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McHale CM, Karas LJ, Wang X, Wu JI, Miljanić OŠ. Cyclobenzoin Esters as Hosts for Thin Guests. Org Lett 2021; 23:2253-2257. [PMID: 33635676 DOI: 10.1021/acs.orglett.1c00383] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Cyclotetrabenzoin esters can host terminal triple bonds of alkynes and nitriles in their cavities, as revealed by cocrystal structures of four such complexes. Within cyclotetrabenzoin cavities, π-clouds of triple bonds establish favorable and virtually equidistant interactions with the four aromatic walls of the cyclotetrabenzoin skeleton. Binding is selective for aliphatic nitriles and terminal alkynes, with their aromatic counterparts residing outside of the cyclotetrabenzoin cavity.
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Affiliation(s)
- Corie M McHale
- Department of Chemistry, University of Houston, 3585 Cullen Boulevard #112, Houston, Texas 77204-5003, United States
| | - Lucas J Karas
- Department of Chemistry, University of Houston, 3585 Cullen Boulevard #112, Houston, Texas 77204-5003, United States
| | - Xiqu Wang
- Department of Chemistry, University of Houston, 3585 Cullen Boulevard #112, Houston, Texas 77204-5003, United States
| | - Judy I Wu
- Department of Chemistry, University of Houston, 3585 Cullen Boulevard #112, Houston, Texas 77204-5003, United States
| | - Ognjen Š Miljanić
- Department of Chemistry, University of Houston, 3585 Cullen Boulevard #112, Houston, Texas 77204-5003, United States
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2
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Sa'adeh H, Backler F, Wang F, Piccirillo S, Ciavardini A, Richter R, Coreno M, Prince KC. Experimental and Theoretical Soft X-ray Study of Nicotine and Related Compounds. J Phys Chem A 2020; 124:4025-4035. [PMID: 32336097 DOI: 10.1021/acs.jpca.9b11586] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The valence and core electronic structure of nicotine, nicotinic acid, and nicotinamide have been studied by photoelectron and soft X-ray absorption spectroscopy, supported by theoretical calculations, which take into account conformational isomerism. The core-level photoionization spectra of all molecules have been assigned, and theory indicates that the effects of conformational differences are small, generally less than the natural line widths of the core ionic states. However, in the case of nicotinamide, the theoretical valence ionization potentials of cis and trans conformers differ significantly in the outer valence space, and the experimental spectrum is in agreement with the calculated outer valence cis conformer spectrum. In addition, the C, N, and O K edge near-edge absorption fine structure spectra are reported and interpreted by comparison with reference compounds. We find evidence at the N and O K edges of interaction between the delocalized orbitals of the pyridine ring and the substituents for nicotinic acid and nicotinamide. The strength of the interaction varies because the first is planar, while the second is twisted, reducing the extent of orbital mixing.
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Affiliation(s)
- Hanan Sa'adeh
- Department of Physics, The University of Jordan, 11942 Amman, Jordan.,Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Frederick Backler
- Centre for Translational Atomaterials and Department of Chemistry and Biotechnology, Swinburne University of Technology, Melbourne, Victoria 3122, Australia
| | - Feng Wang
- Centre for Translational Atomaterials and Department of Chemistry and Biotechnology, Swinburne University of Technology, Melbourne, Victoria 3122, Australia
| | - Susanna Piccirillo
- Dipartimento di Scienze e Tecnologie Chimiche, Università di Roma "Tor Vergata", 00133 Rome, Italy
| | | | - Robert Richter
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Marcello Coreno
- ISM-CNR, in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Kevin C Prince
- Elettra Sincrotrone Trieste, in Area Science Park, 34149 Basovizza, Trieste, Italy.,Centre for Translational Atomaterials and Department of Chemistry and Biotechnology, Swinburne University of Technology, Melbourne, Victoria 3122, Australia
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Deeper Insights into Conformational Analysis of cis-Butene and 1-Alkenes as Monomers and Dimers: QTAIM, NCI, and DFT Approach. J CHEM-NY 2019. [DOI: 10.1155/2019/2365915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
A few theoretical and experimental studies have been done so far about the properties and the conformational analysis of alkenes as monomers and dimers. Deeper insights into the conformational analysis of monomers and dimers of alkenes and the relation with boiling point are done in this work. In low-lying cis-butene, there is no repulsive interaction between methyl groups but there is an attractive hydrogen-hydrogen bonding. In monomers of 1-alkenes, the most stable conformer has bent-inward geometry which favors the π bond interaction with methyl/methylene hydrogen/carbon atoms. Conversely, each alkene’s molecule in the corresponding most stable alkene’s dimer has a straight, zig-zag geometry. Two straight, zig-zag alkene’s molecules in the corresponding most stable dimer have only one type of intermolecular interaction (hydrogen-hydrogen bonding). As a consequence, very good linear relationships between a physical property (such as boiling point) and theoretical parameters are obtained.
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Anufriev SA, Sivaev IB, Suponitsky KY, Godovikov IA, Bregadze VI. Synthesis of 10-Methylsulfide and 10-Alkylmethylsulfoniumnido-Carborane Derivatives: B-H···π Interactions between the B-H-B Hydrogen Atom and Alkyne Group in 10-RC≡CCH2S(Me)-7,8-C2B9H11. Eur J Inorg Chem 2017. [DOI: 10.1002/ejic.201700785] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Sergey A. Anufriev
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Igor B. Sivaev
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Kyrill Yu. Suponitsky
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Ivan A. Godovikov
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Vladimir I. Bregadze
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
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Zahl MG, Fossheim R, Børve KJ, Sæthre LJ, Thomas TD. Electronic Properties of Chlorine, Methyl, and Chloromethyl as Substituents to the Ethylene Group--Viewed from the Core of Carbon. J Phys Chem A 2015; 119:9481-93. [PMID: 26280174 DOI: 10.1021/acs.jpca.5b05494] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
"Substituent effects" is an important and useful concept in organic chemistry. Although there are many approaches to parametrizing the electronic and steric effects of substituents, the physical basis for the parameters is often unclear. The purpose of the present work is to explore the properties of chemical shifts in carbon 1s energies as a well-defined basis for characterizing substituents to an ethylene C═C moiety. To this end, high-resolution carbon 1s photoelectron spectra of six chloro-substituted ethenes and seven chloro-substituted propenes have been measured in the gas phase. Site-specific adiabatic ionization energies have been determined from the spectra using theoretical ab initio calculations to predict the vibrational structures. For two molecules, 3-chloropropene and 2,3-dichloropropene, the spectral analyses give quantitative results for the conformer populations. The observed shifts have been analyzed in terms of initial-state (potential) and relaxation effects, and charge relaxation has also been analyzed by means of natural resonance theory. On the basis of core-level spectroscopy and models, chlorine, methyl, and chloromethyl have been characterized in terms of their effect on the carbon to which they are attached (α site) as well as the neighboring sp(2) carbon (β site). The derived spectroscopic substituent parameters are characterized by both inductive (electronegativity) effects and the ability of each substituent to engage in electron delocalization via the π system. Moreover, the adopted approach is extended to include substituent-substituent interaction parameters.
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Affiliation(s)
- Maria G Zahl
- Department of Chemistry, University of Bergen , NO-5007 Bergen, Norway
| | - Randi Fossheim
- Department of Chemistry, University of Bergen , NO-5007 Bergen, Norway
| | - Knut J Børve
- Department of Chemistry, University of Bergen , NO-5007 Bergen, Norway
| | - Leif J Sæthre
- Department of Chemistry, University of Bergen , NO-5007 Bergen, Norway
| | - T Darrah Thomas
- Department of Chemistry, Oregon State University , Corvallis, Oregon 97331, United States
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