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2
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Shaaban IA, Assiri MA, Ali TE, Mohamed TA. Keto-enol tautomerism, spectral (infrared, Raman and NMR) studies and Normal coordinate analysis of 4-Methyl-2-hydroxyquinoline using quantum mechanical calculations. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.132137] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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3
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Mohamed TA, Shaaban IA, Soliman UA, Zoghaib WM. 2‐Hydroxy‐5‐nitropyridine and 5‐nitro‐2‐pyridone: Tautomerism, infrared, Raman, and NMR spectral interpretations, normal coordinate analysis, and DFT calculations. J CHIN CHEM SOC-TAIP 2021. [DOI: 10.1002/jccs.202100064] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Tarek A. Mohamed
- Department of Chemistry, Faculty of Science Al‐Azhar University (Men's Campus) Cairo Egypt
| | - Ibrahim A. Shaaban
- Department of Chemistry, Faculty of Science Al‐Azhar University (Men's Campus) Cairo Egypt
- Department of Chemistry College of Science, King Khalid University Abha Saudi Arabia
| | - Usama A. Soliman
- Department of Chemistry, Faculty of Science Al‐Azhar University (Men's Campus) Cairo Egypt
- Department of Chemistry, Faculty of Science Jazan University Jazan Saudi Arabia
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4
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Ali MA, Rahman MS, Roy R, Gambill P, Raynie DE, Halim MA. Structure Elucidation of Menthol-Based Deep Eutectic Solvent using Experimental and Computational Techniques. J Phys Chem A 2021; 125:2402-2412. [PMID: 33754725 DOI: 10.1021/acs.jpca.0c10735] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The structural properties and nonbonding interactions of a menthol-based deep eutectic solvent (DES) were investigated in detail employing experimental and computational methods. A mass spectrometry analysis confirmed the formation of 1:1 l-menthol/acetic acid. A molecular dynamics simulation was used to figure out energetically most favorable cluster conformers of the 1:1 l-menthol/acetic acid system. Density functional theory at the ωB97XD/6-311G (d,p) level of theory was employed to optimize the isolated structures and to calculate their thermochemical properties. Both experimental and computed IR spectra were analyzed for the samples. Additionally, vibrational circular dichroism (VCD) spectra of the samples were measured to prove the chirality transfer. Principal component analysis (PCA) was used to make the data interpretation more vivid. All the spectral data analyses and nanostructure elucidation proved the spontaneous formation of the DES through the formation of strong hydrogen bonding. Experimental solvatochromism and computed highest occupied molecular orbital-lowest unoccupied molecular orbital gaps validated the reasoning. Moreover, comparative VCD and IR spectral analyses clearly indicated a chirality transfer from the chiral menthol to achiral acetic acid. This study suggests that various techniques, such as mass spectrometry, IR, solvatochromism, and computed IR-VCD could be useful and important tools to elucidate nanostructure and nonbonding interactions of a DES. VCD could be used as an excellent complementary technique to IR spectroscopy for a chiral molecule-based DESs.
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Affiliation(s)
- Md Ackas Ali
- Division of Quantum Chemistry, The Red-Green Research Center, BICCB, 16, Tejkunipara, Tejgaon, Dhaka 1215, Bangladesh.,Department of Chemistry, Jahangirnagar University, Savar, Dhaka 1342, Bangladesh
| | - Md Sajjadur Rahman
- Department of Chemistry and Biochemistry, South Dakota State University, Brookings 57007, South Dakota, United States
| | - Ranen Roy
- Department of Chemistry and Biochemistry, South Dakota State University, Brookings 57007, South Dakota, United States
| | - Paul Gambill
- Department of Physical Sciences, University of Arkansas-Fort Smith, Fort Smith 72913-3649, Arkansas, United States
| | - Douglas E Raynie
- Department of Chemistry and Biochemistry, South Dakota State University, Brookings 57007, South Dakota, United States
| | - Mohammad A Halim
- Department of Physical Sciences, University of Arkansas-Fort Smith, Fort Smith 72913-3649, Arkansas, United States
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5
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Lemmens A, Rap DB, Thunnissen JMM, Gruet S, Steber AL, Panchagnula S, Tielens AGGM, Schnell M, Buma WJ, Rijs AM. Far-IR Absorption of Neutral Polycyclic Aromatic Hydrocarbons (PAHs): Light on the Mechanism of IR-UV Ion Dip Spectroscopy. J Phys Chem Lett 2020; 11:8997-9002. [PMID: 33035060 PMCID: PMC7649846 DOI: 10.1021/acs.jpclett.0c02714] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Gas-phase IR-UV double-resonance laser spectroscopy is an IR absorption technique that bridges the gap between experimental IR spectroscopy and theory. The IR experiments are used to directly evaluate predicted frequencies and potential energy surfaces as well as to probe the structure of isolated molecules. However, a detailed understanding of the underlying mechanisms is, especially in the far-IR regime, still far from complete, even though this is crucial for properly interpreting the recorded IR absorption spectra. Here, events occurring upon excitation to vibrational levels of polycyclic aromatic hydrocarbons by far-IR radiation from the FELIX free electron laser are followed using resonance-enhanced multiphoton ionization spectroscopy. These studies provide detailed insight into how ladder climbing and anharmonicity influence IR-UV spectroscopy and therefore the resulting IR signatures in the far-IR region. Moreover, the potential energy surfaces of these low-frequency delocalized modes are investigated and shown to have a strong harmonic character.
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Affiliation(s)
- Alexander
K. Lemmens
- Radboud
University, Institute for Molecules
and Materials, FELIX Laboratory, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
- University
of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Daniël B. Rap
- Radboud
University, Institute for Molecules
and Materials, FELIX Laboratory, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
| | - Johannes M. M. Thunnissen
- Radboud
University, Institute for Molecules
and Materials, FELIX Laboratory, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
| | - Sébastien Gruet
- Deutsches
Elektronen-Synchrotron, Notkestrasse 85, D-22607 Hamburg, Germany
- Institut
für Physikalische Chemie, Christian-Albrechts-Universität
zu Kiel, Max-Eyth-Strasse
1, D-24118 Kiel, Germany
| | - Amanda L. Steber
- Deutsches
Elektronen-Synchrotron, Notkestrasse 85, D-22607 Hamburg, Germany
- Institut
für Physikalische Chemie, Christian-Albrechts-Universität
zu Kiel, Max-Eyth-Strasse
1, D-24118 Kiel, Germany
| | - Sanjana Panchagnula
- Leiden
Observatory, Leiden University, Niels Bohrweg 2, 2333 CA Leiden, The Netherlands
| | | | - Melanie Schnell
- Deutsches
Elektronen-Synchrotron, Notkestrasse 85, D-22607 Hamburg, Germany
- Institut
für Physikalische Chemie, Christian-Albrechts-Universität
zu Kiel, Max-Eyth-Strasse
1, D-24118 Kiel, Germany
| | - Wybren Jan Buma
- Radboud
University, Institute for Molecules
and Materials, FELIX Laboratory, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
- University
of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Anouk M. Rijs
- Radboud
University, Institute for Molecules
and Materials, FELIX Laboratory, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
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6
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Spectral and computational studies on regioselective synthesis of 4-oxo-6-phenyl-2-selenoxo-1,2,3,4-tetrahydropyrimidine-5-carbonitrile. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127408] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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7
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Chakraborty S, Mulas G, Demyk K, Joblin C. Experimental Approach to the Study of Anharmonicity in the Infrared Spectrum of Pyrene from 14 to 723 K. J Phys Chem A 2019; 123:4139-4148. [PMID: 31002512 PMCID: PMC6557715 DOI: 10.1021/acs.jpca.8b11016] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Quantifying the effect of anharmonicity on the infrared spectrum of large molecules such as polycyclic aromatic hydrocarbons (PAHs) at high temperatures is the focus of a number of theoretical and experimental studies, many of them motivated by astrophysical applications. We recorded the IR spectrum of pyrene C16H10 microcrystals embedded in KBr pellets over a wide range of temperatures (14-723 K) and studied the evolution of band positions, widths, and integrated intensities with temperature. We identified jumps for some of the spectral characteristics of some bands in the 423-473 K range. These were attributed to a change of phase from crystal to molten in condensed pyrene, which appears to affect more strongly bands involving large CH motions. Empirical anharmonicity factors that quantify the linear evolution of band positions and widths with temperature for values larger than ∼150-250 K, depending on the band, were retrieved from both phases and averaged to provide recommended values for these anharmonicity factors. The derived values were found to be consistent with available gas phase data. We conclude about the relevance of the methodology to produce data that can be compared with calculated anharmonic IR spectra and provide input for models that simulate the IR emission of astro-PAHs.
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Affiliation(s)
- Shubhadip Chakraborty
- Institut de Recherche en Astrophysique et Planétologie, Université de Toulouse, CNRS, CNES, 9 Av. du Colonel Roche, 31028 Toulouse Cedex 4, France
| | - Giacomo Mulas
- Institut de Recherche en Astrophysique et Planétologie, Université de Toulouse, CNRS, CNES, 9 Av. du Colonel Roche, 31028 Toulouse Cedex 4, France
- Istituto Nazionale di Astrofisica (INAF), Osservatorio Astronomico di Cagliari, 09047 Selargius (CA), Italy
| | - Karine Demyk
- Institut de Recherche en Astrophysique et Planétologie, Université de Toulouse, CNRS, CNES, 9 Av. du Colonel Roche, 31028 Toulouse Cedex 4, France
| | - Christine Joblin
- Institut de Recherche en Astrophysique et Planétologie, Université de Toulouse, CNRS, CNES, 9 Av. du Colonel Roche, 31028 Toulouse Cedex 4, France
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8
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Calvo F. Conformational diversity in deprotonated water clusters and anharmonic infrared spectra. MOLECULAR SIMULATION 2019. [DOI: 10.1080/08927022.2018.1513653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- F. Calvo
- Université Grenoble Alpes, CNRS, LIPhy, Grenoble, France
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Hopkins WS, Carr PJJ, Huang D, Bishop KP, Burt M, McMahon TB, Steinmetz V, Fillion E. Infrared-Driven Charge Transfer in Transition Metal B12F12 Clusters. J Phys Chem A 2015; 119:8469-75. [DOI: 10.1021/acs.jpca.5b03932] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- W. Scott Hopkins
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Patrick J. J. Carr
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Denzel Huang
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Kevin P. Bishop
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Michael Burt
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Terrance B. McMahon
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Vincent Steinmetz
- CLIO/LCP
Bat. 201, Porte 2, Université Paris-Sud 11, Orsay 91405 Cedex, France
| | - Eric Fillion
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
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Calvo F. Atomistic Modeling of IR Action Spectra Under Circularly Polarized Electromagnetic Fields: Toward Action VCD Spectra. Chirality 2015; 27:253-61. [DOI: 10.1002/chir.22421] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2014] [Revised: 11/06/2014] [Accepted: 11/28/2014] [Indexed: 11/12/2022]
Affiliation(s)
- Florent Calvo
- Laboratoire Interdisciplinaire de Physique; Université Joseph Fourier; Grenoble France
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11
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Calvo F, Falvo C, Parneix P. Atomistic Modeling of Vibrational Action Spectra in Polyatomic Molecules: Nuclear Quantum Effects. J Phys Chem A 2014; 118:5427-36. [DOI: 10.1021/jp5040147] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- F. Calvo
- ILM, Université Lyon I and CNRS UMR 5306, 43 Bd du 11 Novembre 1918, F69622 Villeurbanne Cedex, France
| | - C. Falvo
- Institut des Sciences
Moléculaires d’Orsay, UMR CNRS 8214, Université Paris Sud 11, Bât.
210, F91405 Orsay Cedex, France
| | - P. Parneix
- Institut des Sciences
Moléculaires d’Orsay, UMR CNRS 8214, Université Paris Sud 11, Bât.
210, F91405 Orsay Cedex, France
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12
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Hopkins WS, Hasan M, Burt M, Marta RA, Fillion E, McMahon TB. Persistent Intramolecular C–H···X (X = O or S) Hydrogen-Bonding in Benzyl Meldrum’s Acid Derivatives. J Phys Chem A 2014; 118:3795-3803. [DOI: 10.1021/jp5029245] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- W. Scott Hopkins
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
| | - Moaraj Hasan
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
| | - Michael Burt
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
| | - Rick A. Marta
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
| | - Eric Fillion
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
| | - Terry B. McMahon
- Department of Chemistry, University of Waterloo, Waterloo, ON, Canada, N2L 3G1
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13
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Féraud G, Pino T, Falvo C, Parneix P, Combriat T, Bréchignac P. Intramolecular Processes Revealed Using UV-Laser-Induced IR-Fluorescence: A New Perspective on the "Channel Three" of Benzene. J Phys Chem Lett 2014; 5:1083-1090. [PMID: 26274453 DOI: 10.1021/jz402697u] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Radiative relaxation in the infrared (IR) is common following nonradiative electronic relaxation processes, but it is rarely measured. We present ultraviolet laser-induced infrared fluorescence (UV-LIIRF) excitation spectroscopy and dispersed UV-LIIRF spectroscopy of gas phase benzene vibronically excited around the onset of channel 3, using a homemade spectrometer. We found that the vibrational IR fluorescence yield is clearly higher when benzene is excited above the onset than when it is excited below. Significant changes in dispersed IR emission profiles resulting from excitations below and above the onset of channel 3 were also observed. These results suggest that isomerization of benzene toward fulvene occurs efficiently below the opening of channel 3 and confirm that channel 3 involves a photophysical relaxation pathway that efficiently competes with isomerization.
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Affiliation(s)
- G Féraud
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
| | - T Pino
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
| | - C Falvo
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
| | - P Parneix
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
| | - T Combriat
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
| | - Ph Bréchignac
- Institut des Sciences Moléculaires d'Orsay, CNRS, Univ Paris-Sud, 91405 Orsay Cedex, France
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Marciante M, Calvo F. Modelling infrared action spectra of protonated water clusters. MOLECULAR SIMULATION 2013. [DOI: 10.1080/08927022.2013.844804] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- M. Marciante
- ILM, CNRS UMR 5306, Université Lyon 1, Bâtiment Kastler, 43 Bd du 11 Novembre 1918, F69622, Villeurbanne Cedex, France
| | - F. Calvo
- ILM, CNRS UMR 5306, Université Lyon 1, Bâtiment Kastler, 43 Bd du 11 Novembre 1918, F69622, Villeurbanne Cedex, France
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15
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Simon A, Spiegelman F. Water clusters adsorbed on polycyclic aromatic hydrocarbons: Energetics and conformational dynamics. J Chem Phys 2013; 138:194309. [DOI: 10.1063/1.4805015] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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16
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Falvo C, Friha H, Pino T, Dhaouadi Z, Parneix P, Calvo F, Bréchignac P. Effects of hydrogen dissociation on the infrared emission spectra of naphthalene: theoretical modeling. Phys Chem Chem Phys 2013; 15:10241-50. [DOI: 10.1039/c3cp44703k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Falvo C, Calvo F, Parneix P. Probing the spin multiplicity of gas-phase polycyclic aromatic hydrocarbons through their infrared emission spectrum: a theoretical study. J Chem Phys 2012; 137:064303. [PMID: 22897269 DOI: 10.1063/1.4739468] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The anharmonic infrared emission spectrum following an optical excitation has been calculated for a variety of polycyclic aromatic hydrocarbon molecules in their ground singlet electronic state or in their triplet state. The computational protocol relies on second-order perturbation theory and involves a quartic vibrational Hamiltonian, the vibrational quantum numbers being sampled according to a Monte Carlo procedure. In the case of neutral naphthalene, the IR spectrum obtained in the (ground) singlet state differs significantly from the spectrum in the triplet state, especially for out-of-plane CH bending modes. Although not as prominent, spectral differences in larger molecules are still observable.
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Affiliation(s)
- Cyril Falvo
- Institut des Sciences Moléculaires d'Orsay, UMR CNRS 8214, Université Paris Sud, F91405 Orsay Cedex, France.
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Parneix P, Basire M, Calvo F. Time-resolved infrared emission spectra of naphthalene under gas phase laboratory and astrophysical conditions. COMPUT THEOR CHEM 2012. [DOI: 10.1016/j.comptc.2011.12.014] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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19
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Van-Oanh NT, Falvo C, Calvo F, Lauvergnat D, Basire M, Gaigeot MP, Parneix P. Improving anharmonic infrared spectra using semiclassically prepared molecular dynamics simulations. Phys Chem Chem Phys 2012; 14:2381-90. [DOI: 10.1039/c2cp23101h] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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20
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Calvo F, Basire M, Parneix P. Temperature effects on the rovibrational spectra of pyrene-based PAHs. J Phys Chem A 2011; 115:8845-54. [PMID: 21786804 DOI: 10.1021/jp202935p] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Absorption infrared spectra have been computed for a variety of polycyclic aromatic hydrocarbon molecules of the pyrene family, taking into account anharmonicity and temperature effects, rovibrational quantization, and couplings. The energy levels are described by a second-order perturbative expansion of the rovibrational Hamiltonian in the vibrational and rotational quantum numbers, as relevant for a symmetric-top molecule, with ingredients obtained from quantum chemistry calculations. Multicanonical Monte Carlo simulations are carried out to compute bidimensional IR intensity histograms as a function of total energy and vibrational frequency, which then provide the absorption spectrum at arbitrary temperatures via a Laplace transformation. The main spectral features analyzed for neutral, anionic, and cationic pyrene indicate a strong dependence on temperature, in agreement with existing laboratory experiments, and a significant contribution of rotational degrees of freedom to the overall broadenings. The spectral shifts and broadenings reveal some sensitivity of anharmonicities to the charge and protonation states and, in the case of protonated pyrene and pyrenyl cation, on possible isomers and between aromatic and aliphatic C-H bands. Implications of the present work to the general issue of interstellar emission features are discussed.
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Affiliation(s)
- F Calvo
- LASIM, Université de Lyon and CNRS UMR 5579, 43 Bd du 11 Novembre 1918, F69622 Villeurbanne Cedex, France.
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21
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Basire M, Parneix P, Pino T, Bréchignac P, Calvo F. Modeling the anharmonic infrared Emission Spectra of PAHs: Application to the Pyrene Cation. ACTA ACUST UNITED AC 2011. [DOI: 10.1051/eas/1146009] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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22
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Simon A, Rapacioli M, Lanza M, Joalland B, Spiegelman F. Molecular dynamics simulations on [FePAH]+ π-complexes of astrophysical interest: anharmonic infrared spectroscopy. Phys Chem Chem Phys 2011; 13:3359-74. [PMID: 21243160 DOI: 10.1039/c0cp00990c] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this article, classical Born-Oppenheimer molecular dynamics (MD) simulations in the microcanonical ensemble are performed on neutral and cationic polycyclic aromatic hydrocarbon (PAH) species, focusing on [FePAH](+)π-complexes. Their anharmonic mid-infrared (mid-IR) spectra in the classical approximation are derived. This approach allows us to describe the influence of the energy of a system on its IR spectrum in terms of band-shifts and broadenings. The MD simulations are performed on a potential energy surface (PES) described at the self-consistent-charge density functional tight-binding level of theory. The PES is benchmarked on DFT calculations, showing the validity of the approach for complexes of Fe(+) with PAHs larger than coronene (C(24)H(12)) that are of astrophysical interest. MD simulations at high temperature show the occurrence of the diffusion of the Fe cation on the surface of the PAH. It proceeds through the edge of the carbon skeleton which is the lowest energy pathway presenting barriers smaller than 1 eV. Although only qualitative information on the band broadenings can be obtained, we show that the dependence of the computed positions of the main bands of [C(24)H(12)](0/+)and [FeC(24)H(12)](+)π-complexes on temperature can be fit by linear laws. The spectral trends determined for [FeC(24)H(12)](+) are compared to those of N-substituted [C(23)NH(12)](+)and [SiC(24)H(12)](+)π-complexes of astrophysical interest.
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Affiliation(s)
- Aude Simon
- Laboratoire de Chimie et Physique Quantiques, IRSAMC, Université de Toulouse, UPS, LCPQ, 118 Route de Narbonne, F-31062 Toulouse, France.
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23
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Calvo F, Parneix P, Van-Oanh NT. Finite-temperature infrared spectroscopy of polycyclic aromatic hydrocarbon molecules. II. Principal mode analysis and self-consistent phonons. J Chem Phys 2010; 133:074303. [DOI: 10.1063/1.3465554] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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24
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Calvo F, Parneix P, Van-Oanh NT. Finite temperature infrared spectroscopy of polycyclic aromatic hydrocarbon molecules: Path-integral molecular dynamics. J Chem Phys 2010; 132:124308. [DOI: 10.1063/1.3367719] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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