1
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Lang J, Foley CD, Thawoos S, Behzadfar A, Liu Y, Zádor J, Suits AG. Reaction dynamics of S( 3P) with 1,3-butadiene and isoprene: crossed-beam scattering, low-temperature flow experiments, and high-level electronic structure calculations. Faraday Discuss 2024. [PMID: 38807494 DOI: 10.1039/d4fd00009a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2024]
Abstract
Sulfur atoms serve as key players in diverse chemical processes, from astrochemistry at very low temperature to combustion at high temperature. Building upon our prior findings, showing cyclization to thiophenes following the reaction of ground-state sulfur atoms with dienes, we here extend this investigation to include many additional reaction products, guided by detailed theoretical predictions. The outcomes highlight the complex formation of products during intersystem crossing (ISC) to the singlet surfaces. Here, we employed crossed-beam velocity map imaging and high-level ab initio methods to explore the reaction of S(3P) with 1,3-butadiene and isoprene under single-collision conditions and in low-temperature flows. For the butadiene reaction, our experimental results show the formation of thiophene via H2 loss, a 2H-thiophenyl radical through H loss, and thioketene through ethene loss at a slightly higher collision energy compared to previous observations. Complementary Chirped-Pulse Fourier-Transform mmWave spectroscopy (CP-FTmmW) measurements in a uniform flow confirmed the formation of thioketene in the reaction at 20 K. For the isoprene reaction, we observed analogous products along with the 2H-thiophenyl radical arising from methyl loss and C3H4S (loss of ethene or H2 + acetylene). CP-FTmmW detected the formation of thioformaldehyde via loss of 1,3-butadiene, again in the 20 K flow. Coupled-cluster calculations on the pathways found by the automated kinetic workflow code KinBot support these findings and indicate ISC to the singlet surface, leading to the generation of various long-lived intermediates, including 5-membered heterocycles.
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Affiliation(s)
- Jinxin Lang
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
| | - Casey D Foley
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
| | - Shameemah Thawoos
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
| | - Abbas Behzadfar
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
| | - Yanan Liu
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
| | - Judit Zádor
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94551, USA.
| | - Arthur G Suits
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.
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2
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Marchione D, Mancini L, Liang P, Vanuzzo G, Pirani F, Skouteris D, Rosi M, Casavecchia P, Balucani N. Unsaturated Dinitriles Formation Routes in Extraterrestrial Environments: A Combined Experimental and Theoretical Investigation of the Reaction between Cyano Radicals and Cyanoethene (C 2H 3CN). J Phys Chem A 2022; 126:3569-3582. [PMID: 35640168 PMCID: PMC9189926 DOI: 10.1021/acs.jpca.2c01802] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
![]()
The reaction between
cyano radicals (CN, X2Σ+) and cyanoethene
(C2H3CN) has been
investigated by a combined approach coupling crossed molecular beam
(CMB) experiments with mass spectrometric detection and time-of-flight
analysis at a collision energy of 44.6 kJ mol–1 and
electronic structure calculations to determine the relevant potential
energy surface. The experimental results can be interpreted by assuming
the occurrence of a dominant reaction pathway leading to the two but-2-enedinitrile
(1,2-dicyanothene) isomers (E- and Z-NC–CH=CH–CN) in a H-displacement channel and,
to a much minor extent, to 1,1-dicyanoethene, CH2C(CN)2. In order to derive the product branching ratios under the
conditions of the CMB experiments and at colder temperatures, including
those relevant to Titan and to cold interstellar clouds, we have carried
out RRKM statistical calculations using the relevant potential energy
surface of the investigated reaction. We have also estimated the rate
coefficient at very low temperatures by employing a semiempirical
method for the treatment of long-range interactions. The reaction
has been found to be barrierless and fast also under the low temperature
conditions of cold interstellar clouds and the atmosphere of Titan.
Astrophysical implications and comparison with literature data are
also presented. On the basis of the present work, 1,2-dicyanothene
and 1,1-dicyanothene are excellent candidates for the search of dinitriles
in the interstellar medium.
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Affiliation(s)
- Demian Marchione
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Luca Mancini
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Pengxiao Liang
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Gianmarco Vanuzzo
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | | | - Marzio Rosi
- Dipartimento di Ingegneria Civile ed Ambientale, Università degli Studi di Perugia, 06125 Perugia, Italy
| | - Piergiorgio Casavecchia
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Nadia Balucani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
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3
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Barnum TJ, Siebert MA, Lee KLK, Loomis RA, Changala PB, Charnley SB, Sita ML, Xue C, Remijan AJ, Burkhardt AM, McGuire BA, Cooke IR. A Search for Heterocycles in GOTHAM Observations of TMC-1. J Phys Chem A 2022; 126:2716-2728. [PMID: 35442689 DOI: 10.1021/acs.jpca.2c01435] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have conducted an extensive search for nitrogen-, oxygen-, and sulfur-bearing heterocycles toward Taurus Molecular Cloud 1 (TMC-1) using the deep, broadband centimeter-wavelength spectral line survey of the region from the GOTHAM large project on the Green Bank Telescope. Despite their ubiquity in terrestrial chemistry, and the confirmed presence of a number of cyclic and polycyclic hydrocarbon species in the source, we find no evidence for the presence of any heterocyclic species. Here, we report the derived upper limits on the column densities of these molecules obtained by Markov Chain Monte Carlo (MCMC) analysis and compare this approach to traditional single-line upper limit measurements. We further hypothesize why these molecules are absent in our data, how they might form in interstellar space, and the nature of observations that would be needed to secure their detection.
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Affiliation(s)
- Timothy J Barnum
- Department of Chemistry, Union College, Schenectady, New York 12308, United States
| | - Mark A Siebert
- Department of Astronomy, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Kin Long Kelvin Lee
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Ryan A Loomis
- National Radio Astronomy Observatory, Charlottesville, Virginia 22903, United States
| | - P Bryan Changala
- Center for Astrophysics
- Harvard & Smithsonian, Cambridge, Massachusetts 02138, United States
| | - Steven B Charnley
- Astrochemistry Laboratory and the Goddard Center for Astrobiology, NASA Goddard Space Flight Center, Greenbelt, Maryland 20771, United States
| | - Madelyn L Sita
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Ci Xue
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Anthony J Remijan
- National Radio Astronomy Observatory, Charlottesville, Virginia 22903, United States
| | - Andrew M Burkhardt
- Department of Physics, Wellesley College, 106 Central Street, Wellesley, Massachusetts 02481, United States
| | - Brett A McGuire
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.,National Radio Astronomy Observatory, Charlottesville, Virginia 22903, United States.,Center for Astrophysics
- Harvard & Smithsonian, Cambridge, Massachusetts 02138, United States
| | - Ilsa R Cooke
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1, Canada
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4
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Salta Z, Segovia ME, Katz A, Tasinato N, Barone V, Ventura ON. Isomerization and Fragmentation Reactions on the [C 2SH 4] Potential Energy Surface: The Metastable Thione S-Methylide Isomer. J Org Chem 2021; 86:2941-2956. [PMID: 33501826 PMCID: PMC8023414 DOI: 10.1021/acs.joc.0c02835] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Thione S-methylide, parent species of the thiocarbonyl ylide family, is a 1,3-dipolar species on the [C2SH4] potential energy surface, not so much studied as its isomers, thiirane, vinyl thiol, and thioacetaldehyde. The conrotatory ring-closure reaction toward thiirane was studied in the 90s, but no complete analysis of the potential energy surface is available. In this paper, we report a computational study of the reaction scheme linking all species. We employed several computational methods (density functional theory, CCSD(T) composite schemes, and CASSCF/CASPT2 multireference procedures) to find the best description of thione S-methylide, its isomers, and transition states. The barrier from thiirane to thione S-methylide amounts to 52.2 kcal mol-1 (against 17.6 kcal mol-1 for the direct one), explaining why thiocarbonyl ylides cannot be prepared from thiiranes. Conversion of thiirane to vinyl thiol implies a large barrier, supporting why the reaction has been observed only at high temperatures. Fragmentations of thiirane to S(3P) or S(1D) and ethylene as well as decomposition to hydrogen sulfide plus acetylene were also explored. Triplet and singlet open-shell species were identified as intermediates in the fragmentations, with energies lower than the transition state between thiirane and vinyl thiol, explaining the preference of the latter at low temperatures.
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Affiliation(s)
- Zoi Salta
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | - Marc E Segovia
- Computational Chemistry and Biology Group, CCBG, DETEMA, Facultad de Química, Universidad de la República, 11400 Montevideo, Uruguay
| | - Aline Katz
- Computational Chemistry and Biology Group, CCBG, DETEMA, Facultad de Química, Universidad de la República, 11400 Montevideo, Uruguay
| | - Nicola Tasinato
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | - Vincenzo Barone
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | - Oscar N Ventura
- Computational Chemistry and Biology Group, CCBG, DETEMA, Facultad de Química, Universidad de la República, 11400 Montevideo, Uruguay
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5
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Rosi M, Skouteris D, Balucani N, Nappi C, Faginas Lago N, Pacifici L, Falcinelli S, Stranges D. An Experimental and Theoretical Investigation of 1-Butanol Pyrolysis. Front Chem 2019; 7:326. [PMID: 31139618 PMCID: PMC6527765 DOI: 10.3389/fchem.2019.00326] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 04/23/2019] [Indexed: 11/17/2022] Open
Abstract
Bioalcohols are a promising family of biofuels. Among them, 1-butanol has a strong potential as a substitute for petrol. In this manuscript, we report on a theoretical and experimental characterization of 1-butanol thermal decomposition, a very important process in the 1-butanol combustion at high temperatures. Advantage has been taken of a flash pyrolysis experimental set-up with mass spectrometric detection, in which the brief residence time of the pyrolyzing mixture inside a short, resistively heated SiC tube allows the identification of the primary products of the decomposing species, limiting secondary processes. Dedicated electronic structure calculations of the relevant potential energy surface have also been performed and RRKM estimates of the rate coefficients and product branching ratios up to 2,000 K are provided. Both electronic structure and RRKM calculations are in line with previous determinations. According to the present study, the H2O elimination channel leading to 1-butene is more important than previously believed. In addition to that, we provide experimental evidence that butanal formation by H2 elimination is not a primary decomposition route. Finally, we have experimental evidence of a small yield of the CH3 elimination channel.
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Affiliation(s)
- Marzio Rosi
- Department of Civil and Environmental Engineering, University of Perugia, Perugia, Italy
| | | | - Nadia Balucani
- Laboratory of Molecular Processes in Combustion, Department of Chemistry, Biology and Biotechnologies, University of Perugia, Perugia, Italy
| | - Caterina Nappi
- Laboratory of Molecular Processes in Combustion, Department of Chemistry, Biology and Biotechnologies, University of Perugia, Perugia, Italy
| | - Noelia Faginas Lago
- Laboratory of Molecular Processes in Combustion, Department of Chemistry, Biology and Biotechnologies, University of Perugia, Perugia, Italy
| | - Leonardo Pacifici
- Master-Up, Perugia, Italy.,Laboratory of Molecular Processes in Combustion, Department of Chemistry, Biology and Biotechnologies, University of Perugia, Perugia, Italy
| | - Stefano Falcinelli
- Department of Civil and Environmental Engineering, University of Perugia, Perugia, Italy
| | - Domenico Stranges
- Department of Chemistry, University of Rome "La Sapienza", Rome, Italy
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6
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Rosi M, Mancini L, Skouteris D, Ceccarelli C, Faginas Lago N, Podio L, Codella C, Lefloch B, Balucani N. Possible scenarios for SiS formation in the interstellar medium: Electronic structure calculations of the potential energy surfaces for the reactions of the SiH radical with atomic sulphur and S2. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2018.01.053] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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7
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Sleiman C, El Dib G, Rosi M, Skouteris D, Balucani N, Canosa A. Low temperature kinetics and theoretical studies of the reaction CN + CH 3NH 2: a potential source of cyanamide and methyl cyanamide in the interstellar medium. Phys Chem Chem Phys 2018; 20:5478-5489. [PMID: 29082409 DOI: 10.1039/c7cp05746f] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The reaction between cyano radicals (which are ubiquitous in interstellar clouds) and methylamine (a molecule detected in various interstellar sources) has been investigated in a synergistic experimental and theoretical study. The reaction has been found to be very fast in the entire range of temperatures investigated (23-297 K) by using a CRESU apparatus coupled to pulsed laser photolysis - laser induced fluorescence. The global experimental rate coefficient is given by In addition, dedicated electronic structure calculations of the underlying potential energy surface have been performed, together with capture theory and RRKM calculations. The experimental data have been interpreted in the light of the theoretical calculations and the product branching ratio has been established. According to the present study, in the range of temperatures investigated the title reaction is an efficient interstellar route of formation of cyanamide, NH2CN, another interstellar species. The second most important channel is the one leading to methyl cyanamide, CH3NHCN (an isomer of aminoacetonitrile), via a CN/H exchange mechanism with a yield of 12% of the global reaction in the entire range of temperatures explored. For a possible inclusion in future astrochemical models we suggest, by referring to the usual expression the following values: α = 3.68 × 10-12 cm3 molec-1 s-1, β = -1.80, γ = 7.79 K for the channel leading to NH2CN + CH3; α = 5.05 × 10-13 cm3 molec-1 s-1, β = -1.82, γ = 7.93 K for the channel leading to CH3NHCN + H.
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Affiliation(s)
- Chantal Sleiman
- Institut de Physique de Rennes, UMR 6251 du CNRS - Université de Rennes 1, Bat. 11C, Campus de Beaulieu, 263 Avenue du Général Leclerc, F-35042 Rennes Cedex, France.
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8
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Potapov A, Canosa A, Jiménez E, Rowe B. Chemie mit Überschall: 30 Jahre astrochemische Forschung und künftige Herausforderungen. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Alexey Potapov
- Laborastrophysikgruppe des Max-Planck-Instituts für Astronomie am Institut für Festkörperphysik; Friedrich-Schiller-Universität Jena; Helmholtzweg 3 07743 Jena Deutschland
| | - André Canosa
- Département de Physique Moléculaire; Institut de Physique de Rennes, UMR CNRS-UR1 6251, Université de Rennes 1, Campus de Beaulieu; 263 Avenue du Général Leclerc 35042 Rennes Cedex Frankreich
| | - Elena Jiménez
- Departamento de Química Física, Facultad de Ciencias y Tecnologías Químicas; Universidad de Castilla-La Mancha; Avda. Camilo José Cela, 1B 13071 Ciudad Real Spanien
| | - Bertrand Rowe
- Rowe-consulting, 22 Chemin des Moines; 22750 Saint Jacut de la Mer Frankreich
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9
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Potapov A, Canosa A, Jiménez E, Rowe B. Uniform Supersonic Chemical Reactors: 30 Years of Astrochemical History and Future Challenges. Angew Chem Int Ed Engl 2017; 56:8618-8640. [DOI: 10.1002/anie.201611240] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Revised: 01/27/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Alexey Potapov
- Laborastrophysikgruppe des Max-Planck-Instituts für Astronomie am Institut für Festkörperphysik; Friedrich-Schiller-Universität Jena; Helmholtzweg 3 07743 Jena Germany
| | - André Canosa
- Département de Physique Moléculaire; Institut de Physique de Rennes, UMR CNRS-UR1 6251, Université de Rennes 1, Campus de Beaulieu; 263 Avenue du Général Leclerc 35042 Rennes Cedex France
| | - Elena Jiménez
- Departamento de Química Física, Facultad de Ciencias y Tecnologías Químicas; Universidad de Castilla-La Mancha; Avda. Camilo José Cela, 1B 13071 Ciudad Real Spain
| | - Bertrand Rowe
- Rowe-consulting, 22 Chemin des Moines; 22750 Saint Jacut de la Mer France
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10
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Kaiser RI, Balucani N. Exploring the Gas Phase Synthesis of the Elusive Class of Boronyls and the Mechanism of Boronyl Radical Reactions under Single Collision Conditions. Acc Chem Res 2017; 50:1154-1162. [PMID: 27991767 DOI: 10.1021/ar300308u] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Until recently, the chemistry of boronyl (BO), a diatomic radical isolectronic with the cyano (CN) species, has remained unknown. The boronyl group is characterized by a boron-oxygen multiple bond, and because of the inherent electron deficiency of the boron atom, boronyls (RBO) are highly reactive and typically only exist in their cyclotrimeric form (RBO)3. Due to their invaluable role as reactants, the isolation of the monomers in gas phase experiments has been extensively sought after by the organic synthesis and physical organic chemistry communities but never achieved. Besides the interests from a physical organic and synthetic point of view, boronyls also play a role as reaction intermediates in boron-assisted rocket propulsion systems. In this Account, we review recent experimental work in which gas phase organo boronyl monomers (RBO) are formed via bimolecular reactions of the boronyl radical (BO) with C2-C6 unsaturated hydrocarbons. The investigated hydrocarbons are widely exploited as fuels, and their reactions with boronyl radicals under single collision conditions lead to the formation of organo boronyls. Our studies also elucidate the mechanisms of their formation reactions thus furnishing a comprehension at the molecular level of this reaction class. The variety of the employed hydrocarbon substrates has allowed us to systematically classify the chemical behavior of the boronyl radicals. With the exception of the case of the dimethylacetylene reaction, the boron monoxide radical versus atomic hydrogen exchange mechanisms were always open leading to the formation of highly unsaturated organo boronyl monomers (RBO), which could be easily identified because they cannot trimerize under single collision conditions. Besides the hydrogen displacement pathway, methylacetylene, dimethylacetylene, and propylene, carrying one or two methyl groups, were also found to eliminate a methyl group. In all systems, the reactions were barrierless, indirect, and initiated by addition of the boron monoxide radical to the π electron density of the hydrocarbon molecule, with the radical center located at the boron atom of the BO radical, thus leading to doublet radical intermediates. These intermediates either decompose via hydrogen or methyl loss or isomerize prior to their decomposition via atomic hydrogen or migration of the BO moiety. A consistent trend suggests that all exit transition states are rather tight with those involved in the hydrogen atom loss depicting exit barriers of typically 25 to 35 kJ mol-1, whereas the methyl loss pathways are associated with tighter exit transition states located about 30-50 kJ mol-1 above the separated products. Further, the overall energetics suggest that those bimolecular reactions are exoergic by 40-90 kJ mol-1. These findings confirm that this reaction class leads to the formation of highly unsaturated organo boronyl molecules.
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Affiliation(s)
- Ralf I. Kaiser
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii 96822, United States
| | - Nadia Balucani
- Dipartimento
di Chimica, Biologia e Biotecnologie, Università di Perugia, 06123 Perugia, Italy
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11
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Pan H, Liu K, Caracciolo A, Casavecchia P. Crossed beam polyatomic reaction dynamics: recent advances and new insights. Chem Soc Rev 2017; 46:7517-7547. [DOI: 10.1039/c7cs00601b] [Citation(s) in RCA: 57] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review summarizes the developments in polyatomic reaction dynamics, focusing on reactions of unsaturated hydrocarbons with O-atoms and methane with atoms/radicals.
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Affiliation(s)
- Huilin Pan
- Institute of Atomic and Molecular Sciences (IAMS)
- Academia Sinica
- Taipei
- Taiwan
| | - Kopin Liu
- Institute of Atomic and Molecular Sciences (IAMS)
- Academia Sinica
- Taipei
- Taiwan
- Department of Physics
| | - Adriana Caracciolo
- Dipartimento di Chimica
- Biologia e Biotecnologie
- Università degli Studi di Perugia
- 06123 Perugia
- Italy
| | - Piergiorgio Casavecchia
- Dipartimento di Chimica
- Biologia e Biotecnologie
- Università degli Studi di Perugia
- 06123 Perugia
- Italy
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12
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Vazart F, Calderini D, Puzzarini C, Skouteris D, Barone V. State-of-the-Art Thermochemical and Kinetic Computations for Astrochemical Complex Organic Molecules: Formamide Formation in Cold Interstellar Clouds as a Case Study. J Chem Theory Comput 2016; 12:5385-5397. [PMID: 27689448 PMCID: PMC5856337 DOI: 10.1021/acs.jctc.6b00379] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We describe an integrated computational strategy aimed at providing reliable thermochemical and kinetic information on the formation processes of astrochemical complex organic molecules. The approach involves state-of-the-art quantum-mechanical computations, second-order vibrational perturbation theory, and kinetic models based on capture and transition state theory together with the master equation approach. Notably, tunneling, quantum reflection, and leading anharmonic contributions are accounted for in our model. Formamide has been selected as a case study in view of its interest as a precursor in the abiotic amino acid synthesis. After validation of the level of theory chosen for describing the potential energy surface, we have investigated several pathways of the OH + CH2NH and NH2 + H2CO reaction channels. Our results show that both reaction channels are essentially barrierless (in the sense that all relevant transition states lie below or only marginally above the reactants) and once tunneling is taken into the proper account indicate that the reaction can occur under the low temperature conditions of interstellar environments.
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Affiliation(s)
- Fanny Vazart
- Scuola Normale Superiore, piazza dei Cavalieri 7, 56125 Pisa, Italy
| | - Danilo Calderini
- Scuola Normale Superiore, piazza dei Cavalieri 7, 56125 Pisa, Italy
| | - Cristina Puzzarini
- Dipartimento di Chimica "Giacomo Ciamician", Via F. Selmi 2, 40126 Bologna, Italy
| | | | - Vincenzo Barone
- Scuola Normale Superiore, piazza dei Cavalieri 7, 56125 Pisa, Italy
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13
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Thompson KM, Gao Y, Marshall P. The Spin‐Forbidden Reaction of Ground‐State Sulfur Atoms with Ethylene. INT J CHEM KINET 2016. [DOI: 10.1002/kin.20977] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Kristopher M. Thompson
- Department of Chemistry and Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203–5017
| | - Yide Gao
- Department of Chemistry and Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203–5017
| | - Paul Marshall
- Department of Chemistry and Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203–5017
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14
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Vazart F, Latouche C, Skouteris D, Balucani N, Barone V. CYANOMETHANIMINE ISOMERS IN COLD INTERSTELLAR CLOUDS: INSIGHTS FROM ELECTRONIC STRUCTURE AND KINETIC CALCULATIONS. ACTA ACUST UNITED AC 2015. [DOI: 10.1088/0004-637x/810/2/111] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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15
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Barone V, Latouche C, Skouteris D, Vazart F, Balucani N, Ceccarelli C, Lefloch B. Gas-phase formation of the prebiotic molecule formamide: insights from new quantum computations. ACTA ACUST UNITED AC 2015. [DOI: 10.1093/mnrasl/slv094] [Citation(s) in RCA: 110] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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16
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Casavecchia P, Leonori F, Balucani N. Reaction dynamics of oxygen atoms with unsaturated hydrocarbons from crossed molecular beam studies: primary products, branching ratios and role of intersystem crossing. INT REV PHYS CHEM 2015. [DOI: 10.1080/0144235x.2015.1039293] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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17
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Leonori F, Skouteris D, Petrucci R, Casavecchia P, Rosi M, Balucani N. Combined crossed beam and theoretical studies of the C(1D) + CH4 reaction. J Chem Phys 2013; 138:024311. [DOI: 10.1063/1.4773579] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Balucani N, Skouteris D, Leonori F, Petrucci R, Hamberg M, Geppert WD, Casavecchia P, Rosi M. Combined crossed beam and theoretical studies of the N(2D) + C2H4 reaction and implications for atmospheric models of Titan. J Phys Chem A 2012; 116:10467-79. [PMID: 23016665 DOI: 10.1021/jp3072316] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The dynamics of the H displacement channels in the reaction N((2)D) + C(2)H(4) have been investigated by the crossed molecular beam technique with mass spectrometric detection and time-of-flight analysis at two different collision energies (17.2 and 28.2 kJ/mol). The interpretation of the scattering results is assisted by new electronic structure calculations of stationary points and product energetics for the C(2)H(4)N ground state doublet potential energy surface. RRKM statistical calculations have been performed to derive the product branching ratio under the conditions of the present experiments and of the atmosphere of Titan. Similarities and differences with respect to a recent study performed in crossed beam experiments coupled to ionization via tunable VUV synchrotron radiation are discussed (Lee, S.-H.; et al. Phys. Chem. Chem. Phys.2011, 13, 8515-8525). Implications for the atmospheric chemistry of Titan are presented.
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Affiliation(s)
- Nadia Balucani
- Dipartimento di Chimica, Università degli Studi di Perugia, 06123 Perugia, Italy.
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Bane MK, Thompson CD, Appadoo DRT, McNaughton D. Synchrotron far infrared spectroscopy of the ground, ν5, and ν15 states of thiirane. J Chem Phys 2012; 137:084306. [DOI: 10.1063/1.4747191] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
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Nakajima M, Miyoshi A, Sumiyoshi Y, Endo Y. Electronic spectra of the jet-cooled 1-methylvinylthio radical. J Chem Phys 2012; 136:184311. [DOI: 10.1063/1.4708809] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Laganà A, Garcia E, Paladini A, Casavecchia P, Balucani N. The last mile of molecular reaction dynamics virtual experiments: the case of the OH(N = 1–10) + CO(j = 0–3) reaction. Faraday Discuss 2012; 157:415-36; discussion 475-500. [DOI: 10.1039/c2fd20046e] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Balucani N, Leonori F, Petrucci R, Stazi M, Skouteris D, Rosi M, Casavecchia P. Formation of nitriles and imines in the atmosphere of Titan: combined crossed-beam and theoretical studies on the reaction dynamics of excited nitrogen atoms N(2D) with ethane. Faraday Discuss 2011; 147:189-216; discussion 251-82. [PMID: 21302548 DOI: 10.1039/c004748a] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The dynamics of the H-displacement channels in the reaction N(2D) + C2H6 have been investigated by the crossed molecular beam technique with mass spectrometric detection and time-of-flight analysis at two different collision energies (18.0 and 31.4 kJ mol(-1)). From the derived center-of-mass product angular and translational energy distributions the reaction micromechanisms and the product energy partitioning have been obtained. The interpretation of the scattering results is assisted by new ab initio electronic structure calculations of stationary points and product energetics for the C2H6N ground state doublet potential energy surface. C-C bond breaking and NH production channels have been theoretically characterized and the statistical branching ratio derived at the temperatures relevant for the atmosphere of Titan. Methanimine plus CH3 and ethanimine plus H are the main reaction channels. Implications for the atmospheric chemistry of Titan are discussed.
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Affiliation(s)
- Nadia Balucani
- Dipartimento di Chimica, Università degli Studi di Perugia, 06123, Perugia, Italy.
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Berteloite C, Le Picard SD, Sims IR, Rosi M, Leonori F, Petrucci R, Balucani N, Wang X, Casavecchia P. Low temperature kinetics, crossed beam dynamics and theoretical studies of the reaction S(1D) + CH4 and low temperature kinetics of S(1D) + C2H2. Phys Chem Chem Phys 2011; 13:8485-501. [DOI: 10.1039/c0cp02813d] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Balucani N, Leonori F, Bergeat A, Petrucci R, Casavecchia P. Crossed-beam dynamics studies of the radical–radical combustion reaction O(3P) + CH3(methyl). Phys Chem Chem Phys 2011; 13:8322-30. [DOI: 10.1039/c0cp01623c] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Leonori F, Hickson KM, Le Picard SD, Wang X, Petrucci R, Foggi P, Balucani N, Casavecchia P. Crossed-beam universal-detection reactive scattering of radical beams characterized by laser-induced-fluorescence: the case of C2and CN. Mol Phys 2010. [DOI: 10.1080/00268971003657110] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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