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Yang J, Sato T. Conformation of Pullulan in Aqueous Solution Studied by Small-Angle X-Ray Scattering. Polymers (Basel) 2020; 12:polym12061266. [PMID: 32492916 PMCID: PMC7362014 DOI: 10.3390/polym12061266] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 05/31/2020] [Accepted: 06/01/2020] [Indexed: 12/03/2022] Open
Abstract
Small-angle X-ray scattering functions were measured for six pullulan samples with molecular weights ranging from 2.3 × 104 to 7.4 × 105 in 0.05 M aqueous NaCl at 25 °C and fitted by the perturbed wormlike chain model, comprising touched-bead sub-bodies, to obtain wormlike chain parameters. The parameter values determined were consistent with those determined from previously reported dilute solution properties of aqueous pullulan. Because radii of gyration of not only pullulan polymers, but also pullulan oligomers were consistently explained by the touched-bead wormlike chain model perturbed by the excluded volume effect, the pullulan chain takes a local conformation considerably different from the amylose chain, although both polysaccharides are flexible polymers with an approximately same characteristic ratio.
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2
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The size and shape of three water-soluble, non-ionic polysaccharides produced by lactic acid bacteria: A comparative study. Carbohydr Polym 2016; 142:91-7. [DOI: 10.1016/j.carbpol.2016.01.029] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2015] [Revised: 01/06/2016] [Accepted: 01/13/2016] [Indexed: 11/21/2022]
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3
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Non-biofouling property of well-defined concentrated polymer brushes. Colloids Surf B Biointerfaces 2015; 127:213-20. [DOI: 10.1016/j.colsurfb.2015.01.026] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2014] [Revised: 11/12/2014] [Accepted: 01/19/2015] [Indexed: 11/18/2022]
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4
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Conformation and physical properties of cycloisomaltooligosaccharides in aqueous solution. Carbohydr Polym 2014; 99:432-7. [DOI: 10.1016/j.carbpol.2013.07.089] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2013] [Revised: 07/18/2013] [Accepted: 07/26/2013] [Indexed: 11/21/2022]
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5
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Spectroscopic characterization of bioactive Cu(II) complexes with polysaccharides by modern FTIR microspectroscopy. HEMIJSKA INDUSTRIJA 2010. [DOI: 10.2298/hemind1001009m] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Investigations of bioactive copper complexes are of great interest for the pharmaceutical industry from the aspect of therapy of hypochromic microcitary anemia and hypocupremia. The structure of bioactive copper complexes with oligosaccharides has not yet been explained in details despite a number of studies. This work represents further development in the research of the complex structure and pharmacobiological activity of the copper complexes. Different copper complexes with dextran and pullulan oligosaccharides, as well as reduced derivatives, have been analyzed by IR spectroscopy. Characterization of the complexes has been performed by using modern spectroscopic techniques: RT-FTIR, LNT-FTIR, D2O-FTIR, ATR-FTIR and FTIR microspectroscopy. Results of FTIR microspectroscopic investigations show that the structural form of complexes and copper content depend considerably on constitution and ligands conformation, degree of crystallinity, polymerization, polydispersity, and linearity of macromolecules. Also, stability of the synthesized complexes, as well as their pharmacological effect, depend on these parameters. Based on IR testing results, structures of the synthesized Cu(II) complexes with polysaccharides were confirmed.
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Dogsa I, Štrancar J, Laggner P, Stopar D. Efficient modeling of polysaccharide conformations based on Small-Angle X-ray Scattering experimental data. POLYMER 2008. [DOI: 10.1016/j.polymer.2008.01.043] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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7
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Yoshikawa C, Goto A, Ishizuka N, Nakanishi K, Kishida A, Tsujii Y, Fukuda T. Size-Exclusion Effect and Protein Repellency of Concentrated Polymer Brushes Prepared by Surface-Initiated Living Radical Polymerization. ACTA ACUST UNITED AC 2007. [DOI: 10.1002/masy.200750220] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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8
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Yoshikawa C, Goto A, Tsujii Y, Ishizuka N, Nakanishi K, Fukuda T. Surface interaction of well-defined, concentrated poly(2-hydroxyethyl methacrylate) brushes with proteins. ACTA ACUST UNITED AC 2007. [DOI: 10.1002/pola.22224] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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9
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Yoshikawa C, Goto A, Tsujii Y, Fukuda T, Kimura T, Yamamoto K, Kishida A. Protein Repellency of Well-Defined, Concentrated Poly(2-hydroxyethyl methacrylate) Brushes by the Size-Exclusion Effect. Macromolecules 2006. [DOI: 10.1021/ma0520242] [Citation(s) in RCA: 182] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Chiaki Yoshikawa
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Atsushi Goto
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Yoshinobu Tsujii
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Takeshi Fukuda
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Tsuyoshi Kimura
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Kazuya Yamamoto
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
| | - Akio Kishida
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan; Department of Nanostructured and Advanced Materials, Graduate School of Science and Engineering, Kagoshima University, 1-21140 Korimoto, Kagoshima 890-0065, Japan; and Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan
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10
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Harding SE. Challenges for the modern analytical ultracentrifuge analysis of polysaccharides. Carbohydr Res 2005; 340:811-26. [PMID: 15780247 DOI: 10.1016/j.carres.2005.01.027] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2004] [Accepted: 01/12/2005] [Indexed: 11/29/2022]
Abstract
This article reviews some of the recent advances in analytical ultracentrifugation and how these advances have impacted--and can impact--on our understanding of the size, shape through conformation modelling, interactions and charge properties of polysaccharides in solution, particularly when used in combination with other solution techniques and also imaging techniques. Specifically we look at (1) polysaccharide polydispersity and simple shape analysis by sedimentation velocity, and in particular using new approaches such as SEDFIT analysis; (2) polysaccharide molecular-weight analysis by sedimentation equilibrium and MSTAR analysis and how this complements analysis of size exclusion chromatography coupled to multi-angle laser light scattering; (3) polysaccharide conformation analysis using traditional procedures such as the Wales-van Holde ratio, power law or 'scaling' relations, more specialised treatments for rigid cylindrical structures, semi-flexible chains and worm-like coils and complications through draining effects; (4) Analysis of polysaccharide interactions and in particular complex formation phenomena, focusing on interesting applications in the areas of mucoadhesion and sedimentation fingerprinting; and (5) the possibilities for macromolecular charge and charge screening measurement.
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Affiliation(s)
- Stephen E Harding
- NCMH Physical Biochemistry Laboratory, University of Nottingham, School of Biosciences, Sutton Bonington LE12 5RD, UK.
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11
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Paradossi G, Cavalieri F, Chiessi E. Proton fluctuations and water diffusion in dextran chemical hydrogels studied by incoherent elastic and quasielastic neutron scattering. Carbohydr Res 2005; 340:921-7. [PMID: 15780257 DOI: 10.1016/j.carres.2005.01.023] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2004] [Accepted: 12/31/2004] [Indexed: 10/25/2022]
Abstract
Proton fluctuations reporting local motions of the glycosidic linkages of chemically crosslinked dextran hydrogels with well defined pore-size distributions are studied by static and dynamic neutron-scattering approaches. The dependence of the dynamic behaviour of water on the pore sizes is also discussed.
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Affiliation(s)
- Gaio Paradossi
- Dipartimento di Chimica, Università di Roma Tor Vergata and INFM, via della Ricerca Scientifica, 00133 Roma, Italy.
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12
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Lycknert K, Widmalm G. Dynamics of the Escherichia coli O91 O-Antigen Polysaccharide in Solution as Studied by Carbon-13 NMR Relaxation. Biomacromolecules 2004; 5:1015-20. [PMID: 15132695 DOI: 10.1021/bm0345108] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The dynamics of the O-antigen part of the lipopolysaccharide from the enterohemorrhagic Escherichia coli O91 has been determined in solution using (13)C NMR relaxation measurements at two magnetic field strengths, 9.4 and 14.1 T, thereby facilitating the testing of several dynamical models. The biological repeating unit, consisting of five sugar residues and substituents, could be determined by spectral analysis of different (1)H,(13)C correlations and corroborated by the relaxation data. The site specifically (13)C-labeled material was shown to have approximately 10 repeating units with a narrow distribution. A model-free analysis of the relaxation data revealed a complex dynamical behavior where the sugar residues could be described by a global correlation time (tau(m) = 5.4 ns), generalized order parameters (S(2) approximately 0.63), and different correlation times for internal motions related to their position in the repeating unit along the polymer (tau(e) approximately 360-520 ps). One of the sugar residues showed, in addition, a chemical exchange contribution. Furthermore, a substituent on another sugar residue was described by two order parameters (S(f)(2) = 0.51 and S(s)(2) = 0.21). The solution dynamics of the polysaccharide are thus described by highly intricate motions, both in amplitude and time scales. These results are of significance in the general description of polysaccharides surrounding bacterial cell surfaces and in the presentation of antigenic epitopes to the immune system of an invaded host.
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Affiliation(s)
- Kristina Lycknert
- Department of Organic Chemistry, Stockholm University, S-106 91 Stockholm, Sweden
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13
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Campa C, Oust A, Skjåk-Braek G, Paulsen BS, Paoletti S, Christensen BE, Ballance S. Determination of average degree of polymerisation and distribution of oligosaccharides in a partially acid-hydrolysed homopolysaccharide: A comparison of four experimental methods applied to mannuronan. J Chromatogr A 2004; 1026:271-81. [PMID: 14763754 DOI: 10.1016/j.chroma.2003.11.045] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
The average degree of polymerisation (DP) and distribution of oligosaccharides in partially acid hydrolysed mannuronans were quantitatively evaluated by 1H NMR, electrospray ionisation mass spectrometry (ESI-MS), micellar electrokinetic capillary chromatography with UV detection (MEKC-UV), and high-pressure anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Our investigation shows that 1H NMR, MEKC-UV and, in particular, HPAEC-PAD can be used as quantitative tools to aid the investigation of polysaccharide structure, function and synthesis. For the latter two techniques, especially, this represents a significant new development as it enables calculation of the quantity of individual oligomers of nominal DP by direct analysis of a defined oligomer mixture. Appropriate statistical averages of number and weight distributions were also calculated and found to fit very well to predicted Kuhn distributions that assume random depolymerisation.
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Affiliation(s)
- Cristiana Campa
- Department of Biochemistry, Biophysics and Macromolecular Chemistry University of Trieste, 1-34127 Trieste, Italy
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14
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Shingel KI. Current knowledge on biosynthesis, biological activity, and chemical modification of the exopolysaccharide, pullulan. Carbohydr Res 2004; 339:447-60. [PMID: 15013381 DOI: 10.1016/j.carres.2003.10.034] [Citation(s) in RCA: 179] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2003] [Accepted: 10/23/2003] [Indexed: 10/26/2022]
Abstract
The article presents an overview of the latest advances in investigations of the biosynthesis, molecular properties, and associated biological activity of pullulan. The literature survey on the pullulan biosynthesis is intended to illustrate how the great variety of environmental conditions as well as variability in strain characteristics influences the metabolic pathways of the pullulan formation and effects structural composition of the biopolymer. Molecular properties of pullulan as alpha-(1-->4)- and alpha-(1-->6)-glucan are discussed in terms of similarities with amylose and dextran structures, and an emphasis is made on the inherent biological activity of pullulan molecules. The author also attempts to summarize the concepts, options, and strategies in chemical modification of the biopolymer and to delineate future prospects in designing new biologically active derivatives.
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Affiliation(s)
- Kirill I Shingel
- Bioartificial Gel Technologies Inc, 400 Maisonneuve Ouest, suite 1156, Montreal, Quebec, Canada H3A 1L4.
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15
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Dais P, Vlachou S, Taravel FR. (13)C nuclear magnetic relaxation study of segmental dynamics of the heteropolysaccharide pullulan in dilute solutions. Biomacromolecules 2003; 2:1137-47. [PMID: 11777385 DOI: 10.1021/bm010073q] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
(13)C spin-lattice relaxation times (T(1)) and nuclear Overhauser enhancements (NOE) were measured as a function of temperature and magnetic field strength for the heteropolysaccharide pullulan in two solvents, water and dimethyl sulfoxide. The relaxation data of the endocyclic ring carbons were successfully interpreted in terms of chain segmental motions by using the bimodal time-correlation function of Dejean de la Batie, Laupretre, and Monnerie. On the basis of the calculated correlation times for segmental motion, the flexibilities of the pullulan chain at a repeat-unit level have been studied and compared with the segmental mobility of the homopolysaccharides amylose and dextran in the same solvents. The internal rotation of the free hydroxymethyl groups about the exocyclic C-5 [bond] C-6 bonds superimposed on segmental motion has been described as a diffusion process of restricted amplitude. The rate and amplitude of the internal rotation of the free hydroxymethyl groups were not affected by the local geometry of the pullulan chain.
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Affiliation(s)
- P Dais
- NMR Laboratory, Department of Chemistry, University of Crete, Iraklion, Crete, Greece.
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16
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Shingel KI. Determination of structural peculiarities of dexran, pullulan and gamma-irradiated pullulan by Fourier-transform IR spectroscopy. Carbohydr Res 2002; 337:1445-51. [PMID: 12204605 DOI: 10.1016/s0008-6215(02)00209-4] [Citation(s) in RCA: 200] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Deconvoluted IR-absorbance spectra of dextran, pullulan and gamma-irradiated pullulan were analyzed in order to find the most specific spectral peculiarities that allow one to obtain information about the structure and conformation of these macromolecules in solvents that exhibit different influences on the system of intra- and intermolecular interactions. The changes in intensity and width of the IR bands at about 1040, 1020 and, in the case of pullulan, also at 996 cm(-1), were related to changes in conformation and short-range interactions of the polysaccharides. Furthermore, certain bands within the 1200-900 cm(-1) region were considered as a characteristic for the type of glycosidic linkage. The results of the FTIR spectroscopy study allowed one to suggest a predominant cleavage of the alpha-(1-->4) linkages upon the radiation-chemical destruction of pullulan.
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Affiliation(s)
- Kirill I Shingel
- Institute of Inorganic Chemistry, National Academy of Sciences of Belarus, 220072, Minsk, Belarus.
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17
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Liu JHY, Brameld KA, Brant DA, Goddard WA. Conformational analysis of aqueous pullulan oligomers: an effective computational approach. POLYMER 2002. [DOI: 10.1016/s0032-3861(01)00420-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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18
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Shimada J, Kaneko H, Takada T, Kitamura S, Kajiwara K. Conformation of Amylose in Aqueous Solution: Small-Angle X-ray Scattering Measurements and Simulations. J Phys Chem B 2000. [DOI: 10.1021/jp992650z] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jiro Shimada
- Fundamental Research Laboratories, NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki 305-8501, Japan, Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan, Faculty of Engineering and Design, Kyoto Institute of Technology, Matsugasaki, Kyoto 606-8585, Japan
| | - Hiroki Kaneko
- Fundamental Research Laboratories, NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki 305-8501, Japan, Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan, Faculty of Engineering and Design, Kyoto Institute of Technology, Matsugasaki, Kyoto 606-8585, Japan
| | - Toshikazu Takada
- Fundamental Research Laboratories, NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki 305-8501, Japan, Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan, Faculty of Engineering and Design, Kyoto Institute of Technology, Matsugasaki, Kyoto 606-8585, Japan
| | - Shinichi Kitamura
- Fundamental Research Laboratories, NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki 305-8501, Japan, Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan, Faculty of Engineering and Design, Kyoto Institute of Technology, Matsugasaki, Kyoto 606-8585, Japan
| | - Kanji Kajiwara
- Fundamental Research Laboratories, NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki 305-8501, Japan, Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan, Faculty of Engineering and Design, Kyoto Institute of Technology, Matsugasaki, Kyoto 606-8585, Japan
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Abstract
Recently, atomic force microscopy has been used to image a variety of polysaccharides and map their distribution on cell surfaces. The mechanical response of polysaccharides to tensile stress has been investigated in single-molecule force spectroscopy experiments. Small-angle X-ray scattering has provided a probe of polysaccharide structure operating in a size range (2-25 nm) that is intermediate between those accessible using nuclear magnetic resonance and light scattering.
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Affiliation(s)
- D A Brant
- Department of Chemistry, University of California, Irvine, CA 92697-2025, USA.
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