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Zhao Y, Ding Y, Peng Y, Wang Y, Han S, Zhu L, Huang SH, Hong R. Total Synthesis of Immunosuppressive Mycestericin E and G Enabled by a Highly Stereoselective Nitroso-Ene Cyclization. Org Lett 2023; 25:3497-3501. [PMID: 37154579 DOI: 10.1021/acs.orglett.3c01082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
This report describes a streamlined synthesis of immunosuppressive mycestericin E and G through a highly stereoselective nitroso-ene cyclization in 11-12 steps using readily available materials. The stereochemical outcome in the formation of a Nα-quaternary stereogenic center is rationalized by a trajectory based on the polar diradical intermediate and subsequent hydrogen transfer. Julia olefination offers a facile chain elongation method that presents a viable strategy for structural derivatization in future medicinal applications.
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Affiliation(s)
- Yao Zhao
- School of Environmental and Chemical Engineering, Shanghai Institute of Technology, Shanghai 201418, PR China
| | - Yuzhen Ding
- Innovation Research Institute of Traditional Chinese Medicine (IRI), Shanghai University of Traditional Chinese Medicine, 1200 Cailun Road, Shanghai 201203, PR China
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, PR China
| | - Yalan Peng
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, PR China
| | - Yang Wang
- School of Environmental and Chemical Engineering, Shanghai Institute of Technology, Shanghai 201418, PR China
| | - Shiqing Han
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, PR China
| | - Lili Zhu
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, PR China
| | - Sha-Hua Huang
- School of Environmental and Chemical Engineering, Shanghai Institute of Technology, Shanghai 201418, PR China
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, PR China
| | - Ran Hong
- Innovation Research Institute of Traditional Chinese Medicine (IRI), Shanghai University of Traditional Chinese Medicine, 1200 Cailun Road, Shanghai 201203, PR China
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, PR China
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2
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Li QZ, Hou SH, Kang JC, Lian PF, Hao Y, Chen C, Zhou J, Ding TM, Zhang SY. Bioinspired Palladium-Catalyzed Intramolecular C(sp 3 )-H Activation for the Collective Synthesis of Proline Natural Products. Angew Chem Int Ed Engl 2022; 61:e202207088. [PMID: 35751877 DOI: 10.1002/anie.202207088] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Indexed: 12/18/2022]
Abstract
Bioinspired palladium-catalyzed intramolecular cyclization of amino acid derivatives containing a vinyl iodide moiety by C-H activation enabled rapid access to a wide range of functionalized proline derivatives with an exocyclic olefin. To demonstrate the practicality of this methodology, the functionalized prolines were used as intermediates for the synthesis of several natural products: lucentamycin A, oxotomaymycin, oxoprothracarcin, and barmumycin.
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Affiliation(s)
- Quan-Zhe Li
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China.,School of Pharmaceutical Sciences, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Si-Hua Hou
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China.,School of Pharmaceutical Sciences, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Jun-Chen Kang
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Peng-Fei Lian
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Yu Hao
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Chao Chen
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Jia Zhou
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Tong-Mei Ding
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Shu-Yu Zhang
- Shanghai Key Laboratory for Molecular Engineer of Chiral Drugs, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
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Li QZ, Hou SH, Kang JC, Lian PF, Hao Y, Chen C, Zhou J, Ding TM, Zhang SY. Bioinspired Palladium‐Catalyzed Intramolecular C(sp3)−H Activation for the Collective Synthesis of Proline Natural Products. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202207088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Quan-Zhe Li
- Shanghai Jiao Tong University Chemistry CHINA
| | - Si-Hua Hou
- SJTU: Shanghai Jiao Tong University CHEMISTRY CHINA
| | | | | | - Yu Hao
- SJTU: Shanghai Jiao Tong University Chemistry CHINA
| | - Chao Chen
- SJTU: Shanghai Jiao Tong University Chemistry CHINA
| | - Jia Zhou
- SJTU: Shanghai Jiao Tong University Chemistry CHINA
| | | | - Shu-Yu Zhang
- Shanghai Jiao Tong University School of Chemistry and Chemical Engineering 800 Dongchuan RoadB329 Chemsitry BuildingShanghai Jiao Tong University 200240 Shanghai CHINA
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Cai W, Wu J, Zhang H, Jalani HB, Li G, Lu H. Rh-Catalyzed Chemoselective [4 + 1] Cycloaddition Reaction toward Diverse 4-Methyleneprolines. J Org Chem 2019; 84:10877-10891. [DOI: 10.1021/acs.joc.9b01466] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Wangshui Cai
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
| | - Junxian Wu
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
| | - Haowei Zhang
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
| | - Hitesh B. Jalani
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
- Smart BioPharm, 310-Pilotplant, Incheon Techno-Park, 12-Gaetbeol-ro, Yeonsu-gu, Incheon 21999, South Korea
- College of Pharmacy, Yonsei University, 85-Songdogwahak-ro, Incheon 21983, South Korea
| | - Guigen Li
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas 79409-1061, United States
| | - Hongjian Lu
- Institute of Chemistry & BioMedical Sciences, Nanjing University, Nanjing 210023, China
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Synthesis of five natural butanolides. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.04.046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Takahashi K, Fukushima K, Tsubuki M, Honda T. The formal synthesis of lucentamycin A: Construction of cis -2,3-disubstituted pyrrolidine core by application of SmI 2 -DMPU system. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.02.076] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Cocco M, Garella D, Di Stilo A, Borretto E, Stevanato L, Giorgis M, Marini E, Fantozzi R, Miglio G, Bertinaria M. Electrophilic warhead-based design of compounds preventing NLRP3 inflammasome-dependent pyroptosis. J Med Chem 2014; 57:10366-82. [PMID: 25418070 DOI: 10.1021/jm501072b] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Pyroptosis is a caspase-1-dependent pro-inflammatory form of programmed cell death implicated in the pathogenesis of autoinflammatory diseases as well as in disorders characterized by excessive cell death and inflammation. Activation of NLRP3 inflammasome is a key event in the pyroptotic cascade. In this study, we describe the synthesis and chemical tuning of α,β-unsaturated electrophilic warheads toward the development of antipyroptotic compounds. Their pharmacological evaluation and structure-activity relationships are also described. Compound 9 was selected as a model of this series, and it proved to be a reactive Michael acceptor, irreversibly trapping thiol nucleophiles, which prevented both ATP- and nigericin-triggered pyroptosis of human THP-1 cells in a time- and concentration-dependent manner. Moreover, 9 and other structurally related compounds, inhibited caspase-1 and NLRP3 ATPase activities. Our findings can contribute to the development of covalent, multitarget antipyroptotic compounds targeting molecular components of the NLRP3 inflammasome regulatory pathway.
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Affiliation(s)
- Mattia Cocco
- Dipartimento di Scienza e Tecnologia del Farmaco, Università degli Studi di Torino , Via P. Giuria 9, 10125 Torino, Italy
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9
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Ranatunga S, Tang CHA, Hu CCA, Del Valle JR. Total synthesis and structural revision of lucentamycin A. J Org Chem 2012; 77:9859-64. [PMID: 23039096 DOI: 10.1021/jo301723y] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Lucentamycin A is a marine-derived peptide natural product harboring a unique 4-ethylidene-3-methylproline (Emp) subunit. The proposed structure of lucentamycin A and the core Emp residue have recently been called into question through synthesis. Here, we report the first total synthesis of lucentamycin A, which confirms that the ethylidene substituent in Emp bears an E geometry, in contrast to the originally assigned Z configuration. Synthesis of the desired (E)-Emp subunit required the implementation of a novel strategy starting from Garner's aldehyde.
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Affiliation(s)
- Sujeewa Ranatunga
- Drug Discovery Department, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612, United States
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Selim KB, Lee BK, Sim T. Stereoselective total synthesis of the E-isomer of putative lucentamycin A. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.08.092] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Cha JW, Park JS, Sim T, Nam SJ, Kwon HC, Del Valle JR, Fenical W. Structure assignment of lucentamycin E and revision of the olefin geometries of the marine-derived lucentamycins. JOURNAL OF NATURAL PRODUCTS 2012; 75:1648-1651. [PMID: 22953793 PMCID: PMC3689542 DOI: 10.1021/np3003854] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
A new lucentamycin analogue, lucentamycin E (5), was isolated from the culture broth of the marine-derived actinomycete Nocardiopsis lucentensis, strain CNR-712. The absolute stereostructure of 5 was assigned by comprehensive analyses of NMR data and by application of the advanced Marfey's method. The planar structure of 5 was analogous to lucentamycins A-D, whereas the olefin geometry of the 3-methyl-4-ethylideneproline moiety was found to be E, opposite of that previously reported. Consequently, a reinvestigation of the olefin geometries of the 3-methyl-4-ethylideneproline residues of lucentamycins A-D showed that the olefin geometries of the substituted proline functionalities must be revised to (2S,3R,E)-3-methyl-4-ethylideneproline.
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Affiliation(s)
- Jin Wook Cha
- Natural Medicine Center, Korea Institute of Science and Technology, Gangneung, Gangwon-do 210–340, Republic of Korea
| | - Jin-Soo Park
- Natural Medicine Center, Korea Institute of Science and Technology, Gangneung, Gangwon-do 210–340, Republic of Korea
| | - Taebo Sim
- Korea Institute of Science and Technology, Cheongryang, Seoul 130–650, Republic of Korea
| | - Sang Jip Nam
- Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093-0204, USA
| | - Hak Cheol Kwon
- Natural Medicine Center, Korea Institute of Science and Technology, Gangneung, Gangwon-do 210–340, Republic of Korea
| | - Juan R. Del Valle
- Drug Discovery Department, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612, USA
| | - William Fenical
- Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093-0204, USA
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Berlinck RGS, Trindade-Silva AE, Santos MFC. The chemistry and biology of organic guanidine derivatives. Nat Prod Rep 2012; 29:1382-406. [PMID: 22991131 DOI: 10.1039/c2np20071f] [Citation(s) in RCA: 121] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The chemistry and biology of organic natural guanidines are reviewed, including the isolation, structure determination, synthesis, biosynthesis and biological activities of alkaloids, non-ribosomal peptides, guanidine-bearing terpenes, polyketides and shikimic acid derivatives from natural sources.
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Affiliation(s)
- Roberto G S Berlinck
- Instituto de Química de São Carlos, Universidade de São Paulo, CP 780, CEP 13560-970, São Carlos, SP, Brasil.
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