1
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Affiliation(s)
- Guido Raos
- Department of Chemistry, Materials and Chemical Engineering “G. Natta”, Politecnico di Milano, Via L. Mancinelli 7, I-20131 Milano, Italy
| | - Bruno Zappone
- Consiglio Nazionale delle Ricerche - Istituto di Nanotecnologia (CNR-Nanotec), Via P. Bucci, 33/C, 87036 Rende (CS), Italy
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2
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Arbe A, Alvarez F, Colmenero J. Insight into the Structure and Dynamics of Polymers by Neutron Scattering Combined with Atomistic Molecular Dynamics Simulations. Polymers (Basel) 2020; 12:E3067. [PMID: 33371357 PMCID: PMC7767341 DOI: 10.3390/polym12123067] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 12/04/2020] [Accepted: 12/11/2020] [Indexed: 11/23/2022] Open
Abstract
Combining neutron scattering and fully atomistic molecular dynamics simulations allows unraveling structural and dynamical features of polymer melts at different length scales, mainly in the intermolecular and monomeric range. Here we present the methodology developed by us and the results of its application during the last years in a variety of polymers. This methodology is based on two pillars: (i) both techniques cover approximately the same length and time scales and (ii) the classical van Hove formalism allows easily calculating the magnitudes measured by neutron scattering from the simulated atomic trajectories. By direct comparison with experimental results, the simulated cell is validated. Thereafter, the information of the simulations can be exploited, calculating magnitudes that are experimentally inaccessible or extending the parameters range beyond the experimental capabilities. We show how detailed microscopic insight on structural features and dynamical processes of various kinds has been gained in polymeric systems with different degrees of complexity, and how intriguing questions as the collective behavior at intermediate length scales have been faced.
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Affiliation(s)
- Arantxa Arbe
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain; (A.A.); (F.A.)
| | - Fernando Alvarez
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain; (A.A.); (F.A.)
- Departamento de Polímeros y Materiales Avanzados, Física, Química y Tecnología (UPV/EHU), Apartado 1072, E-20080 San Sebastián, Spain
| | - Juan Colmenero
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain; (A.A.); (F.A.)
- Departamento de Polímeros y Materiales Avanzados, Física, Química y Tecnología (UPV/EHU), Apartado 1072, E-20080 San Sebastián, Spain
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
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3
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González-Burgos M, Asenjo-Sanz I, Pomposo JA, Radulescu A, Ivanova O, Pasini S, Arbe A, Colmenero J. Structure and Dynamics of Irreversible Single-Chain Nanoparticles in Dilute Solution. A Neutron Scattering Investigation. Macromolecules 2020. [DOI: 10.1021/acs.macromol.0c01451] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Marina González-Burgos
- Centro de Fı́sica de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
| | - Isabel Asenjo-Sanz
- Centro de Fı́sica de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
| | - José A. Pomposo
- Centro de Fı́sica de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
- Departamento de Fı́sica de Materiales (UPV/EHU), Apartado 1072, E-20018 San Sebastián, Spain
| | - Aurel Radulescu
- Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Jülich GmbH, Lichtenbergstraße 1, 85747 Garching, Germany
| | - Oxana Ivanova
- Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Jülich GmbH, Lichtenbergstraße 1, 85747 Garching, Germany
| | - Stefano Pasini
- Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Jülich GmbH, Lichtenbergstraße 1, 85747 Garching, Germany
| | - Arantxa Arbe
- Centro de Fı́sica de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
| | - Juan Colmenero
- Centro de Fı́sica de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
- Departamento de Fı́sica de Materiales (UPV/EHU), Apartado 1072, E-20018 San Sebastián, Spain
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
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4
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Everaers R, Karimi-Varzaneh HA, Fleck F, Hojdis N, Svaneborg C. Kremer–Grest Models for Commodity Polymer Melts: Linking Theory, Experiment, and Simulation at the Kuhn Scale. Macromolecules 2020. [DOI: 10.1021/acs.macromol.9b02428] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Ralf Everaers
- Université de Lyon, Ecole Normale Supérieure de Lyon, CNRS, Laboratoire de Physique and Centre Blaise Pascal de l’ENS de Lyon, F-69342 Lyon, France
| | | | - Frank Fleck
- Continental Reifen Deutschland GmbH, Jädekamp 30, D-30419 Hannover, Germany
| | - Nils Hojdis
- Institute of Applied Polymer Chemistry, Aachen University of Applied Sciences, Heinrich-Mussmann-Str.1, 52428 Jülich, Germany
| | - Carsten Svaneborg
- University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
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5
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Yasuda Y, Hidaka Y, Mayumi K, Yamada T, Fujimoto K, Okazaki S, Yokoyama H, Ito K. Molecular Dynamics of Polyrotaxane in Solution Investigated by Quasi-Elastic Neutron Scattering and Molecular Dynamics Simulation: Sliding Motion of Rings on Polymer. J Am Chem Soc 2019; 141:9655-9663. [PMID: 31090404 DOI: 10.1021/jacs.9b03792] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
In this study, we investigated the molecular dynamics of polyrotaxane (PR), composed of α-cyclodextrins (CDs) and a poly(ethylene glycol) (PEG) axial chain, in solution by means of quasi-elastic neutron scattering (QENS) measurements and full-atomistic molecular dynamics (MD) simulations. From QENS experiments, we estimated the diffusion coefficients of CD and PEG monomers in PR, which are in quantitative agreement with those obtained by MD simulations. By analyzing the simulation results, we succeeded, for the first time, in observing and quantifying the sliding motion of CD along a PEG chain. The diffusion coefficient for the sliding motion is almost 6 times lower than that of the translational diffusion of CD in PR at room temperature. The retardation of the sliding motion is caused by the energy barrier on PEG produced by molecular interactions between CD and PEG. We propose a simple equation to describe the diffusion coefficient of the sliding dynamics in PR by combining the Einstein-Stokes diffusion model and a one-dimensional jump diffusion model. This work provides a general strategy for the molecular designs to control the sliding motion in PR.
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Affiliation(s)
- Yusuke Yasuda
- Department of Advanced Materials Science, School of Frontier Sciences , The University of Tokyo , 5-1-5 Kashiwa-noha , Kashiwa , Chiba 277-8561 , Japan
| | - Yuta Hidaka
- Department of Advanced Materials Science, School of Frontier Sciences , The University of Tokyo , 5-1-5 Kashiwa-noha , Kashiwa , Chiba 277-8561 , Japan
| | - Koichi Mayumi
- Department of Advanced Materials Science, School of Frontier Sciences , The University of Tokyo , 5-1-5 Kashiwa-noha , Kashiwa , Chiba 277-8561 , Japan
| | - Takeshi Yamada
- Neutron Science and Technology Center , Comprehensive Research Organization for Science and Society (CROSS) , IQBRC Building, 162-1 Shirakata , Tokai, Naka , Ibaraki 319-1106 , Japan
| | - Kazushi Fujimoto
- Department of Materials Chemistry , Nagoya University , Furo-cho , Chikusa-ku, Nagoya 464-8603 , Japan
| | - Susumu Okazaki
- Department of Materials Chemistry , Nagoya University , Furo-cho , Chikusa-ku, Nagoya 464-8603 , Japan
| | - Hideaki Yokoyama
- Department of Advanced Materials Science, School of Frontier Sciences , The University of Tokyo , 5-1-5 Kashiwa-noha , Kashiwa , Chiba 277-8561 , Japan
| | - Kohzo Ito
- Department of Advanced Materials Science, School of Frontier Sciences , The University of Tokyo , 5-1-5 Kashiwa-noha , Kashiwa , Chiba 277-8561 , Japan
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6
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Affiliation(s)
- Marius Hofmann
- Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
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7
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Arbe A, Pomposo J, Moreno A, LoVerso F, González-Burgos M, Asenjo-Sanz I, Iturrospe A, Radulescu A, Ivanova O, Colmenero J. Structure and dynamics of single-chain nano-particles in solution. POLYMER 2016. [DOI: 10.1016/j.polymer.2016.07.059] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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8
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Hoffmann I, Farago B, Schweins R, Falus P, Sharp M, Prévost S, Gradzielski M. On the mesoscopic origins of high viscosities in some polyelectrolyte-surfactant mixtures. J Chem Phys 2015; 143:074902. [PMID: 26298151 DOI: 10.1063/1.4928583] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Ingo Hoffmann
- Stranski-Laboratorium für Physikalische und Theoretische Chemie, Institut für Chemie, Technische Universität Berlin, Straße des 17. Juni 124, Sekr. TC 7, D-10623 Berlin, Germany
- Institut Max von Laue-Paul Langevin (ILL), F-38042 Grenoble Cedex 9, France
| | - Bela Farago
- Institut Max von Laue-Paul Langevin (ILL), F-38042 Grenoble Cedex 9, France
| | - Ralf Schweins
- Institut Max von Laue-Paul Langevin (ILL), F-38042 Grenoble Cedex 9, France
| | - Peter Falus
- Institut Max von Laue-Paul Langevin (ILL), F-38042 Grenoble Cedex 9, France
| | - Melissa Sharp
- Institut Max von Laue-Paul Langevin (ILL), F-38042 Grenoble Cedex 9, France
| | - Sylvain Prévost
- Stranski-Laboratorium für Physikalische und Theoretische Chemie, Institut für Chemie, Technische Universität Berlin, Straße des 17. Juni 124, Sekr. TC 7, D-10623 Berlin, Germany
- Helmholtz-Zentrum Berlin, D-14109 Berlin, Germany
| | - Michael Gradzielski
- Stranski-Laboratorium für Physikalische und Theoretische Chemie, Institut für Chemie, Technische Universität Berlin, Straße des 17. Juni 124, Sekr. TC 7, D-10623 Berlin, Germany
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9
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10
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Khairy Y, Alvarez F, Arbe A, Colmenero J. Applicability of mode-coupling theory to polyisobutylene: a molecular dynamics simulation study. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042302. [PMID: 24229167 DOI: 10.1103/physreve.88.042302] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2013] [Indexed: 06/02/2023]
Abstract
The applicability of Mode Coupling Theory (MCT) to the glass-forming polymer polyisobutylene (PIB) has been explored by using fully atomistic molecular dynamics simulations. MCT predictions for the so-called asymptotic regime have been successfully tested on the dynamic structure factor and the self-correlation function of PIB main-chain carbons calculated from the simulated cell. The factorization theorem and the time-temperature superposition principle are satisfied. A consistent fitting procedure of the simulation data to the MCT asymptotic power-laws predicted for the α-relaxation regime has delivered the dynamic exponents of the theory-in particular, the exponent parameter λ-the critical non-ergodicity parameters, and the critical temperature T(c). The obtained values of λ and T(c) agree, within the uncertainties involved in both studies, with those deduced from depolarized light scattering experiments [A. Kisliuk et al., J. Polym. Sci. Part B: Polym. Phys. 38, 2785 (2000)]. Both, λ and T(c)/T(g) values found for PIB are unusually large with respect to those commonly obtained in low molecular weight systems. Moreover, the high T(c)/T(g) value is compatible with a certain correlation of this parameter with the fragility in Angell's classification. Conversely, the value of λ is close to that reported for real polymers, simulated "realistic" polymers and simple polymer models with intramolecular barriers. In the framework of the MCT, such finding should be the signature of two different mechanisms for the glass-transition in real polymers: intermolecular packing and intramolecular barriers combined with chain connectivity.
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Affiliation(s)
- Y Khairy
- Centro de Física de Materiales (CSIC-UPV/EHU) - Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
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11
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Colmenero J, Arbe A. Recent progress on polymer dynamics by neutron scattering: From simple polymers to complex materials. ACTA ACUST UNITED AC 2012. [DOI: 10.1002/polb.23178] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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12
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Hofmann M, Herrmann A, Abou Elfadl A, Kruk D, Wohlfahrt M, Rössler EA. Glassy, Rouse, and Entanglement Dynamics As Revealed by Field Cycling 1H NMR Relaxometry. Macromolecules 2012. [DOI: 10.1021/ma202371p] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- M. Hofmann
- Experimentalphysik
II, Universität Bayreuth, D-95440
Bayreuth, Germany
| | - A. Herrmann
- Experimentalphysik
II, Universität Bayreuth, D-95440
Bayreuth, Germany
| | - A. Abou Elfadl
- Experimentalphysik
II, Universität Bayreuth, D-95440
Bayreuth, Germany
| | - D. Kruk
- University of Warmia & Mazury Olsztyn, Faculty of Mathematics & Computer Science, Sloneczna 54, PL-10710 Olsztyn, Poland
| | - M. Wohlfahrt
- Experimentalphysik
II, Universität Bayreuth, D-95440
Bayreuth, Germany
| | - E. A. Rössler
- Experimentalphysik
II, Universität Bayreuth, D-95440
Bayreuth, Germany
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13
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Pérez-Aparicio R, Alvarez F, Arbe A, Willner L, Richter D, Falus P, Colmenero J. Chain Dynamics of Unentangled Poly(ethylene-alt-propylene) Melts by Means of Neutron Scattering and Fully Atomistic Molecular Dynamics Simulations. Macromolecules 2011. [DOI: 10.1021/ma102909r] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- R. Pérez-Aparicio
- Departamento de Física de Materiales UPV/EHU, Apartado 1072, 20080 San Sebastián, Spain
| | - F. Alvarez
- Departamento de Física de Materiales UPV/EHU, Apartado 1072, 20080 San Sebastián, Spain
- Centro de Física de Materiales (CSIC−UPV/EHU), Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
| | - A. Arbe
- Centro de Física de Materiales (CSIC−UPV/EHU), Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
| | - L. Willner
- Institut für Festkörperforschung, Forschungszentrum Jülich GmbH, D−52425 Jülich, Germany
| | - D. Richter
- Institut für Festkörperforschung, Forschungszentrum Jülich GmbH, D−52425 Jülich, Germany
| | - P. Falus
- Institut Laue Langevin, BP 156, 38042 Grenoble Cedex 9, France
| | - J. Colmenero
- Departamento de Física de Materiales UPV/EHU, Apartado 1072, 20080 San Sebastián, Spain
- Centro de Física de Materiales (CSIC−UPV/EHU), Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
- Donostia International Physics Center, Paseo Manuel de Lardizabal 4, 20018 San Sebastián, Spain
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14
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Affiliation(s)
- A. Agapov
- Department of Polymer Science, University of Akron, Akron, Ohio 44325-3909, United States
- Department of Chemistry and Department of Physics & Astronomy, University of Tennessee, Knoxville, Tennessee 37996-1600, United States, and Chemical Sciences Division, ORNL, Oak Ridge, Tennessee 37830-6197, United States
| | - A. P. Sokolov
- Department of Chemistry and Department of Physics & Astronomy, University of Tennessee, Knoxville, Tennessee 37996-1600, United States, and Chemical Sciences Division, ORNL, Oak Ridge, Tennessee 37830-6197, United States
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15
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Chan NY, Dunstan DE. The thermodynamics of polymer mixing and compression in the semidilute regime. J Phys Chem B 2010; 114:10520-3. [PMID: 20666451 DOI: 10.1021/jp101793c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Polymers present a fascinating range of mechanical properties in the extension, compression, and flow of soft condensed matter. Entropy determines the physics of the elastic material behavior of polymeric systems in deformation. Classical models of polymer dynamics have assumed chain entanglement and resulting reptation in concentrated polymer solutions. Here, we present a thermodynamic treatment of interacting chains in solution with increasing concentration from the dilute to concentrated regimes. As the polymer chain concentration increases above the critical overlap, the chains must either compress or overlap and entangle, resulting in a decrease in chain configurational entropy. The free energy of chain entanglement is shown to be less favored than compression at concentrations above the critical overlap. Elastic forces act on the chains to reduce the dimensions to the ideal random walk size with increasing concentration. At significantly higher concentrations, the free energies reach an asymptote where chain compression and entanglement are simultaneously possible. Entanglement and reptation are shown to be statistically improbable in the semidilute regime, and it is concluded that the compression of polymer chains is favored at semidilute concentrations.
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Affiliation(s)
- Nikko Y Chan
- Department of Chemical and Biomolecular Engineering, University of Melbourne, VIC 3010, Australia
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16
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Arbe A, Colmenero J. Characterization of the "simple-liquid" state in a polymeric system: coherent and incoherent scattering functions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 80:041805. [PMID: 19905331 DOI: 10.1103/physreve.80.041805] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2009] [Indexed: 05/28/2023]
Abstract
By means of time-of-flight neutron scattering, we have characterized the dynamic structure factor and the hydrogen motions of polyethylene above its melting point. As signatures of simple-liquid dynamics, we observe that (i) in the explored dynamic window, the intermediate scattering functions display a single-step decay, without reminiscence of cage effects, and (ii) the structural relaxation as observed at the intermolecular structure factor peak shows a weak temperature dependence, indicating a low degree of interchain cooperativity. However, stretched functional forms are observed for all length scales and temperatures investigated. An apparent direct crossover from the microscopic regime to Rouse-like dynamics suggests an essential role of connectivity in the observed stretching. Finally, while at momentum-transfer values above the structure factor peak the relation between coherent and incoherent characteristic times is reasonably described by the de Gennes narrowing, at larger length scales it is not reproduced by any existing approach.
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Affiliation(s)
- A Arbe
- Centro de Física de Materiales (CSIC-UPV/EHU)-Materials Physics Center, Apartado 1072, 20080 San Sebastián, Spain.
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17
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Chen C, Maranas JK. A Molecular View of Dynamic Responses When Mixing Poly(ethylene oxide) and Poly(methyl methacrylate). Macromolecules 2009. [DOI: 10.1021/ma802183h] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Chunxia Chen
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802
| | - Janna K. Maranas
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802
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18
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Brodeck M, Alvarez F, Arbe A, Juranyi F, Unruh T, Holderer O, Colmenero J, Richter D. Study of the dynamics of poly(ethylene oxide) by combining molecular dynamic simulations and neutron scattering experiments. J Chem Phys 2009; 130:094908. [DOI: 10.1063/1.3077858] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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19
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Tsolou G, Mavrantzas VG, Makrodimitri ZA, Economou IG, Gani R. Atomistic Simulation of the Sorption of Small Gas Molecules in Polyisobutylene. Macromolecules 2008. [DOI: 10.1021/ma8007652] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
| | | | | | | | - Rafiqul Gani
- CAPEC, Department of Chemical and Biochemical Engineering, Technical University of Denmark, DK-2800 Lyngby, Denmark
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20
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Meyer H, Wittmer JP, Kreer T, Beckrich P, Johner A, Farago J, Baschnagel J. Static Rouse modes and related quantities: corrections to chain ideality in polymer melts. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2008; 26:25-33. [PMID: 18286228 DOI: 10.1140/epje/i2007-10250-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2007] [Accepted: 11/23/2007] [Indexed: 05/25/2023]
Abstract
Following the Flory ideality hypothesis intrachain and interchain excluded-volume interactions are supposed to compensate each other in dense polymer systems. Multichain effects should thus be neglected and polymer conformations may be understood from simple phantom chain models. Here we provide evidence against this phantom chain, mean-field picture. We analyze numerically and theoretically the static correlation function of the Rouse modes. Our numerical results are obtained from computer simulations of two coarse-grained polymer models for which the strength of the monomer repulsion can be varied, from full excluded volume ("hard monomers") to no excluded volume ("phantom chains"). For nonvanishing excluded volume we find the simulated correlation function of the Rouse modes to deviate markedly from the predictions of phantom chain models. This demonstrates that there are nonnegligible correlations along the chains in a melt. These correlations can be taken into account by perturbation theory. Our simulation results are in good agreement with these new theoretical predictions.
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Affiliation(s)
- H Meyer
- Institut Charles Sadron, CNRS, 23 rue du Loess, Strasbourg Cedex, France
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21
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Chen C, Maranas JK, García-Sakai V. Local Dynamics of Syndiotactic Poly(methyl methacrylate) Using Molecular Dynamics Simulation. Macromolecules 2006. [DOI: 10.1021/ma0610562] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Chunxia Chen
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802
| | - Janna K. Maranas
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802
| | - Victoria García-Sakai
- NIST Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, Maryland 20899-8562
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22
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Monkenbusch M, Allgaier J, Richter D, Stellbrink J, Fetters LJ, Greiner A. Nonflexible Coils in Solution: A Neutron Spin-Echo Investigation of Alkyl-Substituted Polynorbornenes in Tetrahydrofuran. Macromolecules 2006. [DOI: 10.1021/ma0618979] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael Monkenbusch
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
| | - Jürgen Allgaier
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
| | - Dieter Richter
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
| | - Jörg Stellbrink
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
| | - Lewis J. Fetters
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
| | - Andreas Greiner
- Institut für Festkörperforschung, Forschungszentrum Jülich, D-52425 Jülich, Germany; School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853-5021; and FB Chemie und Wissenschaftliches Zentrum für Materialwissenschaften, Philipps-Universität Marburg, D-35032 Marburg, Germany
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23
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Allegra G, Raos G. Sliding friction between polymer surfaces: A molecular interpretation. J Chem Phys 2006; 124:144713. [PMID: 16626237 DOI: 10.1063/1.2193509] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
For two contacting rigid bodies, the friction force F is proportional to the normal load and independent of the macroscopic contact area and relative velocity V (Amonton's law). With two mutually sliding polymer samples, the surface irregularities transmit deformation to the underlying material. Energy loss along the deformation cycles is responsible for the friction force, which now appears to depend strongly on V [see, e.g., N. Maeda et al., Science 297, 379 (2002)]. We base our theoretical interpretation on the assumption that polymer chains are mainly subjected to oscillatory "reptation" along their "tubes." At high deformation frequencies-i.e., with a large sliding velocity V-the internal viscosity due to the rotational energy barriers around chain bonds hinders intramolecular mobility. As a result, energy dissipation and the correlated friction force strongly diminish at large V. Derived from a linear differential equation for chain dynamics, our results are basically consistent with the experimental data by Maeda et al. [Science 297, 379 (2002)] on modified polystyrene. Although the bulk polymer is below T(g), we regard the first few chain layers below the surface to be in the liquid state. In particular, the observed maximum of F vs V is consistent with physically reasonable values of the molecular parameters. As a general result, the ratio FV is a steadily decreasing function of V, tending to V(-2) for large velocities. We evaluate a much smaller friction for a cross-linked polymer under the assumption that the junctions are effectively immobile, also in agreement with the experimental results of Maeda et al. [Science 297, 379 (2002)].
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Affiliation(s)
- Giuseppe Allegra
- Dipartimento di Chimica, Materiali e Ingegneria Chimica G. Natta, Politecnico di Milano, Via L. Mancinelli 7, I-20131 Milano, Italy.
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24
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Farago B, Chen C, Maranas JK, Kamath S, Colby RH, Pasquale AJ, Long TE. Collective motion in poly(ethylene oxide)/poly(methylmethacrylate) blends. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:031809. [PMID: 16241475 DOI: 10.1103/physreve.72.031809] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2005] [Indexed: 05/05/2023]
Abstract
We present neutron spin echo and structural measurements on a perdeuterated miscible polymer blend: poly(ethylene oxide)[PEO]/poly(methyl methacrylate)[PMMA], characterized by a large difference in component glass transition temperatures and minimal interactions. The measurements cover the q range 0.35 to 1.66 A(-1) and the temperature range Tg -75 to Tg +89 K, where Tg is the blend glass transition. The spectra, obtained directly in the time domain, are very broad with stretching parameters beta approximately 0.30. The relaxation times vary considerably over the spatial range considered however at none of the q values do we see two distinct relaxation times. At small spatial scales relaxations are still detectable at temperatures far below Tg. The temperature dependence of these relaxation times strongly resembles the beta-relaxation process observed in pure PMMA.
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Affiliation(s)
- Bela Farago
- Institute Laue Langevin, POB 156X 38042 Grenoble, France.
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25
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Genix AC, Arbe A, Alvarez F, Colmenero J, Willner L, Richter D. Dynamics of poly(ethylene oxide) in a blend with poly(methyl methacrylate): a quasielastic neutron scattering and molecular dynamics simulations study. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:031808. [PMID: 16241474 DOI: 10.1103/physreve.72.031808] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2005] [Revised: 06/20/2005] [Indexed: 05/05/2023]
Abstract
In this paper, we have addressed the question of the dynamic miscibility in a blend characterized by very different glass-transition temperatures, Tg, for the components: poly(ethylene oxide) and poly(methyl methacrylate) (PEO/PMMA). The combination of quasielastic neutron scattering with isotopic labeling and fully atomistic molecular dynamics simulations has allowed us to selectively investigate the dynamics of the two components in the picosecond-10 nanoseconds scale at temperatures close and above the Tg of the blend. The main focus was on the PEO component, i.e., that of the lowest Tg, but first we have characterized the dynamics of the other component in the blend and of the pure PEO homopolymer as reference. In the region investigated, the dynamics of PMMA in the blend is strongly affected by the alpha-methyl rotation; an additional process detected in the experimental window 65 K above the blend-Tg can be identified as the merged alphabeta process of this component that shows strong deviations from Gaussian behavior. On the other hand, pure PEO displays entropy driven dynamics up to very large momentum transfers. Such kind of motion seems to freeze when the PEO chains are in the blend. There, we have directly observed a very heterogeneous and moreover confined dynamics for the PEO component. The presence of the hardly moving PMMA matrix leads to the creation of little pockets of mobility where PEO can move. The characteristic size of such confined islands of mobility might be estimated to be of approximately 1 nm. These findings are corroborated by the simulation study, which has been an essential support and guide in our data analysis procedure.
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Affiliation(s)
- A-C Genix
- Donostia International Physics Center, Paseo Manuel de Lardizabal 4, 20018 San Sebastián, Spain
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26
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27
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Ding Y, Novikov VN, Sokolov AP, Casalini R, Roland CM. Observation of Chain Dynamics in Depolarized Light Scattering Spectra of Polymers. Macromolecules 2004. [DOI: 10.1021/ma048718c] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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28
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Saalwächter K, Kleinschmidt F, Sommer JU. Swelling Heterogeneities in End-Linked Model Networks: A Combined Proton Multiple-Quantum NMR and Computer Simulation Study. Macromolecules 2004. [DOI: 10.1021/ma048803k] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Kay Saalwächter
- Institut für Makromolekulare Chemie, Universität Freiburg, Stefan-Meier-Str. 31, D-79104 Freiburg, Germany
| | - Felix Kleinschmidt
- Institut für Makromolekulare Chemie, Universität Freiburg, Stefan-Meier-Str. 31, D-79104 Freiburg, Germany
| | - Jens-Uwe Sommer
- Institut de Chimie des Surfaces et Interfaces (CNRS), 15, rue Jean Starcky, F-68057 Mulhouse Cedex, France
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29
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Mattice WL, Helfer CA, Sokolov AP. Persistence Length and Finite Chain Length Effect on Characteristic Ratios. Macromolecules 2004. [DOI: 10.1021/ma035846c] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Wayne L. Mattice
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
| | - Carin A. Helfer
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
| | - Alexei P. Sokolov
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
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30
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Yaneva J, Milchev A, Binder K. Polymer nanodroplets forming liquid bridges in chemically structured slit pores: A computer simulation. J Chem Phys 2004; 121:12632-9. [PMID: 15606288 DOI: 10.1063/1.1826037] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Using a coarse-grained bead-spring model of flexible polymer chains, the structure of a polymeric nanodroplet adsorbed on a chemically decorated flat wall is investigated by means of molecular dynamics simulation. We consider sessile drops on a lyophilic (attractive for the monomers) region of circular shape with radius R(D) while the remaining part of the substrate is lyophobic. The variation of the droplet shape, including its contact angle, with R(D) is studied, and the density profiles across these droplets also are obtained. In addition, the interaction of droplets adsorbed on two walls forming a slit pore with two lyophilic circular regions just opposite of one another is investigated, paying attention to the formation of a liquid bridge between both walls. A central result of our study is the measurement of the force between the two substrate walls at varying wall separation as well as the kinetics of droplet merging. Our results are compared to various phenomenological theories developed for liquid droplets of mesoscopic rather than nanoscopic size.
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Affiliation(s)
- Jacqueline Yaneva
- Institute for Physical Chemistry, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
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31
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Ding Y, Sokolov AP. Comment on the dynamic bead size and Kuhn segment length in polymers: Example of polystyrene. ACTA ACUST UNITED AC 2004. [DOI: 10.1002/polb.20235] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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32
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Mattice WL, Helfer CA, Sokolov AP. On the Relationship between the Characteristic Ratio of a Finite Chain, Cn, and the Asymptotic Limit, C∞. Macromolecules 2003. [DOI: 10.1021/ma0304527] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Wayne L. Mattice
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
| | - Carin A. Helfer
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
| | - Alexei P. Sokolov
- Institute of Polymer Science, The University of Akron, Akron, Ohio 44325-3909
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33
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Affiliation(s)
- Yifu Ding
- Department of Polymer Science, University of Akron, Akron, Ohio 44325-3909
| | - A. Kisliuk
- Department of Polymer Science, University of Akron, Akron, Ohio 44325-3909
| | - A. P. Sokolov
- Department of Polymer Science, University of Akron, Akron, Ohio 44325-3909
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34
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Arrighi V, Gagliardi S, Zhang C, Ganazzoli F, Higgins JS, Ocone R, Telling MTF. A Unified Picture of the Local Dynamics of Poly(dimethylsiloxane) across the Melting Point. Macromolecules 2003. [DOI: 10.1021/ma034843x] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Valeria Arrighi
- Chemistry, School of Engineering and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, UK
| | - Simona Gagliardi
- Chemistry, School of Engineering and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, UK
| | - Chuhong Zhang
- Chemistry, School of Engineering and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, UK
| | - Fabio Ganazzoli
- Dipartimento di Chimica, Materiali e Ing. Chimica “Giulio Natta“, Sez. Chimica Politecnico di Milano via L. Mancinelli 7, 20131 Milano, Italy
| | - Julia S. Higgins
- Department of Chemical Engineering and Chemical Technology, Imperial College, South Kensington Campus, London, SW7 2AZ, UK
| | - Raffaella Ocone
- Chemical Engineering, School of Engineering and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, UK
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35
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Intermediate length scale dynamics in glass forming polymers: coherent and incoherent quasielastic neutron scattering results on polyisobutylene. Chem Phys 2003. [DOI: 10.1016/s0301-0104(03)00095-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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36
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Frick B, Dosseh G, Cailliaux A, Alba-Simionesco C. Pressure dependence of the segmental relaxation of polybutadiene and polyisobutylene and influence of molecular weight. Chem Phys 2003. [DOI: 10.1016/s0301-0104(03)00236-2] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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37
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Somoza MM, Sluch MI, Berg MA. Torsional Relaxation and Friction on the Nanometer Length Scale: Comparison of Small-Molecule Rotation in Poly(dimethylsiloxane) and Poly(isobutylene). Macromolecules 2003. [DOI: 10.1021/ma021181n] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Mark M. Somoza
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
| | - Mikhail I. Sluch
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
| | - Mark A. Berg
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
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38
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Arrighi V, Ganazzoli F, Zhang C, Gagliardi S. New interpretation of local dynamics of poly(dimethyl siloxane) observed by quasielastic neutron scattering. PHYSICAL REVIEW LETTERS 2003; 90:058301. [PMID: 12633401 DOI: 10.1103/physrevlett.90.058301] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2002] [Indexed: 05/24/2023]
Abstract
Synthetic and natural polymers have complex dynamic behavior with distinct motions taking place on a wide range of time and length scales. For poly(dimethyl siloxane) we show that, at temperatures above the melting point, the reorientation of the CH3 groups provides a non-negligible contribution to the incoherent dynamic structure factor. Analysis of the quasielastic neutron scattering data is carried out using a model function that includes fast rotational motion of the CH3 groups and local conformational transitions between isomeric states. By using this model, detailed comparison between experimental data and theoretical predictions at distances where deviations from the traditional Rouse model are expected becomes possible.
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Affiliation(s)
- Valeria Arrighi
- Department of Chemistry, Heriot-Watt University, EH14 4AS Edinburgh, United Kingdom.
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39
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Funayama K, Imae T, Seto H, Aoi K, Tsutsumiuchi K, Okada M, Nagao M, Furusaka M. Fast and Slow Dynamics of Water-Soluble Dendrimers Consisting of Amido-Amine Repeating Units by Neutron Spin−Echo. J Phys Chem B 2003. [DOI: 10.1021/jp0269874] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Katsuya Funayama
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Toyoko Imae
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Hideki Seto
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Keigo Aoi
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Kaname Tsutsumiuchi
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Masahiko Okada
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Michihiro Nagao
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
| | - Michihiro Furusaka
- Graduate School of Science and Research Center for Materials Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan, Faculty of Integrated Arts and Sciences, Hiroshima University, Higashihiroshima 739-8521, Japan, Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan, Institute for Solid State Physics, The University of Tokyo, Tokai 319-1106, Japan, and Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801,
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40
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Sluch MI, Somoza MM, Berg MA. Friction on Small Objects and the Breakdown of Hydrodynamics in Solution: Rotation of Anthracene in Poly(isobutylene) from the Small-Molecule to Polymer Limits. J Phys Chem B 2002. [DOI: 10.1021/jp025549u] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mikhail I. Sluch
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
| | - Mark M. Somoza
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
| | - Mark A. Berg
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208
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41
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Poirier MG, Marko JF. Effect of internal friction on biofilament dynamics. PHYSICAL REVIEW LETTERS 2002; 88:228103. [PMID: 12059455 DOI: 10.1103/physrevlett.88.228103] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2001] [Indexed: 05/23/2023]
Abstract
We consider biofilaments-flexible multimolecule structures common in cell biology-and show how "internal" friction associated with either conformational fluctuations or with fluid flow through narrow pores inside the filaments can dominate the external hydrodynamic friction usually considered to be the main energy dissipation process. The signature of this is wave-number-independent relaxation time of bending fluctuations. Preliminary experimental data for bending fluctuations of single folded (mitotic) chromosomes display these dynamics.
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Affiliation(s)
- Michael G Poirier
- University of Illinois at Chicago, 845 West Taylor Street, Chicago, Illinois 60607-7059, USA
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42
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Farago B, Arbe A, Colmenero J, Faust R, Buchenau U, Richter D. Intermediate length scale dynamics of polyisobutylene. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2002; 65:051803. [PMID: 12059584 DOI: 10.1103/physreve.65.051803] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2001] [Indexed: 05/23/2023]
Abstract
We report on a neutron spin echo investigation of the intermediate scale dynamics of polyisobutylene studying both the self-motion and the collective motion. The momentum transfer (Q) dependences of the self-correlation times are found to follow a Q(-2/beta) law in agreement with the picture of Gaussian dynamics. In the full Q range of observation, their temperature dependence is weaker than the rheological shift factor. The same is true for the stress relaxation time as seen in sound wave absorption. The collective times show both temperature dependences; at the structure factor peak, they follow the temperature dependence of the viscosity, but below the peak, one finds the stress relaxation behavior.
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Affiliation(s)
- B Farago
- Institut Laue-Langevin, 156X, 38042 Grenoble Cedex, France
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43
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Krushev S, Paul W, Smith GD. The Role of Internal Rotational Barriers in Polymer Melt Chain Dynamics. Macromolecules 2002. [DOI: 10.1021/ma0115794] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- S. Krushev
- Institut für Physik, Johannes-Gutenberg-Universität, Staudingerweg 7, D-55099 Mainz, Germany
| | - W. Paul
- Institut für Physik, Johannes-Gutenberg-Universität, Staudingerweg 7, D-55099 Mainz, Germany
| | - G. D. Smith
- Department of Materials Science and Engineering and Department of Chemical and Fuels Engineering, University of Utah, 122 S. Central Campus Dr. Rm. 304, Salt Lake City, Utah 84112
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44
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Richter D, Monkenbusch M, Willner L, Wischnewski A, Arbe A, Colmenero J. Experimental aspects of polymer dynamics. POLYM INT 2002. [DOI: 10.1002/pi.908] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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45
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Bu Z, Cook J, Callaway DJ. Dynamic regimes and correlated structural dynamics in native and denatured alpha-lactalbumin. J Mol Biol 2001; 312:865-73. [PMID: 11575938 DOI: 10.1006/jmbi.2001.5006] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Understanding the mechanisms of protein folding requires knowledge of both the energy landscape and the structural dynamics of a protein. We report a neutron-scattering study of the nanosecond and picosecond dynamics of native and the denatured alpha-lactalbumin. The quasielastic scattering intensity shows that there are alpha-helical structure and tertiary-like side-chain interactions fluctuating on sub-nanosecond time-scales under extremely denaturing conditions and even in the absence of disulfide bonds. Based on the length-scale dependence of the decay rate of the measured correlation functions, the nanosecond dynamics of the native and the variously denatured proteins have three dynamic regimes. When 0.05<Q<0.5 A(-1) (where the scattering vector, Q, is inversely proportional to the length-scale), the decay rate, Gamma, shows a power law relationship, Gamma proportional to Q(2.42+/-0.08), that is analogous to the dynamic behavior of a random coil. However, when 0.5<Q<1.0 A(-1), the decay rate exhibits a Gamma proportional to Q(1.0+/-0.2) relationship. The effective diffusion constant of the protein decreases with increasing Q, a striking dynamic behavior that is not found in any chain-like macromolecule. We suggest that this unusual dynamics is due to the presence of a strongly attractive force and collective conformational fluctuations in both the native and the denatured states of the protein. Above Q>1.0 A(-1) is a regime that displays the local dynamic behavior of individual residues, Gamma proportional to Q(1.8+/-0.3). The picosecond time-scale dynamics shows that the potential barrier to side-chain proton jump motion is reduced in the molten globule and in the denatured proteins when compared to that of the native protein. Our results provide a dynamic view of the native-like topology established in the early stages of protein folding.
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Affiliation(s)
- Z Bu
- NIST Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, MD 20899-8562, USA.
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