Adlayer Structure of and Electrochemical O2 Reduction on Cobalt Porphine-Modified and Cobalt Octaethylporphyrin-Modified Au(111) in HClO4

Octaethyl vs Tetrabenzo Functionalized Ru Porphyrins on Ag(111): Molecular Conformation, Self-Assembly and Electronic Structure

Metalloporphyrins on interfaces offer a rich playground for functional materials and hence have been subjected to intense scrutiny over the past decades. As the same porphyrin macrocycle on the same surface may exhibit vastly different physicochemical properties depending on the metal center and its substituents, it is vital to have a thorough structural and chemical characterization of such systems. Here, we explore the distinctions arising from coverage and macrocycle substituents on the closely related ruthenium octaethyl porphyrin and ruthenium tetrabenzo porphyrin on Ag(111). Our investigation employs a multitechnique approach in ultrahigh vacuum, combining scanning tunneling microscopy, low-energy electron diffraction, photoelectron spectroscopy, normal incidence X-ray standing wave, and near-edge X-ray absorption fine structure, supported by density functional theory. This methodology allows for a thorough examination of the nuanced differences in the self-assembly, substrate modification, molecular conformation and adsorption height.

Unveiling the Role of Pyridinic Nitrogen and Diacetylene in the Hydrogen Evolution Reaction through Model Catalysts Prepared by On-Surface Reactions

Metal-free carbon materials (MFCMs) have extensive applications in electrocatalysis because of their comparable catalytic activity to that of Pt/C in some cases. Understanding the structure-property relationship is crucial for the reasonable design of more efficient catalysts. To reveal the structure-property relationship of the hydrogen evolution reaction (HER), we prepared nanowire model catalysts on single-crystalline Au(111) electrodes through state-of-the-art on-surface synthesis. Temperature-dependent experiments were conducted to evaluate the HER activity of the nanoribbons functionalized with pyridinic nitrogen and diacetylene. According to our electrochemical results (overpotential, current density j0, and apparent activation energy), we demonstrate that the participation of diacetylene can promote the catalytic reaction for the HER through a synergistic effect. Based on the analysis of the activation entropy for the model catalysts, we attribute the synergistic effect of diacetylene groups to the large area of π···H-O bonding in the electric double layer, thus providing direct insight into the structural-property relationship of polymerized nanoribbons for the HER through the rational design of precursor structures. The nanoribbons prepared by on-surface synthesis can serve as prototype systems for model catalytic research on MFCMs.

Designed Production of Atomic-Scale Nanowindows in Single-Walled Carbon Nanotubes

The controlled production of nanowindows in graphene layers is desirable for the development of ultrathin membranes. Herein, we propose a single-atom catalytic oxidation method for introducing nanowindows into the graphene layers of single-walled carbon nanotubes (SWCNTs). Using liquid-phase adsorption, copper(II) 2,3,9,10,16,17,23,24-octakis(octyloxy)-29H,31H-phthalocyanine (CuPc) was adsorbed on SWCNT bundles at a surface coverage of 0.9. Subsequently, narrow nanowindows with a number density of 0.13 nm^-2 were produced by oxidation above 550 K, which is higher than the decomposition temperature of bulk CuPc. In particular, oxidation of the CuPc-adsorbed SWCNTs at 623 K increased the surface area from 280 to 1690 m² g^-1 owing to the efficient production of nanowindows. The nanowindow size was estimated to be similar to the molecular size of N₂ based on the pronounced low-pressure adsorption hysteresis in the N₂ adsorption isotherm. In addition, the enthalpy change for the nanowindow-formation equilibrium decreased by 4 kJ mol^-1 when CuPc was present, further evidencing the catalytic effect of the Cu atoms supplied by the adsorbed CuPc molecules.

Role of the Supporting Surface in the Thermodynamics and Cooperativity of Axial Ligand Binding to Metalloporphyrins at Interfaces

Abstract:

: Metalloporphyrins have been shown to bind axial ligands in a variety of environments including the vacuum/solid and solution/solid interfaces. Understanding the dynamics of such interactions is a desideratum for the design and implementation of next generation molecular devices which draw inspiration from biological systems to accomplish diverse tasks such as molecular sensing, electron transport, and catalysis to name a few. In this article, we review the current literature of axial ligand coordination to surface-supported porphyrin receptors. We will focus on the coordination process as monitored by scanning tunneling microscopy (STM) that can yield qualitative and quantitative information on the dynamics and binding affinity at the single molecule level. In particular, we will address the role of the substrate and intermolecular interactions in influencing cooperative effects (positive or negative) in the binding affinity of adjacent molecules based on experimental evidence and theoretical calculations.

Stabilization and activation of molecular oxygen at biomimetic tetrapyrroles on surfaces: from UHV to near-ambient pressure

Recent advances in the development of surface science methods have allowed bridging, at least partially, the pressure gap between the ultra-high vacuum environment and some applicative conditions. This step has been particularly critical for the characterization of heterogenous catalytic systems (solid-liquid, solid-gas interfaces) and, specifically, of the electronic, structural, and chemical properties of tetrapyrroles at surfaces when arranged in 2D networks. Within a biomimetic picture, in which 2D metalorganic frameworks are expected to model and reproduce in a tailored way the activity of their biochemical proteic counterparts, the fundamental investigation of the adsorption and activation of small ligands at the single-metal atom reaction sites has progressively gained increasing attention. Concerning oxygen, biology offers a variety of tetrapyrrole-based transport and reaction pockets, as e.g. in haemoglobin, myoglobin or cytochrome proteins. Binding and activation of O2 are accomplished thanks to complex charge transfer and spin realignment processes, sometimes requiring cooperative mechanisms. Within the framework of surface science at near-ambient pressure (towards and beyond the mbar regime), recent progress has unveiled novel and interesting properties of 2D metalorganic frameworks and heterostacks based on self-assembled tetrapyrroles, thus opening possible, effective applicative routes in the fields of light harvesting, heterogenous (electro-)catalysts, chemical sensing, and spintronics.

Single molecule level studies of reversible ligand binding to metal porphyrins at the solution/solid interface

Ligands bind reversibly to metal porphyrins in processes such as molecular recognition, electron transport and catalysis. These chemically relevant processes are ubiquitous in biology and are important in technological applications. In this article, we focus on the current advances in ligand binding to metal porphyrin receptors noncovalently bound at the solution/solid interface. In particular, we restrict ourselves to studies at the single molecule level. Dynamics of the binding/dissociation process can be monitored by scanning tunneling microscopy (STM) and can yield both qualitative and quantitative information about ligand binding affinity and the energetics that define a particular ligation reaction. Molecular and time dependent imaging can establish whether the process under study is at equilibrium. Ligand-concentration-dependent studies have been used to determine adsorption isotherms and thermodynamic data for processes occurring at the solution/solid interface. In several binding reactions, the solid support acted as an electron-donating fifth coordination site, thereby significantly changing the metal porphyrin receptor’s affinity for exogenous ligands. Supporting calculations provide insight into the metalloporphyrin/support and ligand–metalloporphyrin/support interactions and their energetics.

Dioxygen at Biomimetic Single Metal-Atom Sites: Stabilization or Activation? The Case of CoTPyP/Au(111)

By means of a combined experimental and computational approach, we show that a 2D metal–organic framework self-assembled at the Au(111) termination is able to mimic the O2 stabilization and activation mechanisms that are typical of the biochemical environment of proteins and enzymes. 5,10,15,20-tetra(4-pyridyl)21H,23H-porphyrin cobalt(III) chloride (CoTPyP) molecules on Au(111) bind dioxygen forming a covalent bond at the Co center, yielding charge injection into the ligand by exploiting the surface trans-effect. A weakening of the O–O bond occurs, together with the development of a dipole moment, and a change in the molecule’s magnetic moment. Also the bonding geometry is similar to the biological counterpart, with the O2 molecule sitting on-top of the Co atom and the molecular axis tilted by 118°. The ligand configuration lays between the oxo- and the superoxo-species, in agreement with the observed O–O stretching frequency measured in situ at near-ambient pressure conditions.

Nature-inspired electrocatalysts and devices for energy conversion

A NICE approach for the design of nature-inspired electrocatalysts and electrochemical devices for energy conversion.

The effect of translation on the binding energy for transition-metal porphyrines adsorbed on Ag(111) surface

The characteristics of interaction between six transition-metal porphyrines and the Ag(111) surface are detailed here as resulted from DFT calculations. Van der Waals interactions as well as the strong correlation in 3d orbitals of transition metals were taken into account in all calculations, including the structural relaxation. For each system we investigate four relative positions of the metallic atom on top the surface. We show that the interaction between the transition metal and silver is the result of a combination between the dispersion interaction, charge transfer and weak chemical interaction. The detailed analysis of the physical properties, such as dipolar and magnetic moments and the molecule-surface charge transfer, analyzed for different geometric configurations allows us to propose qualitative models, relevant for the understanding of the self-assembly processes and related phenomena.

Modulating Electrocatalysis on Graphene Heterostructures: Physically Impermeable Yet Electronically Transparent Electrodes

The electronic properties and extreme thinness of graphene make it an attractive platform for exploring electrochemical interactions across dissimilar environments. Here, we report on the systematic tuning of the electrocatalytic activity toward the oxygen reduction reaction (ORR) via heterostructures formed by graphene modified with a metal underlayer and an adlayer consisting of a molecular catalyst. Systematic voltammetric testing and electrochemical imaging of patterned electrodes allowed us to confidently probe modifications on the ORR mechanisms and overpotential. We found that the surface configuration largely determined the ORR mechanism, with adlayers of porphyrin molecular catalysts displaying a higher activity for the 2e^- pathway than the bare basal plane of graphene. Surprisingly, however, the underlayer material contributed substantially to lower the activation potential for the ORR in the order Pt > Au > SiO _x, strongly suggesting the involvement of the solution-excluded metal on the reaction. Computational investigations suggest that ORR enhancements originate from permeation of metal d-subshell electrons through the graphene layer. In addition, these physically impermeable but electronically transparent electrodes displayed tolerance to cyanide poisoning and stability toward long-term cycling, highlighting graphene as an effective protection layer of noble metal while enabling electrochemical interactions. This work has implications in the mechanistic understanding of 2D materials and core-shell-type heterostructures for electrocatalytic reactions.

A glassy carbon electrode modified by a triply-fused-like Co(ii) polyporphine and its ability for sulphite oxidation and detection

An original Co(ii) porphyrin conductive polymer is electrosynthesized which efficiently catalyzes sulphite oxidation in water offering opportunities for sensor development.

Study of iron oxide nanoparticle phases in graphene aerogels for oxygen reduction reaction

Four iron oxide phases incorporated in a graphene support were examined; differences in their catalytic properties depended on their phases.

A facile approach for the synthesis of copper(ii) myristate strips and their electrochemical activity towards the oxygen reduction reaction

Copper(ii) myristate strips, an inexpensive, straight chain compound of copper act as active electrocatalyst in oxygen reduction reaction.

Tuning Porphyrin Assembly and Electrochemical Catalytic Activity with Halogen Substituents

The adlayers of three metalloporphyrins, 5,10,15,20-tetrakis(4-methoxyphenyl)porphyrin cobalt(II) (CoTMePP), 5,10,15,20-tetrakis(4-bromophenyl)porphyrin cobalt(II) (CoTBrPP), and 5,10,15,20-tetrakis(4-iodophenyl)porphyrin cobalt(II) (CoTIPP), on Au(111) were investigated at the solid-liquid interface under electrochemical conditions. In situ scanning tunneling microscopy (STM) was employed to investigate the adlayer structures of CoTMePP, CoTBrPP, and CoTIPP in HClO4 solution. Highly ordered adlayers of the three metalloporphyrins were formed on the Au(111) electrode surface by simple immersion into benzene solutions containing each compound. The adlayer structure of the three cobalt porphyrin derivatives was influenced by the functional group on the phenyl moieties. In particular, a characteristic molecular assembly of CoTIPP molecules was found on Au(111) as a result of the I···I interactions between CoTIPP molecules. The adlattice constants increased in the order -OCH3 < -Br < -I in the phenyl groups. The in situ STM observations showed that the CoTMePP adlayer changed during positive potential manipulation in 0.1 M HClO4, whereas these adlayers were stable in the potential range from 0.90 to 0 V versus the reversible hydrogen electrode. A dependence upon the functional groups among the three CoTPP derivatives was clearly found in the adlattice constants and O2 reduction potentials, revealing that the two-dimensional (2D) molecular assembly and electrochemical activity for dioxygen reduction of the tetraphenylporphyrin derivatives can be tuned by introducing functional groups at the 4 positions of the phenyl moieties, especially iodine substituents.

Mimicking enzymatic active sites on surfaces for energy conversion chemistry

Metal-organic supramolecular chemistry on surfaces has matured to a point where its underlying growth mechanisms are well understood and structures of defined coordination environments of metal atoms can be synthesized in a controlled and reproducible procedure. With surface-confined molecular self-assembly, scientists have a tool box at hand which can be used to prepare structures with desired properties, as for example a defined oxidation number and spin state of the transition metal atoms within the organic matrix. From a structural point of view, these coordination sites in the supramolecular structure resemble the catalytically active sites of metallo-enzymes, both characterized by metal centers coordinated to organic ligands. Several chemical reactions take place at these embedded metal ions in enzymes and the question arises whether these reactions also take place using metal-organic networks as catalysts. Mimicking the active site of metal atoms and organic ligands of enzymes in artificial systems is the key to understanding the selectivity and efficiency of enzymatic reactions. Their catalytic activity depends on various parameters including the charge and spin configuration in the metal ion, but also on the organic environment, which can stabilize intermediate reaction products, inhibits catalytic deactivation, and serves mostly as a transport channel for the reactants and products and therefore ensures the selectivity of the enzyme. Charge and spin on the transition metal in enzymes depend on the one hand on the specific metal element, and on the other hand on its organic coordination environment. These two parameters can carefully be adjusted in surface confined metal-organic networks, which can be synthesized by virtue of combinatorial mixing of building synthons. Different organic ligands with varying functional groups can be combined with several transition metals and spontaneously assemble into ordered networks. The catalytically active metal centers are adequately separated by the linking molecules and constitute promising candiates for heterogeneous catalysts. Recent advances in synthesis, characterization, and catalytic performance of metal-organic networks are highlighted in this Account. Experimental results like structure determination of the networks, charge and spin distribution in the metal centers, and catalytic mechanisms for electrochemical reactions are presented. In particular, we describe the activity of two networks for the oxygen reduction reaction in a combined scanning tunneling microscopy and electrochemical study. The similarities and differences of the networks compared to metallo-enzymes will be discussed, such as the metal surface that operates as a geometric template and concomitantly functions as an electron reservoir, and how this leads to a new class of bioinspired catalysts. The possibility to create functional two-dimensional coordination complexes at surfaces taking inspiration from nature opens up a new route for the design of potent nanocatalyst materials for energy conversion.

A single molecule level study of the temperature-dependent kinetics for the formation of metal porphyrin monolayers on Au(111) from solution

Scanning tunneling microscopy was used to make the first molecular scale measurements of the temperature dependence of composition of an adlayer at the solution-solid interface. We conclusively demonstrate that metal porphyrins adsorb very strongly on Au(111) at the solution solid interface such that the monolayer composition is entirely kinetically controlled below about 100 °C. The barrier for desorption is so great in fact that a temperature of 135 °C is required to induce desorption over a period of hours. Moreover, cobalt(II) octaethylporphyrin (CoOEP) and NiOEP desorb at different rates from different sites on the surface. We have measured the rate constant for desorption of CoOEP into phenyloctane to be 6.7 × 10(-5)/s at 135 °C. On the basis of these measurements, an upper bound can be set for the desorption rate of NiOEP into phenyloctane as 6.7 × 10(-4)/s at 135 °C. For solutions of the order of 100 μM in NiOEP or CoOEP, a dense monolayer is formed within seconds, and the adsorption rate constants fall within 40% of each other. The structures of NiOEP and CoOEP monolayers are essentially identical, and the molecular spacing for both can be described by A = 1.42 ± 0.02 nm, B = 1.32 ± 0.02 nm, and α = 57° ± 2°. The solubility of CoOEP and NiOEP in phenyloctane at room temperature was measured to be 0.228 and 0.319 g/L, respectively.

Effect of dispersion on surface interactions of cobalt(ii) octaethylporphyrin monolayer on Au(111) and HOPG(0001) substrates: a comparative first principles study

Implication of dispersion interactions on geometric, adsorption and electronic properties of porphyrin monolayer on conductive surfaces using density functional theory.

Advances in supramolecularly assembled nanostructures of fullerenes and porphyrins at surfaces

The ‘bottom-up’ strategy is an attractive and promising approach for the construction of nanoarchitectures. Supramolecular assemblies based on non-covalent interactions have been explored in an attempt to control surface properties. In this minireview, we focus on advances made in the past three years in the field of scanning tunneling microscopy (STM) on supramolecular assembly and the function of porphyrins, phthalocyanines, and fullerenes, non-covalently bound on metal single crystal surfaces. Well-defined adlayers, consisting of porphyrin and phthalocyanine for the design of supramolecular nanoarchitectures, supramolecular traps of C 60 on hydrogen bond networks, a unique approach for controlling molecular orientation by a 1:1 supramolecularly assembled film consisting of C 60 and the related derivatives and metallooctaethylporphyrins, and nanoapplications of fullerenes, either induced by tip manipulation or driven by thermal fluctuations at surfaces, were clearly visualized by STM.

Understanding the interaction of the porphyrin macrocycle to reactive metal substrates: structure, bonding, and adatom capture

We investigate the adsorption and conformation of free-base porphines on Cu(110) using STM, reflection absorption infrared spectroscopy, and periodic DFT calculations in order to understand how the central polypyrrole macrocycle, common to all porphyrins, interacts with a reactive metal surface. We find that the macrocycle forms a chemisorption bond with the surface, arising from electron donation into down-shifted and nearly degenerate unoccupied porphine π-orbitals accompanied with electron back-donation from molecular π-orbitals. Our calculations show that van der Waals interactions give rise to an overall increase in the adsorption energy but only minor changes in the adsorption geometry and electronic structure. In addition, we observe copper adatoms being weakly attracted to adsorbed porphines at specific molecular sites. These results provide important insights into porphyrin-surface interactions that, ultimately, will govern the design of robust surface-mounted molecular devices based on this important class of molecules.

Detection of hydrogen peroxide produced during the oxygen reduction reaction at self-assembled thiol-porphyrin monolayers on gold using SECM and nanoelectrodes

Porphyrin molecules were immobilized on polycrystalline gold and glassy carbon by coordinating cobalt(II) 5,10,15,20-tetraphenyl-21H,23H-porphine to a 4-aminothiophenol self-assembled monolayer. The resulting electrocatalytic activity of the metalloporphyrin-modified substrates with regard to the oxygen reduction reaction was characterized by means of cyclic voltammetry and scanning electrochemical microscopy (SECM) using nanoelectrodes of well-defined geometry. From substrate generation tip collection (SG-TC) mode SECM measurements performed under steady-state conditions and at different applied substrate potentials, it is possible to extract kinetic information relevant to electrocatalyst substrates such as metalloporphyrin-modified gold and glassy-carbon electrodes. Such an approach allows for the isolation of the unique contribution of the electrocatalyst to the oxygen reduction reaction and peroxide formation.

Oxygenation of cobalt porphyrinates: coordination or oxidation?

The X-ray characterization of the five-coordinate picket-fence porphyrin complex, [Co(TpivPP)(2-MeHIm)], is reported. The complex has the displacement of cobalt from the porphyrin plane = 0.15 A, and Co-N(Im) = 2.145(3) and (Co-N(p))(av) = 1.979(3) A. This five-coordinate complex, in the presence of dioxygen and excess 2-methylimidazole, undergoes an unanticipated, photoinitiated atropisomerization of the porphyrin ligand, oxidation of cobalt(II), and the formation of the neutral cobalt(III) complex [Co(alpha,alpha,beta,beta-TpivPP)(2-MeHIm)(2-MeIm(-)]. Two distinct examples of this complex have been structurally characterized, and both have structural parameters consistent with cobalt(III). The two new Co(III) porphyrin complexes have axial Co-N(Im) distances ranging from 1.952 to 1.972 A, but which allow for the distinction between imidazole and imidazolate. An interesting intermolecular hydrogen bonding network is observed that leads to infinite helical chains. UV-vis spectroscopic study suggests that [Co(TpivPP)(2-MeHIm)(O(2))] is an intermediate state for the oxidation reaction and that the atropisomerization process is photocatalyzed. A reaction route is proposed based on the spectroscopic studies.