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For: Dumont C, Emilsson T, Gruebele M. Reaching the protein folding speed limit with large, sub-microsecond pressure jumps. Nat Methods 2009;6:515-9. [PMID: 19483692 DOI: 10.1038/nmeth.1336] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2009] [Accepted: 04/13/2009] [Indexed: 11/08/2022]
Number Cited by Other Article(s)
1
Grosskopf JD, Sidabras JW, Altenbach C, Anderson JR, Mett RR, Strangeway RA, Hyde JS, Hubbell WL, Lerch MT. A pressure-jump EPR system to monitor millisecond conformational exchange rates of spin-labeled proteins. Protein Sci 2024;33:e5220. [PMID: 39565088 PMCID: PMC11577460 DOI: 10.1002/pro.5220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Revised: 10/24/2024] [Accepted: 10/25/2024] [Indexed: 11/21/2024]
2
Grosskopf JD, Sidabras JW, Altenbach C, Anderson JR, Mett RR, Strangeway RA, Hyde JS, Hubbell WL, Lerch MT. A pressure-jump EPR system to monitor millisecond conformational exchange rates of spin-labeled proteins. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.05.07.593074. [PMID: 38766191 PMCID: PMC11100676 DOI: 10.1101/2024.05.07.593074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
3
Grünbein ML, Gorel A, Foucar L, Carbajo S, Colocho W, Gilevich S, Hartmann E, Hilpert M, Hunter M, Kloos M, Koglin JE, Lane TJ, Lewandowski J, Lutman A, Nass K, Nass Kovacs G, Roome CM, Sheppard J, Shoeman RL, Stricker M, van Driel T, Vetter S, Doak RB, Boutet S, Aquila A, Decker FJ, Barends TRM, Stan CA, Schlichting I. Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet. Nat Commun 2021;12:1672. [PMID: 33723266 PMCID: PMC7960726 DOI: 10.1038/s41467-021-21819-8] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Accepted: 02/15/2021] [Indexed: 01/31/2023]  Open
4
Ando N, Barquera B, Bartlett DH, Boyd E, Burnim AA, Byer AS, Colman D, Gillilan RE, Gruebele M, Makhatadze G, Royer CA, Shock E, Wand AJ, Watkins MB. The Molecular Basis for Life in Extreme Environments. Annu Rev Biophys 2021;50:343-372. [PMID: 33637008 DOI: 10.1146/annurev-biophys-100120-072804] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
5
Hofmann SM, Frost CV, Podewin T, Gailer M, Weber E, Zacharias M, Zinth W, Hoffmann-Röder A. Folding and Unfolding of the Short Light-Triggered β-Hairpin Peptide AzoChignolin Occurs within 100 ns. J Phys Chem B 2020;124:5113-5121. [PMID: 32479079 DOI: 10.1021/acs.jpcb.0c02021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Jiang X, Wu Z, Fan Z, Yin J, Zheng L. A new way to recognize downhill folding based on generalized path length. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2020. [DOI: 10.1142/s0219633620400052] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
7
Syzonenko I, Phillips JL. Accelerated Protein Folding Using Greedy-Proximal A*. J Chem Inf Model 2020;60:3093-3104. [DOI: 10.1021/acs.jcim.9b01194] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
8
Winogradoff D, John S, Aksimentiev A. Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly. NANOSCALE 2020;12:5422-5434. [PMID: 32080694 PMCID: PMC7291819 DOI: 10.1039/c9nr09135a] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
9
Fast pressure-jump all-atom simulations and experiments reveal site-specific protein dehydration-folding dynamics. Proc Natl Acad Sci U S A 2019;116:5356-5361. [PMID: 30837309 DOI: 10.1073/pnas.1814927116] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
10
Röder K, Joseph JA, Husic BE, Wales DJ. Energy Landscapes for Proteins: From Single Funnels to Multifunctional Systems. ADVANCED THEORY AND SIMULATIONS 2019. [DOI: 10.1002/adts.201800175] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
11
Charlier C, Courtney JM, Anfinrud P, Bax A. Interrupted Pressure-Jump NMR Experiments Reveal Resonances of On-Pathway Protein Folding Intermediate. J Phys Chem B 2018;122:11792-11799. [PMID: 30256104 DOI: 10.1021/acs.jpcb.8b08456] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
12
Dupuis NF, Holmstrom ED, Nesbitt DJ. Tests of Kramers’ Theory at the Single-Molecule Level: Evidence for Folding of an Isolated RNA Tertiary Interaction at the Viscous Speed Limit. J Phys Chem B 2018;122:8796-8804. [DOI: 10.1021/acs.jpcb.8b04014] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
13
Charlier C, Courtney JM, Alderson TR, Anfinrud P, Bax A. Monitoring 15N Chemical Shifts During Protein Folding by Pressure-Jump NMR. J Am Chem Soc 2018;140:8096-8099. [PMID: 29923716 DOI: 10.1021/jacs.8b04833] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
14
Kraack JP. Ultrafast structural molecular dynamics investigated with 2D infrared spectroscopy methods. Top Curr Chem (Cham) 2017;375:86. [PMID: 29071445 DOI: 10.1007/s41061-017-0172-1] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 10/02/2017] [Indexed: 12/23/2022]
15
Lapidus LJ. Protein unfolding mechanisms and their effects on folding experiments. F1000Res 2017;6:1723. [PMID: 29034084 PMCID: PMC5615768 DOI: 10.12688/f1000research.12070.1] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 09/23/2017] [Indexed: 12/21/2022]  Open
16
Directly monitor protein rearrangement on a nanosecond-to-millisecond time-scale. Sci Rep 2017;7:8691. [PMID: 28821738 PMCID: PMC5562898 DOI: 10.1038/s41598-017-08385-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2017] [Accepted: 07/10/2017] [Indexed: 11/09/2022]  Open
17
Si W, Aksimentiev A. Nanopore Sensing of Protein Folding. ACS NANO 2017;11:7091-7100. [PMID: 28693322 PMCID: PMC5564329 DOI: 10.1021/acsnano.7b02718] [Citation(s) in RCA: 108] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
18
When fast is better: protein folding fundamentals and mechanisms from ultrafast approaches. Biochem J 2017;473:2545-59. [PMID: 27574021 PMCID: PMC5003694 DOI: 10.1042/bcj20160107] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Accepted: 04/18/2016] [Indexed: 11/19/2022]
19
Jiao J, Rebane AA, Ma L, Zhang Y. Single-Molecule Protein Folding Experiments Using High-Precision Optical Tweezers. Methods Mol Biol 2017;1486:357-390. [PMID: 27844436 DOI: 10.1007/978-1-4939-6421-5_14] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
20
Möller J, Léonardon J, Gorini J, Dattani R, Narayanan T. A sub-ms pressure jump setup for time-resolved X-ray scattering. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2016;87:125116. [PMID: 28040915 DOI: 10.1063/1.4972296] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
21
Quérard J, Le Saux T, Gautier A, Alcor D, Croquette V, Lemarchand A, Gosse C, Jullien L. Kinetics of Reactive Modules Adds Discriminative Dimensions for Selective Cell Imaging. Chemphyschem 2016;17:1396-413. [PMID: 26833808 DOI: 10.1002/cphc.201500987] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Indexed: 11/07/2022]
22
Gianni S, Dogan J, Jemth P. Coupled binding and folding of intrinsically disordered proteins: what can we learn from kinetics? Curr Opin Struct Biol 2016;36:18-24. [DOI: 10.1016/j.sbi.2015.11.012] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2015] [Revised: 11/13/2015] [Accepted: 11/26/2015] [Indexed: 12/16/2022]
23
McCarthy N, Brooks N. Using High Pressure to Modulate Lateral Structuring in Model Lipid Membranes. ADVANCES IN BIOMEMBRANES AND LIPID SELF-ASSEMBLY 2016. [DOI: 10.1016/bs.abl.2016.04.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
24
van Wilderen LJGW, Bredenbeck J. Von ultraschnellen Strukturbestimmungen bis zum Steuern von Reaktionen: mehrdimensionale gemischte IR/nicht-IR-Schwingungsspektroskopie. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503155] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
25
van Wilderen LJGW, Bredenbeck J. From Ultrafast Structure Determination to Steering Reactions: Mixed IR/Non-IR Multidimensional Vibrational Spectroscopies. Angew Chem Int Ed Engl 2015;54:11624-40. [PMID: 26394274 DOI: 10.1002/anie.201503155] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2015] [Indexed: 12/27/2022]
26
Best RB, Miller C, Mittal J. Role of solvation in pressure-induced helix stabilization. J Chem Phys 2015;141:22D522. [PMID: 25494793 DOI: 10.1063/1.4901112] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
27
Fast-folding proteins under stress. Cell Mol Life Sci 2015;72:4273-85. [PMID: 26231095 DOI: 10.1007/s00018-015-2002-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Revised: 07/07/2015] [Accepted: 07/24/2015] [Indexed: 10/23/2022]
28
Wirth AJ, Liu Y, Prigozhin MB, Schulten K, Gruebele M. Comparing Fast Pressure Jump and Temperature Jump Protein Folding Experiments and Simulations. J Am Chem Soc 2015;137:7152-7159. [PMID: 25988868 DOI: 10.1021/jacs.5b02474] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
29
Brooks NJ. Pressure effects on lipids and bio-membrane assemblies. IUCRJ 2014;1:470-7. [PMID: 25485127 PMCID: PMC4224465 DOI: 10.1107/s2052252514019551] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/18/2014] [Accepted: 08/28/2014] [Indexed: 05/06/2023]
30
Guzman I, Gruebele M. Protein Folding Dynamics in the Cell. J Phys Chem B 2014;118:8459-70. [DOI: 10.1021/jp501866v] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
31
Liu Y, Prigozhin M, Schulten K, Gruebele M. Observation of complete pressure-jump protein refolding in molecular dynamics simulation and experiment. J Am Chem Soc 2014;136:4265-72. [PMID: 24437525 PMCID: PMC3985862 DOI: 10.1021/ja412639u] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2013] [Indexed: 11/29/2022]
32
Fast protein folding kinetics. Q Rev Biophys 2014;47:95-142. [PMID: 24641816 DOI: 10.1017/s003358351400002x] [Citation(s) in RCA: 69] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
33
Fazelinia H, Xu M, Cheng H, Roder H. Ultrafast hydrogen exchange reveals specific structural events during the initial stages of folding of cytochrome c. J Am Chem Soc 2013;136:733-40. [PMID: 24364692 DOI: 10.1021/ja410437d] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
34
Vahidi S, Stocks BB, Liaghati-Mobarhan Y, Konermann L. Submillisecond protein folding events monitored by rapid mixing and mass spectrometry-based oxidative labeling. Anal Chem 2013;85:8618-25. [PMID: 23841479 DOI: 10.1021/ac401148z] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
35
Misplaced helix slows down ultrafast pressure-jump protein folding. Proc Natl Acad Sci U S A 2013;110:8087-92. [PMID: 23620522 DOI: 10.1073/pnas.1219163110] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
36
Perezzan R, Rey A. Simulating protein unfolding under pressure with a coarse-grained model. J Chem Phys 2012;137:185102. [DOI: 10.1063/1.4765057] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
37
Clarke DT. Circular dichroism in protein folding studies. CURRENT PROTOCOLS IN PROTEIN SCIENCE 2012;Chapter 28:28.3.1-28.3.17. [PMID: 23151746 DOI: 10.1002/0471140864.ps2803s70] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
38
Senne M, Trendelkamp-Schroer B, Mey ASJS, Schütte C, Noé F. EMMA: A Software Package for Markov Model Building and Analysis. J Chem Theory Comput 2012;8:2223-38. [PMID: 26588955 DOI: 10.1021/ct300274u] [Citation(s) in RCA: 122] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
39
Gelman H, Platkov M, Gruebele M. Rapid Perturbation of Free-Energy Landscapes: From In Vitro to In Vivo. Chemistry 2012;18:6420-7. [DOI: 10.1002/chem.201104047] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
40
Keller BG, Prinz JH, Noé F. Markov models and dynamical fingerprints: Unraveling the complexity of molecular kinetics. Chem Phys 2012. [DOI: 10.1016/j.chemphys.2011.08.021] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
41
Denos S, Dhar A, Gruebele M. Crowding effects on the small, fast-folding protein lambda6-85. Faraday Discuss 2012;157:451-500. [PMID: 23230782 PMCID: PMC3834863 DOI: 10.1039/c2fd20009k] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2024]
42
Chan HS, Zhang Z, Wallin S, Liu Z. Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models. Annu Rev Phys Chem 2011;62:301-26. [PMID: 21453060 DOI: 10.1146/annurev-physchem-032210-103405] [Citation(s) in RCA: 168] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
43
Sanchez-Ruiz JM. Probing Free-Energy Surfaces with Differential Scanning Calorimetry. Annu Rev Phys Chem 2011;62:231-55. [DOI: 10.1146/annurev-physchem-032210-103504] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
44
Noé F, Doose S, Daidone I, Löllmann M, Sauer M, Chodera JD, Smith JC. Dynamical fingerprints for probing individual relaxation processes in biomolecular dynamics with simulations and kinetic experiments. Proc Natl Acad Sci U S A 2011;108:4822-7. [PMID: 21368203 PMCID: PMC3064371 DOI: 10.1073/pnas.1004646108] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
45
Chen HL, Hsu JCC, Viet MH, Li MS, Hu CK, Liu CH, Luh FY, Chen SSW, Chang ESH, Wang AHJ, Hsu MF, Fann W, Chen RPY. Studying submicrosecond protein folding kinetics using a photolabile caging strategy and time-resolved photoacoustic calorimetry. Proteins 2011;78:2973-83. [PMID: 20737588 DOI: 10.1002/prot.22823] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
46
Brooks NJ, Ces O, Templer RH, Seddon JM. Pressure effects on lipid membrane structure and dynamics. Chem Phys Lipids 2010;164:89-98. [PMID: 21172328 DOI: 10.1016/j.chemphyslip.2010.12.002] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2010] [Revised: 12/07/2010] [Accepted: 12/09/2010] [Indexed: 11/30/2022]
47
Best RB, Mittal J. Protein Simulations with an Optimized Water Model: Cooperative Helix Formation and Temperature-Induced Unfolded State Collapse. J Phys Chem B 2010;114:14916-23. [DOI: 10.1021/jp108618d] [Citation(s) in RCA: 216] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
48
Gruebele M. Protein folding. Methods 2010;52:1-2. [DOI: 10.1016/j.ymeth.2010.08.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/02/2010] [Indexed: 11/29/2022]  Open
49
Iwaoka M, Sano N, Hasegawa N, Yokokawa M, Kunigami S, Shirai H. Structural Transitions and Enzymatic Function of Ribonuclease A Encapsulated in Transparent Porous Silica Gel. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2010. [DOI: 10.1246/bcsj.20090337] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
50
Robinson D, Besley NA, O’Shea P, Hirst JD. Calculating the Fluorescence of 5-Hydroxytryptophan in Proteins. J Phys Chem B 2009;113:14521-8. [DOI: 10.1021/jp9071108] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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