings illustrate the robustness of the system to provide predictions about herbicide behavior at the subcellular level.
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Affiliation(s)
- Hudson K Takano
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO 80523, USA.
| | - Eric L Patterson
- Department of Plant and Environmental Sciences, Clemson University, 171 Poole Agricultural Center, Clemson, SC 29634, USA.
| | - Scott J Nissen
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO 80523, USA.
| | - Franck E Dayan
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO 80523, USA.
| | - Todd A Gaines
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO 80523, USA.
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Gaines TA, Patterson EL, Neve P. Molecular mechanisms of adaptive evolution revealed by global selection for glyphosate resistance. THE NEW PHYTOLOGIST 2019; 223:1770-1775. [PMID: 31002387 DOI: 10.1111/nph.15858] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Accepted: 04/09/2019] [Indexed: 06/09/2023]
Abstract
The human-directed, global selection for glyphosate resistance in weeds has revealed a fascinating diversity of evolved resistance mechanisms, including herbicide sequestration in the vacuole, a rapid cell death response, nucleotide polymorphisms in the herbicide target (5-enolpyruvylshikimate-3-phosphate synthase, EPSPS) and increased gene copy number of EPSPS. For this latter mechanism, two distinct molecular genetic mechanisms have been observed, a tandem duplication mechanism and a large extrachromosomal circular DNA (eccDNA) that is tethered to the chromosomes and passed to gametes at meiosis. These divergent mechanisms have a range of consequences for the spread, fitness, and inheritance of resistance traits, and, particularly in the case of the eccDNA, demonstrate how evolved herbicide resistance can generate new insights into plant adaptation to contemporary environmental stress.
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Affiliation(s)
- Todd A Gaines
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO, 80523, USA
| | - Eric L Patterson
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, 1177 Campus Delivery, Fort Collins, CO, 80523, USA
- Department of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA
| | - Paul Neve
- Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, UK
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31
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Huang Z, Liu Y, Zhang C, Jiang C, Huang H, Wei S. Molecular basis of natural tolerance to glyphosate in Convolvulus arvensis. Sci Rep 2019; 9:8133. [PMID: 31148556 PMCID: PMC6544634 DOI: 10.1038/s41598-019-44583-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Accepted: 05/20/2019] [Indexed: 11/21/2022] Open
Abstract
Convolvulus arvensis is a troublesome weed that is naturally tolerant to glyphosate. This weed tolerates glyphosate at a rate 5.1 times higher than that of glyphosate-susceptible Calystegia hederacea. Glyphosate-treated C. arvensis plants accumulated less shikimic acid than C. hederacea plants. The overexpression of EPSPS genes from the two species in transgenic Arabidopsis thaliana resulted in similar glyphosate tolerance levels. qPCR of genomic DNA revealed that the EPSPS copy number in C. arvensis was approximately 2 times higher than that in C. hederacea. Moreover, glyphosate treatment caused a marked increase in EPSPS mRNA in C. arvensis compared to C. hederacea. GUS activity analysis showed that the promoter of CaEPSPS (CaEPSPS-P) highly improved GUS expression after glyphosate treatment, while no obvious differential GUS expression was observed in ChEPSPS-P transgenic A. thaliana in the presence or absence of glyphosate. Based on the obtained results, two coexisting mechanisms may explain the natural glyphosate tolerance in C. arvensis: (i) high EPSPS copy number and (ii) specific promoter-mediated overexpression of EPSPS after glyphosate treatment.
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Affiliation(s)
- Zhaofeng Huang
- Key Laboratory of Weed Science, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China
| | - Yan Liu
- Institute of Environment and Plant Protection, Chinese Academy of Tropical Agricultural Sciences, Haikou, 570100, China
| | - Chaoxian Zhang
- Key Laboratory of Weed Science, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China
| | - Cuilan Jiang
- Key Laboratory of Weed Science, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China
| | - Hongjuan Huang
- Key Laboratory of Weed Science, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China.
| | - Shouhui Wei
- Key Laboratory of Weed Science, Institute of Plant Protection (IPP), Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China.
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32
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García MJ, Palma-Bautista C, Rojano-Delgado AM, Bracamonte E, Portugal J, Alcántara-de la Cruz R, De Prado R. The Triple Amino Acid Substitution TAP-IVS in the EPSPS Gene Confers High Glyphosate Resistance to the Superweed Amaranthus hybridus. Int J Mol Sci 2019; 20:E2396. [PMID: 31096560 PMCID: PMC6567628 DOI: 10.3390/ijms20102396] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2019] [Revised: 05/08/2019] [Accepted: 05/09/2019] [Indexed: 01/10/2023] Open
Abstract
The introduction of glyphosate-resistant (GR) crops revolutionized weed management; however, the improper use of this technology has selected for a wide range of weeds resistant to glyphosate, referred to as superweeds. We characterized the high glyphosate resistance level of an Amaranthus hybridus population (GRH)-a superweed collected in a GR-soybean field from Cordoba, Argentina-as well as the resistance mechanisms that govern it in comparison to a susceptible population (GSH). The GRH population was 100.6 times more resistant than the GSH population. Reduced absorption and metabolism of glyphosate, as well as gene duplication of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) or its overexpression did not contribute to this resistance. However, GSH plants translocated at least 10% more 14C-glyphosate to the rest of the plant and roots than GRH plants at 9 h after treatment. In addition, a novel triple amino acid substitution from TAP (wild type, GSH) to IVS (triple mutant, GRH) was identified in the EPSPS gene of the GRH. The nucleotide substitutions consisted of ATA102, GTC103 and TCA106 instead of ACA102, GCG103, and CCA106, respectively. The hydrogen bond distances between Gly-101 and Arg-105 positions increased from 2.89 Å (wild type) to 2.93 Å (triple-mutant) according to the EPSPS structural modeling. These results support that the high level of glyphosate resistance of the GRH A. hybridus population was mainly governed by the triple mutation TAP-IVS found of the EPSPS target site, but the impaired translocation of herbicide also contributed in this resistance.
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Affiliation(s)
- Maria J García
- Department of Botany, Ecology and Plant Physiology, University of Cordoba, 14071 Córdoba, Spain.
| | | | - Antonia M Rojano-Delgado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain.
| | - Enzo Bracamonte
- Faculty of Agricultural Sciences, National University of Cordoba (UNC), 5001 Cordoba, Argentina.
| | - João Portugal
- Department of Biosciences, Research Center for Endogenous Resource Valorization's, Polytechnic Institute of Beja, 7800-295 Beja, Portugal.
| | | | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain.
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Palma-Bautista C, Gherekhloo J, Domínguez-Martínez PA, Domínguez-Valenzuela JA, Cruz-Hipolito HE, Alcántara-de la Cruz R, Rojano-Delgado AM, De Prado R. Characterization of three glyphosate resistant Parthenium hysterophorus populations collected in citrus groves from Mexico. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2019; 155:1-7. [PMID: 30857618 DOI: 10.1016/j.pestbp.2018.11.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Revised: 11/01/2018] [Accepted: 11/02/2018] [Indexed: 06/09/2023]
Abstract
Continuous use of glyphosate in citrus groves in the Gulf of Mexico region has selected for resistant Parthenium hysterophorus L. populations. In this study, the target-site and non-target-site resistance mechanisms were characterized in three putative glyphosate-resistant (GR) P. hysterophorus populations, collected in citrus groves from Acateno, Puebla (GR1 and GR2) and Martínez de la Torre, Veracruz (GR3), and compared with a susceptible population (GS). Based on plant mortality, the GR populations were 9.2-17.3 times more resistant to glyphosate than the GS population. The low shikimate accumulation in the GR population confirmed this resistance. Based on plant mortality and shikimate accumulation, the GR3 population showed intermediate resistance to glyphosate. The GR populations absorbed 15-28% less 14C-glyphosate than the GS population (78.7% absorbed from the applied) and retained 48.7-70.7% of 14C-glyphosate in the treated leaf, while the GS population translocated ~68% of absorbed herbicide to shoots and roots. The GR3 population showed the lowest translocation and absorption rates, but was found to be susceptible at the target site level. The 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene sequence of the GR1 and GR2 populations showed the Pro106-Ser mutation, conferring 19- and 25-times more resistance in comparison to the GS population, respectively. Reduced absorption and impaired translocation conferred glyphosate resistance on the GR3 population, and contributed partially to the resistance of the GR1 and GR2 populations. Additionally, the Pro-106-Ser mutation increased the glyphosate resistance of the last two P. hysterophorus populations.
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Affiliation(s)
| | - Javid Gherekhloo
- Department of Agronomy, Gorgan University of Agricultural Sciences and Natural Resources, 49189-43464 Gorgan, Iran.
| | - Pablo Alfredo Domínguez-Martínez
- National Institute of Forestry, Agriculture and Livestock Research (INIFAP)-Valle del Guadiana Experimental Field, 34170 Durango, Mexico
| | | | | | | | - Antonia M Rojano-Delgado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain
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Palma-Bautista C, Torra J, Garcia MJ, Bracamonte E, Rojano-Delgado AM, Alcántara-de la Cruz R, De Prado R. Reduced Absorption and Impaired Translocation Endows Glyphosate Resistance in Amaranthus palmeri Harvested in Glyphosate-Resistant Soybean from Argentina. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:1052-1060. [PMID: 30624921 DOI: 10.1021/acs.jafc.8b06105] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Amaranthus palmeri S. Watson is probably the worst glyphosate-resistant (GR) weed worldwide. The EPSPS (5-enolpyruvylshikimate-3-phosphate-synthase) gene amplification has been reported as the major target-site-resistance (TSR) mechanism conferring resistance to glyphosate in this species. In this study, TSR and non-target-site-resistance (NTSR) mechanisms to glyphosate were characterized in a putative resistant A. palmeri population (GRP), harvested in a GR soybean crop from Argentina. Glyphosate resistance was confirmed for the GRP population by dose-response assays. No evidence of TSR mechanisms, as well as glyphosate metabolism, was found in this population. Moreover, a susceptible population (GSP) that absorbed about 10% more herbicide than the GRP population was evaluated at different periods after treatment. The GSP population translocated about 20% more glyphosate to the remainder of the shoots and roots at 96 h after treatment than the control, while the GRP population retained 62% of herbicide in the treated leaves. This is the first case of glyphosate resistance in A. palmeri involving exclusively NTSR mechanisms.
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Affiliation(s)
| | - Joel Torra
- Department d'Hortofructicultura, Botànica i Jardineria, Agrotecnio , Universitat de Lleida , 25198 , Lleida , Spain
| | | | - Enzo Bracamonte
- Faculty of Agricultural Sciences , National University of Cordoba (UNC) , 5001 Cordoba , Argentina
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Morran S, Moretti ML, Brunharo CA, Fischer AJ, Hanson BD. Multiple target site resistance to glyphosate in junglerice (Echinochloa colona) lines from California orchards. PEST MANAGEMENT SCIENCE 2018; 74:2747-2753. [PMID: 29722118 DOI: 10.1002/ps.5061] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Revised: 04/16/2018] [Accepted: 04/29/2018] [Indexed: 05/12/2023]
Abstract
BACKGROUND In California specialty cropping systems such as vineyards and orchards, Echinochloa colona is present as a summer annual weed. It is able to germinate throughout the growing season whenever favorable conditions are present, and management relies heavily on glyphosate applications. Glyphosate-resistant (GR) E. colona biotypes are present in the state, but the levels of resistance observed suggest that there may be differences in mechanisms of resistance among populations. RESULTS Echinochloa colona lines collected from different regions of California's Central Valley presented resistance levels ranging from 1.4 to 4.3-fold compared to susceptible lines. No differences in the absorption and translocation of [14 C]-glyphosate were observed among lines. Resistant lines accumulated eight-fold less shikimic acid after treatment with 435 and 870 g a.e. ha-1 glyphosate compared to the most susceptible line. Sequencing of a region of the EPSPS gene revealed three single nucleotide changes leading to amino acid substitutions at Proline 106, including Pro106Leu, Pro106Thr and Pro106Ser. CONCLUSION These results indicate that an altered target site in EPSPS is contributing to resistance in these lines and resistance has evolved independently, multiple times in the Central Valley of California. Additional research is needed to further understand the genomic contributions of resistance loci in this polyploid weed species. © 2018 Society of Chemical Industry.
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Affiliation(s)
- Sarah Morran
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Marcelo L Moretti
- Department of Horticulture, Oregon State University, Corvallis, OR, USA
| | - Caio A Brunharo
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Albert J Fischer
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Bradley D Hanson
- Department of Plant Sciences, University of California, Davis, CA, USA
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d'Avignon DA, Ge X. In vivo NMR investigations of glyphosate influences on plant metabolism. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 292:59-72. [PMID: 29705038 DOI: 10.1016/j.jmr.2018.03.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Revised: 03/13/2018] [Accepted: 03/15/2018] [Indexed: 06/08/2023]
Abstract
Glyphosate is the world's most widely used herbicide; popular due to its relative low cost, low toxicity, and high efficacy in controlling most common weed species. Genetic engineering of crop seeds to be glyphosate-tolerant has facilitated the modern global agricultural practice whereby both weeds and crops are treated with herbicide, while only the crops survive. However, due to extreme selective pressure, glyphosate-resistant (GR) weed species are now found with increasing frequency in nature, threatening the dominant weed management system used in large-scale agriculture across much of the globe. In vivo NMR studies of plants have facilitated the discovery and understanding of the glyphosate-resistance mechanism of the multi-continent, highly invasive weed species, GR horseweed Conyza canadensis (L.) Cronq. and GR ryegrass (Lolium spp.). This study exemplifies how in vivo NMR spectroscopy can be used to better understandherbicide-associated metabolic alterations observed in living plants, which poses a significant threat to modern agriculture as it is currently practiced.
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Affiliation(s)
- D André d'Avignon
- Division of Molecular Medicine, University of Minnesota, 420 Delaware St SE, Minneapolis, MN 55455, United States.
| | - Xia Ge
- Biomedical Magnetic Resonance Laboratory, Washington University, CB 8227, 4525 Scott Ave., St. Louis, MO 63110, United States
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Heap I, Duke SO. Overview of glyphosate-resistant weeds worldwide. PEST MANAGEMENT SCIENCE 2018; 74:1040-1049. [PMID: 29024306 DOI: 10.1002/ps.4760] [Citation(s) in RCA: 168] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2017] [Revised: 10/05/2017] [Accepted: 10/05/2017] [Indexed: 05/06/2023]
Abstract
Glyphosate is the most widely used and successful herbicide discovered to date, but its utility is now threatened by the occurrence of several glyphosate-resistant weed species. Glyphosate resistance first appeared in Lolium rigidum in an apple orchard in Australia in 1996, ironically the year that the first glyphosate-resistant crop (soybean) was introduced in the USA. Thirty-eight weed species have now evolved resistance to glyphosate, distributed across 37 countries and in 34 different crops and six non-crop situations. Although glyphosate-resistant weeds have been identified in orchards, vineyards, plantations, cereals, fallow and non-crop situations, it is the glyphosate-resistant weeds in glyphosate-resistant crop systems that dominate the area infested and growing economic impact. Glyphosate-resistant weeds present the greatest threat to sustained weed control in major agronomic crops because this herbicide is used to control weeds with resistance to herbicides with other sites of action, and no new herbicide sites of action have been introduced for over 30 years. Industry has responded by developing herbicide resistance traits in major crops that allow existing herbicides to be used in a new way. However, over reliance on these traits will result in multiple-resistance in weeds. Weed control in major crops is at a precarious point, where we must maintain the utility of the herbicides we have until we can transition to new weed management technologies. © 2017 Society of Chemical Industry.
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Affiliation(s)
- Ian Heap
- International Survey of Herbicide-Resistant Weeds, Corvallis, OR, USA
| | - Stephen O Duke
- USDA, ARS, Natural Products Utilization Research Unit, National Center for Natural Products Research, School of Pharmacy, University of Mississippi, Oxford, MS, USA
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Moretti ML, Van Horn CR, Robertson R, Segobye K, Weller SC, Young BG, Johnson WG, Douglas Sammons R, Wang D, Ge X, d' Avignon A, Gaines TA, Westra P, Green AC, Jeffery T, Lespérance MA, Tardif FJ, Sikkema PH, Christopher Hall J, McLean MD, Lawton MB, Schulz B. Glyphosate resistance in Ambrosia trifida: Part 2. Rapid response physiology and non-target-site resistance. PEST MANAGEMENT SCIENCE 2018; 74:1079-1088. [PMID: 28276187 DOI: 10.1002/ps.4569] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Revised: 03/01/2017] [Accepted: 03/02/2017] [Indexed: 05/11/2023]
Abstract
BACKGROUND The glyphosate-resistant rapid response (GR RR) resistance mechanism in Ambrosia trifida is not due to target-site resistance (TSR) mechanisms. This study explores the physiology of the rapid response and the possibility of reduced translocation and vacuolar sequestration as non-target-site resistance (NTSR) mechanisms. RESULTS GR RR leaf discs accumulated hydrogen peroxide within minutes of glyphosate exposure, but only in mature leaf tissue. The rapid response required energy either as light or exogenous sucrose. The combination of phenylalanine and tyrosine inhibited the rapid response in a dose-dependent manner. Reduced glyphosate translocation was observed in GR RR, but only when associated with tissue death caused by the rapid response. Nuclear magnetic resonance studies indicated that glyphosate enters the cytoplasm and reaches chloroplasts, and it is not moved into the vacuole of GR RR, GR non-rapid response or glyphosate-susceptible A. trifida. CONCLUSION The GR RR mechanism of resistance is not associated with vacuole sequestration of glyphosate, and the observed reduced translocation is likely a consequence of rapid tissue death. Rapid cell death was inhibited by exogenous application of aromatic amino acids phenylalanine and tyrosine. The mechanism by which these amino acids inhibit rapid cell death in the GR RR phenotype remains unknown, and it could involve glyphosate phytotoxicity or other agents generating reactive oxygen species. Implications of these findings are discussed. The GR RR mechanism is distinct from the currently described glyphosate TSR or NTSR mechanisms in other species. © 2017 Society of Chemical Industry.
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Affiliation(s)
- Marcelo L Moretti
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA
- Department of Horticulture, Oregon State University, Corvallis, OR, USA
| | - Christopher R Van Horn
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
- United States Department of Agriculture - Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, USA
| | - Renae Robertson
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
| | - Kabelo Segobye
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD, USA
| | - Stephen C Weller
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
| | - Bryan G Young
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA
| | - William G Johnson
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA
| | | | | | - Xia Ge
- Department of Chemistry, Washington University, St Louis, MO, USA
| | - André d' Avignon
- Department of Chemistry, Washington University, St Louis, MO, USA
| | - Todd A Gaines
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | - Philip Westra
- Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, USA
| | - Amanda C Green
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - Taylor Jeffery
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | | | - François J Tardif
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - Peter H Sikkema
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - J Christopher Hall
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - Michael D McLean
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | | | - Burkhard Schulz
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD, USA
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Ngo TD, Malone JM, Boutsalis P, Gill G, Preston C. EPSPS gene amplification conferring resistance to glyphosate in windmill grass (Chloris truncata) in Australia. PEST MANAGEMENT SCIENCE 2018; 74:1101-1108. [PMID: 28317250 DOI: 10.1002/ps.4573] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2017] [Revised: 03/06/2017] [Accepted: 03/11/2017] [Indexed: 05/16/2023]
Abstract
BACKGROUND Five glyphosate-resistant populations of Chloris truncata originally collected from New South Wales were compared with one susceptible (S) population from South Australia to confirm glyphosate resistance and elucidate possible mechanisms of resistance. RESULTS Based on the amounts of glyphosate required to kill 50% of treated plants (LD50 ), glyphosate resistance (GR) was confirmed in five populations of C. truncata (A536, A528, T27, A534 and A535.1). GR plants were 2.4-8.7-fold more resistant and accumulated less shikimate after glyphosate treatment than S plants. There was no difference in glyphosate absorption and translocation between GR and S plants. The EPSPS gene did not contain any point mutation that had previously been associated with resistance to glyphosate. The resistant plants (A528 and A536) contained up to 32-48 more copies of the EPSPS gene than the susceptible plants. CONCLUSION This study has identified EPSPS gene amplification contributing to glyphosate resistance in C. truncata. In addition, a Glu-91-Ala mutation within EPSPS was identified that may contribute to glyphosate resistance in this species. © 2017 Society of Chemical Industry.
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Affiliation(s)
- The D Ngo
- School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia
| | - Jenna M Malone
- School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia
| | - Peter Boutsalis
- School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia
| | - Gurjeet Gill
- School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia
| | - Christopher Preston
- School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia
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Ngo TD, Krishnan M, Boutsalis P, Gill G, Preston C. Target-site mutations conferring resistance to glyphosate in feathertop Rhodes grass (Chloris virgata) populations in Australia. PEST MANAGEMENT SCIENCE 2018; 74:1094-1100. [PMID: 28019078 DOI: 10.1002/ps.4512] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Revised: 12/11/2016] [Accepted: 12/16/2016] [Indexed: 05/25/2023]
Abstract
BACKGROUND Chloris virgata is a warm-season, C4 , annual grass weed affecting field crops in northern Australia that has become an emerging weed in southern Australia. Four populations with suspected resistance to glyphosate were collected in South Australia, Queensland and New South Wales, Australia, and compared with one susceptible (S) population to confirm glyphosate resistance and elucidate possible mechanisms of resistance. RESULTS Based on the rate of glyphosate required to kill 50% of treated plants (LD50 ), glyphosate resistance (GR) was confirmed in four populations of C. virgata (V12, V14.2, V14.16 and V15). GR plants were 2-9.7-fold more resistant and accumulated less shikimate after glyphosate treatment than S plants. GR and S plants did not differ in glyphosate absorption and translocation. Target-site EPSPS mutations corresponding to Pro-106-Leu (V14.2) and Pro-106-Ser (V15, V14.16 and V12) substitutions were found in GR populations. The population with Pro-106-Leu substitution was 2.9-4.9-fold more resistant than the three other populations with Pro-106-Ser substitution. CONCLUSION This report confirms glyphosate resistance in C. virgata and shows that target-site EPSPS mutations confer resistance to glyphosate in this species. The evolution of glyphosate resistance in C. virgata highlights the need to identify alternative control tactics. © 2016 Society of Chemical Industry.
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Affiliation(s)
- The D Ngo
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Adelaide, SA, Australia
| | - Mahima Krishnan
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Adelaide, SA, Australia
| | - Peter Boutsalis
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Adelaide, SA, Australia
| | - Gurjeet Gill
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Adelaide, SA, Australia
| | - Christopher Preston
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, Adelaide, SA, Australia
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Sammons RD, You J, Qi Y, Flasinski S, Kavanaugh C, Washam J, Ostrander E, Wang D, Heck G. Evaluation of glyphosate resistance in Arabidopsis thaliana expressing an altered target site EPSPS. PEST MANAGEMENT SCIENCE 2018; 74:1174-1183. [PMID: 28677849 PMCID: PMC5901408 DOI: 10.1002/ps.4654] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2017] [Revised: 06/15/2017] [Accepted: 06/21/2017] [Indexed: 05/11/2023]
Abstract
BACKGROUND Glyphosate-resistant goosegrass has recently evolved and is homozygous for the double mutant of EPSPS (T102 I, P106 S or TIPS). These same mutations combined with EPSPS overexpression, have been used to create transgenic glyphosate-resistant crops. Arabidopsis thaliana (Wt EPSPS Ki ∼ 0.5 μM) was engineered to express a variant AtEPSPS-T102 I, P106 A (TIPA Ki = 150 μM) to determine the resistance magnitude for a more potent variant EPSPS that might evolve in weeds. RESULTS Transgenic A. thaliana plants, homozygous for one, two or four copies of AtEPSPS-TIPA, had resistance (IC50 values, R/S) as measured by seed production ranging from 4.3- to 16-fold. Plants treated in reproductive stage were male sterile with a range of R/S from 10.1- to 40.6-fold. A significant hormesis (∼ 63% gain in fresh weight) was observed for all genotypes when treated at the initiation of reproductive stage with 0.013 kg ha-1 . AtEPSPS-TIPA enzyme activity was proportional to copy number and correlated with resistance magnitude. CONCLUSIONS A. thaliana, as a model weed expressing one copy of AtEPSPS-TIPA (300-fold more resistant), had only 4.3-fold resistance to glyphosate for seed production. Resistance behaved as a single dominant allele. Vegetative tissue resistance was 4.7-fold greater than reproductive tissue resistance and was linear with gene copy number. © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
| | | | | | | | | | | | - Elizabeth Ostrander
- Division of Oncology, Section of Oncology, Department of Internal MedicineWashington University in St LouisSt LouisMissouriUSA
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Chen J, Jiang C, Huang H, Wei S, Huang Z, Wang H, Zhao D, Zhang C. Characterization of Eleusine indica with gene mutation or amplification in EPSPS to glyphosate. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2017; 143:201-206. [PMID: 29183593 DOI: 10.1016/j.pestbp.2017.09.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 09/21/2017] [Accepted: 09/22/2017] [Indexed: 05/13/2023]
Abstract
The evolution of weed-resistant species threatens the sustainable use of glyphosate, which is the most important herbicide widely used in agriculture worldwide. Moreover, the high glyphosate resistance (>180-fold based on LD50) of Eleusine indica found in Malaysia, which carries a double mutation in its 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS), made the control of this species more difficult. By contrast, the same species carrying the same double mutation in EPSPS (T102I+P106S) but found in China only shows a resistance level of not more than 14-fold based on GR50. The resistance level of this population is four times higher than that of the population carrying a single mutation (P106L). Although the members of this population survive under a high glyphosate dosage of 10,080gaeha-1, their growth was significantly inhibited by glyphosate under the recommend dose (840gaeha-1), where in the fresh weight was 85.4% of the control. EPSPS expression, relative copy number, and EPSPS activity in this population were similar to those of the susceptible population. In addition, the expression of two glutathione transferase (GST) genes (GST-U8 and GST-23) and the enzyme activity of the GST in this population did not significantly differ from those of the susceptible population. This finding is important in elucidating the resistance of the naturally evolved glyphosate-resistant (GR) weed species carrying a double mutation in EPSPS to glyphosate.
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Affiliation(s)
- Jingchao Chen
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Cuilan Jiang
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Hongjuan Huang
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Shouhui Wei
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Zhaofeng Huang
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Huimin Wang
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Dandan Zhao
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China
| | - Chaoxian Zhang
- Key Laboratory of Weed and Rodent Biology and Management, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China.
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Fernández-Moreno PT, Travlos I, Brants I, De Prado R. Different levels of glyphosate-resistant Lolium rigidum L. among major crops in southern Spain and France. Sci Rep 2017; 7:13116. [PMID: 29030627 PMCID: PMC5640615 DOI: 10.1038/s41598-017-13384-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 09/22/2017] [Indexed: 11/09/2022] Open
Abstract
Herbicides are the most effective tools for controlling almost 99% of weeds. However, herbicide resistance is a primary concern in modern agriculture. The characterization in new areas and elucidation of the mechanisms of resistance are of vital importance in maintaining the sustainability of herbicides, including glyphosate. Nine populations of Lolium rigidum, showing different response patterns, were characterized as being glyphosate resistant (GR). The wide range of values in fresh weight reduction, survival, shikimic acid and EPSPS enzyme activity indicates a different or a combination resistance mechanism. The Line-3 population resulted in minimum reduction of fresh weight and survival values with respect to the glyphosate-susceptible (GS) population, showing 16.05- and 17.90-fold higher values, respectively. There were significant differences in the 14C-glyphosate translocation between GR and GS populations. Moreover, there were differences among the nine GR populations, but they exhibited a reduction in the remaining glyphosate translocation in the treated leaf. The EPSPS gene sequence revealed a Pro-106-Ser substitution in four populations, which could be characterized as being GR with non-target-site and target-site resistance mechanisms. This complexity of several resistance mechanisms makes it necessary to develop long-term integrated weed management strategies to limit further resistance dispersal.
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Affiliation(s)
| | - Ilias Travlos
- Faculty of Crop Science, Agricultural University of Athens, Athens, Greece
| | - Ivo Brants
- Monsanto Europe SA, 1150, Brussels, Belgium
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071, Cordoba, Spain
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Tao B, Shao BH, Qiao YX, Wang XQ, Chang SJ, Qiu LJ. Identification and functional analysis of a new glyphosate resistance gene from a fungus cDNA library. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2017; 140:65-68. [PMID: 28755696 DOI: 10.1016/j.pestbp.2017.05.013] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2016] [Revised: 04/01/2017] [Accepted: 05/26/2017] [Indexed: 06/07/2023]
Abstract
Glyphosate is a widely used broad spectrum herbicide; however, this limits its use once crops are planted. If glyphosate-resistant crops are grown, glyphosate can be used for weed control in crops. While several glyphosate resistance genes are used in commercial glyphosate tolerant crops, there is interest in identifying additional genes for glyphosate tolerance. This research constructed a high-quality cDNA library form the glyphosate-resistant fungus Aspergillus oryzae RIB40 to identify genes that may confer resistance to glyphosate. Using a medium containing glyphosate (120mM), we screened several clones from the library. Based on a nucleotide sequence analysis, we identified a gene of unknown function (GenBank accession number: XM_001826835.2) that encoded a hypothetical 344-amino acid protein. The gene was named MFS40. Its ORF was amplified to construct an expression vector, pGEX-4T-1-MFS40, to express the protein in Escherichia coli BL21. The gene conferred glyphosate tolerance to E. coli ER2799 cells.
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Affiliation(s)
- Bo Tao
- College of Agronomy, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China.
| | - Bai-Hui Shao
- College of Agronomy, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Yu-Xin Qiao
- College of Agronomy, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Xiao-Qin Wang
- College of Agronomy, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Shu-Jun Chang
- College of Agronomy, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Li-Juan Qiu
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China
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Gherekhloo J, Fernández-Moreno PT, Alcántara-de la Cruz R, Sánchez-González E, Cruz-Hipolito HE, Domínguez-Valenzuela JA, De Prado R. Pro-106-Ser mutation and EPSPS overexpression acting together simultaneously in glyphosate-resistant goosegrass (Eleusine indica). Sci Rep 2017; 7:6702. [PMID: 28751654 PMCID: PMC5532362 DOI: 10.1038/s41598-017-06772-1] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2017] [Accepted: 06/16/2017] [Indexed: 11/09/2022] Open
Abstract
Glyphosate has been used for more than 15 years for weed management in citrus groves in the Gulf of Mexico, at up to 3-4 applications per year. Goosegrass (Eleusine indica (L.) Gaertn.) control has sometimes failed. In this research, the mechanisms governing three goosegrass biotypes (Ein-Or from an orange grove, and Ein-Pl1 and Ein-Pl2 from Persian lime groves) with suspected resistance to glyphosate were characterized and compared to a susceptible biotype (Ein-S). Dose-response and shikimate accumulation assays confirmed resistance of the resistant (R) biotypes. There were no differences in glyphosate absorption, but the R biotypes retained up to 62-78% of the herbicide in the treated leaf at 96 h after treatment (HAT), in comparison to the Ein-S biotype (36%). The 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) activity in the Ein-Or and Ein-S biotypes was over 100-fold lower than the Ein-Pl1 and Ein-Pl2 ones. The latter showed a high EPSPS-basal activity, a mutation at Pro-106-Ser position in the EPSPS gene, and EPSPS overexpression. The EPSPS basal and EPSPS overexpression were positively correlated. The R goosegrass biotypes displayed poor glyphosate translocation. Furthermore, this grassweed showed, for the first time, two mechanisms at the target-site level (Pro-106-Ser mutation + EPSPS overexpression) acting together simultaneously against glyphosate.
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Affiliation(s)
- Javid Gherekhloo
- Department of Agronomy, Gorgan University of Agricultural Sciences and Natural Resources, 49189-43464, Gorgan, Iran
| | - Pablo T Fernández-Moreno
- Department of Agricultural Chemistry and Edaphology, Campus of Rabanales, University of Cordoba, 14071, Cordoba, Spain
| | | | | | | | | | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, Campus of Rabanales, University of Cordoba, 14071, Cordoba, Spain
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Karn E, Jasieniuk M. Genetic diversity and structure of Lolium perenne ssp. multiflorum in California vineyards and orchards indicate potential for spread of herbicide resistance via gene flow. Evol Appl 2017; 10:616-629. [PMID: 28616068 PMCID: PMC5469165 DOI: 10.1111/eva.12478] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Accepted: 03/05/2017] [Indexed: 11/28/2022] Open
Abstract
Management of agroecosystems with herbicides imposes strong selection pressures on weedy plants leading to the evolution of resistance against those herbicides. Resistance to glyphosate in populations of Lolium perenne L. ssp. multiflorum is increasingly common in California, USA, causing economic losses and the loss of effective management tools. To gain insights into the recent evolution of glyphosate resistance in L. perenne in perennial cropping systems of northwest California and to inform management, we investigated the frequency of glyphosate resistance and the genetic diversity and structure of 14 populations. The sampled populations contained frequencies of resistant plants ranging from 10% to 89%. Analyses of neutral genetic variation using microsatellite markers indicated very high genetic diversity within all populations regardless of resistance frequency. Genetic variation was distributed predominantly among individuals within populations rather than among populations or sampled counties, as would be expected for a wide-ranging outcrossing weed species. Bayesian clustering analysis provided evidence of population structuring with extensive admixture between two genetic clusters or gene pools. High genetic diversity and admixture, and low differentiation between populations, strongly suggest the potential for spread of resistance through gene flow and the need for management that limits seed and pollen dispersal in L. perenne.
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Affiliation(s)
- Elizabeth Karn
- University of California DavisDepartment of Plant SciencesDavisCAUSA
| | - Marie Jasieniuk
- University of California DavisDepartment of Plant SciencesDavisCAUSA
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Dominguez-Valenzuela JA, Gherekhloo J, Fernández-Moreno PT, Cruz-Hipolito HE, Alcántara-de la Cruz R, Sánchez-González E, De Prado R. First confirmation and characterization of target and non-target site resistance to glyphosate in Palmer amaranth (Amaranthus palmeri) from Mexico. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2017; 115:212-218. [PMID: 28384561 DOI: 10.1016/j.plaphy.2017.03.022] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 03/27/2017] [Accepted: 03/28/2017] [Indexed: 06/07/2023]
Abstract
Following the introduction of glyphosate-resistant (GR)-cotton crops in Mexico, farmers have relied upon glyphosate as being the only herbicide for in-season weed control. Continuous use of glyphosate within the same year and over multiple successive years has resulted in the selection of glyphosate resistance in Palmer amaranth (Amarantus palmeri). Dose-response assays confirmed resistance in seven different accessions. The resistance ratio based on GR50 values (50% growth reduction) varied between 12 and 83. At 1000 μM glyphosate, shikimic acid accumulation in the S-accession was 30- to 2-fold higher at compared to R-accessions. At 96 h after treatment, 35-44% and 61% of applied 14C-glyphosate was taken up by leaves of plants from R- and S-accessions, respectively. At this time, a significantly higher proportion of the glyphosate absorbed remained in the treated leaf of R-plants (55-69%) compared to S-plants (36%). Glyphosate metabolism was low and did not differ between resistant and susceptible plants. Glyphosate was differentially metabolized to AMPA and glyoxylate in plants of R- and S-accessions, although it was low in both accessions (<10%). There were differences in 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) enzyme activity by 50% (I50) between R- and S-accessions. However, no significant differences were found in the basal EPSPS activity (μmol inorganic phosphate μg-1 total soluble protein min-1) between R- and S-accessions. A point mutation Pro-106-Ser was evidenced in three accessions. The results confirmed the resistance of Palmer amaranth accessions to glyphosate collected from GR-cotton crops from Mexico. This is the first study demonstrating glyphosate-resistance in Palmer amaranth from Mexico.
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Affiliation(s)
| | - Javid Gherekhloo
- Department of Agronomy, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Iran.
| | | | | | | | - Eduardo Sánchez-González
- Department of Agricultural Parasitology, Chapingo Autonomous University, Road México-Texcoco Km. 38.5, 56230 Texcoco, Mexico.
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, 14071 Cordoba, Spain.
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Fernández-Moreno PT, Bastida F, De Prado R. Evidence, Mechanism and Alternative Chemical Seedbank-Level Control of Glyphosate Resistance of a Rigid Ryegrass ( Lolium rigidum) Biotype from Southern Spain. FRONTIERS IN PLANT SCIENCE 2017; 8:450. [PMID: 28424723 PMCID: PMC5372819 DOI: 10.3389/fpls.2017.00450] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2017] [Accepted: 03/15/2017] [Indexed: 05/26/2023]
Abstract
Rigid ryegrass (Lolium rigidum) is one of the most troublesome weeds in different crops in the Mediterranean region. A rigid ryegrass biotype from an olive grove in Jaén province (Andalusía, southern Spain), potentially resistant to glyphosate (RG), was tested for its resistance level through dose-response assays using a susceptible biotype (SG). To test the hypothesis of a non-target-site-based resistance, as point mutations are far less common mechanisms of glyphosate resistance, studies were also conducted to elucidate whether resistance was associated with biochemical, metabolism, molecular and/or physiological mechanisms. Alternative herbicide-based control options, including single-herbicide or herbicide mixtures with glyphosate, applied at seedling, tillering or full heading stages, were tested in field experiments for 2 years for their efficacy against rigid ryegrass plants and their effects on the soil seed bank. Resistance levels of the RG biotype were 23- (LD50) and 7-fold (GR50) higher compared to the SG biotype. The SG biotype exhibited a significantly greater shikimic acid accumulation than the RG one. At 96 HAT, 58 and 89% of applied 14C-glyphosate was up taken by leaves of RG and SG biotype plants, respectively, and, at this time, a significantly higher proportion of the glyphosate taken up by the treated leaf remained in its tissue in RG plants compared to the SG ones. The RG biotype did not reveal any point mutation in the glyphosate target site EPSP synthase. Overall, results confirmed reduced glyphosate uptake and translocation as being the mechanism involved in glyphosate resistance in the RG biotype. RG biotype responses to the alternative treatments tested in situ indicated that herbicide applications at the later growth stage tended to be less effective in terms of immediate effects on population size than earlier applications, and that only in some cases, the removal of at least 85% of the RG biotype was achieved. However, with few exceptions, the alternative treatments tested appeared to be highly effective in reducing the seed bank irrespective of the growth stage. The frequency of the resistant phenotype in the progeny of surviving plants of the RG biotype was dependent on treatment. Results suggest that a potential exists for effective management of glyphosate-resistant rigid ryegrass in olive groves in southern Spain.
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Affiliation(s)
| | - Fernando Bastida
- Department of Agroforestry Sciences, University of HuelvaHuelva, Spain
| | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of CórdobaCórdoba, Spain
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Bracamonte ER, Fernández-Moreno PT, Bastida F, Osuna MD, Alcántara-de la Cruz R, Cruz-Hipolito HE, De Prado R. Identifying Chloris Species from Cuban Citrus Orchards and Determining Their Glyphosate-Resistance Status. FRONTIERS IN PLANT SCIENCE 2017; 8:1977. [PMID: 29187862 PMCID: PMC5694787 DOI: 10.3389/fpls.2017.01977] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Accepted: 11/02/2017] [Indexed: 05/12/2023]
Abstract
The Chloris genus is a C4 photosynthetic species mainly distributed in tropical and subtropical regions. Populations of three Chloris species occurring in citrus orchards from central Cuba, under long history glyphosate-based weed management, were studied for glyphosate-resistant status by characterizing their herbicide resistance/tolerance mechanisms. Morphological and molecular analyses allowed these species to be identified as C. ciliata Sw., Chloris elata Desv., and Chloris barbata Sw. Based on the glyphosate rate that causes 50% mortality of the treated plants, glyphosate resistance (R) was confirmed only in C. elata, The R population was 6.1-fold more resistant compared to the susceptible (S) population. In addition, R plants of C. elata accumulated 4.6-fold less shikimate after glyphosate application than S plants. Meanwhile, populations of C. barbata and C. ciliata with or without glyphosate application histories showed similar LD50 values and shikimic acid accumulation rates, demonstrating that resistance to glyphosate have not evolved in these species. Plants of R and S populations of C. elata differed in 14C-glyphosate absorption and translocation. The R population exhibited 27.3-fold greater 5-enolpyruvyl shikimate-3-phosphate synthase (EPSPS) activity than the S population due to a target site mutation corresponding to a Pro-106-Ser substitution found in the EPSPS gene. These reports show the innate tolerance to glyphosate of C. barbata and C. ciliata, and confirm the resistance of C. elata to this herbicide, showing that both non-target site and target-site mechanisms are involved in its resistance to glyphosate. This is the first case of herbicide resistance in Cuba.
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Affiliation(s)
- Enzo R. Bracamonte
- Faculty of Agricultural Sciences, National University of Cordoba (UNC), Cordoba, Argentina
| | | | - Fernando Bastida
- Department of Agroforestry Sciences, University of Huelva, Huelva, Spain
| | - María D. Osuna
- Agrarian Research Center “Finca La Orden Valdesequera”, Badajoz, Spain
| | - Ricardo Alcántara-de la Cruz
- Departamento de Entomologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, Brazil
- *Correspondence: Ricardo Alcántara-de la Cruz
| | | | - Rafael De Prado
- Department of Agricultural Chemistry and Edaphology, University of Cordoba, Cordoba, Spain
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50
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Karn E, Jasieniuk M. Nucleotide Diversity at Site 106 of EPSPS in Lolium perenne L. ssp. multiflorum from California Indicates Multiple Evolutionary Origins of Herbicide Resistance. FRONTIERS IN PLANT SCIENCE 2017; 8:777. [PMID: 28536598 PMCID: PMC5423406 DOI: 10.3389/fpls.2017.00777] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Accepted: 04/25/2017] [Indexed: 05/15/2023]
Abstract
The repeated evolution of herbicide resistance in weeds is an ongoing problem in agricultural regions across the world, and presents a unique system in which to study the origins and spread of adaptive traits across heterogeneous landscapes. Lolium perenne ssp. multiflorum (Lam.) (Italian ryegrass) is a widespread grass weed of agricultural crops that has repeatedly evolved resistance to herbicides across the world. In California, resistance to glyphosate has become increasingly common. To identify the mechanisms conferring glyphosate resistance in California populations of L. perenne and to gain insights into the evolutionary origins and spread of resistance in the region, we investigated the frequency of target-site mutations conferring resistance to glyphosate combined with the frequency of resistant individuals in 14 populations. A region of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) was sequenced in 401 individuals to assay for target site mutations. Seven unique alleles were detected at codon site 106, four of which have been previously shown to confer target-site-based resistance to glyphosate. Four different resistance alleles were detected, indicating that resistance to glyphosate has evolved multiple times in the region. In two populations, no EPSPS mutations were detected despite the presence of resistant plants, strongly suggesting that non-target-site-based mechanisms confer resistance to glyphosate in these populations. It is likely that resistance to glyphosate in these 14 California populations of L. perenne derives from at least five evolutionary origins, indicating that adaptive traits can evolve repeatedly over agricultural landscapes.
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