1
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Faries KM, Hanson DK, Buhrmaster JC, Hippleheuser S, Tira GA, Wyllie RM, Kohout CE, Magdaong NCM, Holten D, Laible PD, Kirmaier C. Two pathways to understanding electron transfer in reaction centers from photosynthetic bacteria: A comparison of Rhodobacter sphaeroides and Rhodobacter capsulatus mutants. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2024; 1865:149047. [PMID: 38692451 DOI: 10.1016/j.bbabio.2024.149047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 04/23/2024] [Accepted: 04/24/2024] [Indexed: 05/03/2024]
Abstract
The rates, yields, mechanisms and directionality of electron transfer (ET) are explored in twelve pairs of Rhodobacter (R.) sphaeroides and R. capsulatus mutant RCs designed to defeat ET from the excited primary donor (P*) to the A-side cofactors and re-direct ET to the normally inactive mirror-image B-side cofactors. In general, the R. sphaeroides variants have larger P+HB- yields (up to ∼90%) than their R. capsulatus analogs (up to ∼60%), where HB is the B-side bacteriopheophytin. Substitution of Tyr for Phe at L-polypeptide position L181 near BB primarily increases the contribution of fast P* → P+BB- → P+HB- two-step ET, where BB is the "bridging" B-side bacteriochlorophyll. The second step (∼6-8 ps) is slower than the first (∼3-4 ps), unlike A-side two-step ET (P* → P+BA- → P+HA-) where the second step (∼1 ps) is faster than the first (∼3-4 ps) in the native RC. Substitutions near HB, at L185 (Leu, Trp or Arg) and at M-polypeptide site M133/131 (Thr, Val or Glu), strongly affect the contribution of slower (20-50 ps) P* → P+HB- one-step superexchange ET. Both ET mechanisms are effective in directing electrons "the wrong way" to HB and both compete with internal conversion of P* to the ground state (∼200 ps) and ET to the A-side cofactors. Collectively, the work demonstrates cooperative amino-acid control of rates, yields and mechanisms of ET in bacterial RCs and how A- vs. B-side charge separation can be tuned in both species.
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Affiliation(s)
- Kaitlyn M Faries
- Department of Chemistry, Washington University, St. Louis, MO 63130, United States of America
| | - Deborah K Hanson
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - James C Buhrmaster
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Stephen Hippleheuser
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Gregory A Tira
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Ryan M Wyllie
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Claire E Kohout
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Nikki Cecil M Magdaong
- Department of Chemistry, Washington University, St. Louis, MO 63130, United States of America
| | - Dewey Holten
- Department of Chemistry, Washington University, St. Louis, MO 63130, United States of America
| | - Philip D Laible
- Biosciences Division, Argonne National Laboratory, Lemont, IL 60439, United States of America
| | - Christine Kirmaier
- Department of Chemistry, Washington University, St. Louis, MO 63130, United States of America.
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2
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Pudlák M, Pinčák R, Bartoš E. Effect of vibrational modes on electron transfer directionality: Photosynthetic reaction centers. Phys Rev E 2022; 105:064408. [PMID: 35854547 DOI: 10.1103/physreve.105.064408] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Accepted: 05/25/2022] [Indexed: 06/15/2023]
Abstract
It is shown in the example of the photosynthetic reaction centers (RCs) that the electron transfer can be directed by vibrational modes into the needed site where it is localized. In the case of the RC, it is the low vibrational mode that produces such an effect. We find that the electron transfer unidirectionality in the photosynthetic reaction center can be determined by the asymmetry in the reorganization energy of the vibrational modes at high temperatures. We also numerically solve generalized master equations for various vibration relaxation times. The results are compared with the solution of master equations. It is shown that for small relaxation times, the non-Markovian electron transfer kinetics gives similar results as the Markovian approximation, but the results are significantly different for the long vibration relaxation times.
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Affiliation(s)
- Michal Pudlák
- Institute of Experimental Physics, Slovak Academy of Sciences, Watsonova 47, 043 53 Košice, Slovak Republic
| | - Richard Pinčák
- Institute of Experimental Physics, Slovak Academy of Sciences, Watsonova 47, 043 53 Košice, Slovak Republic
| | - Erik Bartoš
- Institute of Physics, Slovak Academy of Sciences, Dúbravská Cesta 9, 845 11 Bratislava, Slovak Republic
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3
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Acquirement of water-splitting ability and alteration of the charge-separation mechanism in photosynthetic reaction centers. Proc Natl Acad Sci U S A 2020; 117:16373-16382. [PMID: 32601233 PMCID: PMC7368266 DOI: 10.1073/pnas.2000895117] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
In photosynthetic reaction centers from purple bacteria (PbRC) and the water-oxidizing enzyme, photosystem II (PSII), charge separation occurs along one of the two symmetrical electron-transfer branches. Here we report the microscopic origin of the unidirectional charge separation, fully considering electron-hole interaction, electronic coupling of the pigments, and electrostatic interaction with the polarizable entire protein environments. The electronic coupling between the pair of bacteriochlorophylls is large in PbRC, forming a delocalized excited state with the lowest excitation energy (i.e., the special pair). The charge-separated state in the active branch is stabilized by uncharged polar residues in the transmembrane region and charged residues on the cytochrome c 2 binding surface. In contrast, the accessory chlorophyll in the D1 protein (ChlD1) has the lowest excitation energy in PSII. The charge-separated state involves ChlD1 •+ and is stabilized predominantly by charged residues near the Mn4CaO5 cluster and the proceeding proton-transfer pathway. It seems likely that the acquirement of water-splitting ability makes ChlD1 the initial electron donor in PSII.
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4
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Engineering opposite electronic polarization of singlet and triplet states increases the yield of high-energy photoproducts. Proc Natl Acad Sci U S A 2019; 116:14465-14470. [PMID: 31182609 DOI: 10.1073/pnas.1901752116] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Efficient photosynthetic energy conversion requires quantitative, light-driven formation of high-energy, charge-separated states. However, energies of high-lying excited states are rarely extracted, in part because the congested density of states in the excited-state manifold leads to rapid deactivation. Conventional photosystem designs promote electron transfer (ET) by polarizing excited donor electron density toward the acceptor ("one-way" ET), a form of positive design. Curiously, negative design strategies that explicitly avoid unwanted side reactions have been underexplored. We report here that electronic polarization of a molecular chromophore can be used as both a positive and negative design element in a light-driven reaction. Intriguingly, prudent engineering of polarized excited states can steer a "U-turn" ET-where the excited electron density of the donor is initially pushed away from the acceptor-to outcompete a conventional one-way ET scheme. We directly compare one-way vs. U-turn ET strategies via a linked donor-acceptor (DA) assembly in which selective optical excitation produces donor excited states polarized either toward or away from the acceptor. Ultrafast spectroscopy of DA pinpoints the importance of realizing donor singlet and triplet excited states that have opposite electronic polarizations to shut down intersystem crossing. These results demonstrate that oppositely polarized electronically excited states can be employed to steer photoexcited states toward useful, high-energy products by routing these excited states away from states that are photosynthetic dead ends.
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5
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McCleese C, Yu Z, Esemoto NN, Kolodziej C, Maiti B, Bhandari S, Dunietz BD, Burda C, Ptaszek M. Excitonic Interactions in Bacteriochlorin Homo-Dyads Enable Charge Transfer: A New Approach to the Artificial Photosynthetic Special Pair. J Phys Chem B 2018. [PMID: 29526105 DOI: 10.1021/acs.jpcb.8b02123] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Excitonically coupled bacteriochlorin (BC) dimers constitute a primary electron donor (special pair) in bacterial photosynthesis and absorbing units in light-harvesting antenna. However, the exact nature of the excited state of these dyads is still not fully understood. Here, we report a detailed spectroscopic and computational investigation of a series of symmetrical bacteriochlorin dimers, where the bacteriochlorins are connected either directly or by a phenylene bridge of variable length. The excited state of these dyads is quenched in high-dielectric solvents, which we attribute to photoinduced charge transfer. The mixing of charge transfer with the excitonic state causes accelerated (within 41 ps) decay of the excited state for the directly linked dyad, which is reduced by orders of magnitude with each additional phenyl ring separating the bacteriochlorins. These results highlight the origins of the excited-state dynamics in symmetric BC dyads and provide a new model for studying the primary processes in photosynthesis and for the development of artificial, biomimetic systems for solar energy conversion.
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Affiliation(s)
- Christopher McCleese
- Department of Chemistry , Case Western Reserve University , Cleveland , Ohio 44106 , United States
| | - Zhanqian Yu
- Department of Chemistry and Biochemistry , University of Maryland , Baltimore County, Baltimore , Maryland 21250 , United States
| | - Nopondo N Esemoto
- Department of Chemistry and Biochemistry , University of Maryland , Baltimore County, Baltimore , Maryland 21250 , United States
| | - Charles Kolodziej
- Department of Chemistry , Case Western Reserve University , Cleveland , Ohio 44106 , United States
| | - Buddhadev Maiti
- Department of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States
| | - Srijana Bhandari
- Department of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry , Kent State University , Kent , Ohio 44242 , United States
| | - Clemens Burda
- Department of Chemistry , Case Western Reserve University , Cleveland , Ohio 44106 , United States
| | - Marcin Ptaszek
- Department of Chemistry and Biochemistry , University of Maryland , Baltimore County, Baltimore , Maryland 21250 , United States
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6
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Zheng F, Jin M, Mančal T, Zhao Y. Study of Electronic Structures and Pigment–Protein Interactions in the Reaction Center of Thermochromatium tepidum with a Dynamic Environment. J Phys Chem B 2016; 120:10046-10058. [DOI: 10.1021/acs.jpcb.6b06628] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Fulu Zheng
- Division
of Materials Science, Nanyang Technological University, Singapore 639798, Singapore
| | - Mengting Jin
- Division
of Materials Science, Nanyang Technological University, Singapore 639798, Singapore
| | - Tomáš Mančal
- Faculty
of Mathematics and Physics, Charles University in Prague, Ke Karlovu
5, 121 16 Prague
2, Czech Republic
| | - Yang Zhao
- Division
of Materials Science, Nanyang Technological University, Singapore 639798, Singapore
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7
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Wu Y, Young RM, Frasconi M, Schneebeli ST, Spenst P, Gardner DM, Brown KE, Würthner F, Stoddart JF, Wasielewski MR. Ultrafast Photoinduced Symmetry-Breaking Charge Separation and Electron Sharing in Perylenediimide Molecular Triangles. J Am Chem Soc 2015; 137:13236-9. [PMID: 26418462 DOI: 10.1021/jacs.5b08386] [Citation(s) in RCA: 108] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report on a visible-light-absorbing chiral molecular triangle composed of three covalently linked 1,6,7,12-tetra(phenoxy)perylene-3,4:9,10-bis(dicarboximide) (PDI) units. The rigid triangular architecture reduces the electronic coupling between the PDIs, so ultrafast symmetry-breaking charge separation is kinetically favored over intramolecular excimer formation, as revealed by femtosecond transient absorption spectroscopy. Photoexcitation of the PDI triangle dissolved in CH2Cl2 gives PDI(+•)-PDI(-•) in τCS = 12.0 ± 0.2 ps. Fast subsequent intramolecular electron/hole hopping can equilibrate the six possible energetically degenerate ion-pair states, as suggested by electron paramagnetic resonance/electron-nuclear double resonance spectroscopy, which shows that one-electron reduction of the PDI triangle results in complete electron sharing among the three PDIs. Charge recombination of PDI(+•)-PDI(-•) to the ground state occurs in τCR = 1.12 ± 0.01 ns with no evidence of triplet excited state formation.
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Affiliation(s)
| | | | | | | | - Peter Spenst
- Institut für Organische Chemie and Center for Nanosystems Chemistry, Universität Würzburg , Am Hubland, 97074 Würzburg, Germany
| | | | | | - Frank Würthner
- Institut für Organische Chemie and Center for Nanosystems Chemistry, Universität Würzburg , Am Hubland, 97074 Würzburg, Germany
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8
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Kamran M, Friebe VM, Delgado JD, Aartsma TJ, Frese RN, Jones MR. Demonstration of asymmetric electron conduction in pseudosymmetrical photosynthetic reaction centre proteins in an electrical circuit. Nat Commun 2015; 6:6530. [PMID: 25751412 PMCID: PMC4366537 DOI: 10.1038/ncomms7530] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2014] [Accepted: 02/04/2015] [Indexed: 12/22/2022] Open
Abstract
Photosynthetic reaction centres show promise for biomolecular electronics as nanoscale solar-powered batteries and molecular diodes that are amenable to atomic-level re-engineering. In this work the mechanism of electron conduction across the highly tractable Rhodobacter sphaeroides reaction centre is characterized by conductive atomic force microscopy. We find, using engineered proteins of known structure, that only one of the two cofactor wires connecting the positive and negative termini of this reaction centre is capable of conducting unidirectional current under a suitably oriented bias, irrespective of the magnitude of the bias or the applied force at the tunnelling junction. This behaviour, strong functional asymmetry in a largely symmetrical protein–cofactor matrix, recapitulates the strong functional asymmetry characteristic of natural photochemical charge separation, but it is surprising given that the stimulus for electron flow is simply an externally applied bias. Reasons for the electrical resistance displayed by the so-called B-wire of cofactors are explored. Photosynthetic reaction centres have been proposed for applications in bioelectronics. Here, the authors examine electron transport through the reaction centre from R. sphaeroides using conductive AFM, observing asymmetric conductance along only one cofactor wire under an applied bias.
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Affiliation(s)
- Muhammad Kamran
- Leiden Institute of Physics, Leiden University, Niels Bohrweg 2, 2333 CA Leiden, The Netherlands
| | - Vincent M Friebe
- Department of Physics and Astronomy, LaserLaB Amsterdam, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Juan D Delgado
- Department of Physics and Astronomy, LaserLaB Amsterdam, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Thijs J Aartsma
- Leiden Institute of Physics, Leiden University, Niels Bohrweg 2, 2333 CA Leiden, The Netherlands
| | - Raoul N Frese
- Department of Physics and Astronomy, LaserLaB Amsterdam, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Michael R Jones
- School of Biochemistry, University of Bristol, Medical Sciences Building, University Walk, Bristol BS8 1TD, UK
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9
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Saggu M, Carter B, Zhou X, Faries K, Cegelski L, Holten D, Boxer SG, Kirmaier C. Putative hydrogen bond to tyrosine M208 in photosynthetic reaction centers from Rhodobacter capsulatus significantly slows primary charge separation. J Phys Chem B 2014; 118:6721-32. [PMID: 24902471 PMCID: PMC4064694 DOI: 10.1021/jp503422c] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
![]()
Slow, ∼50
ps, P* → P+HA– electron
transfer is observed in Rhodobacter
capsulatus reaction centers (RCs) bearing the native
Tyr residue at M208 and the single amino acid change of isoleucine
at M204 to glutamic acid. The P* decay kinetics are unusually homogeneous
(single exponential) at room temperature. Comparative solid-state
NMR of [4′-13C]Tyr labeled wild-type and M204E RCs
show that the chemical shift of Tyr M208 is significantly altered
in the M204E mutant and in a manner consistent with formation of a
hydrogen bond to the Tyr M208 hydroxyl group. Models based on RC crystal
structure coordinates indicate that if such a hydrogen bond is formed
between the Glu at M204 and the M208 Tyr hydroxyl group, the −OH
would be oriented in a fashion expected (based on the calculations
by Alden et al., J. Phys. Chem.1996, 100, 16761–16770) to destabilize P+BA– in free energy. Alteration
of the environment of Tyr M208 and BA by Glu M204 via this
putative hydrogen bond has a powerful influence on primary charge
separation.
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Affiliation(s)
- Miguel Saggu
- Department of Chemistry, Stanford University , Stanford, California 94305-5012, United States
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