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Han Y, Li M, Ehara M, Zhao X. Unveiling fullerene formation and interconversion through molecular dynamics simulations with deep neural network potentials. Phys Chem Chem Phys 2025; 27:9767-9773. [PMID: 40264288 DOI: 10.1039/d5cp00837a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2025]
Abstract
Utilizing deep neural network potentials within molecular dynamics simulations, this research uncovers insights into fullerene formation and interconversion, particularly during the cooling stage of the annealing process. Our deep learning-enhanced approach effectively models the generation of fullerenes from C2 units in carbon vapor, highlighting the critical role of carbon density in structuring outcomes in a primary iron-carbon system. This study provides differences in molecular dynamics simulations for fullerene generation and also demonstrates the potential of deep learning in investigating complex carbon structures, paving the way for further investigations into the fullerene family.
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Affiliation(s)
- Yanbo Han
- School of Chemistry, State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, Xi'an 710049, China.
| | - Mengyang Li
- School of Physics, Xidian University, Xi'an 710071, China.
| | - Masahiro Ehara
- Research Center for Computational Science, Institute for Molecular Science, Okazaki 444-8585, Japan
| | - Xiang Zhao
- School of Chemistry, State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, Xi'an 710049, China.
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Moreno-Vicente A, Schardt S, Dunk PW, Poblet JM, Rodríguez-Fortea A. Boron-Doped Endohedral Metallofullerenes: Synthesis and Computational Analysis of a Family of Heteroatom-Doped Molecular Carbons. Inorg Chem 2025; 64:1208-1217. [PMID: 39772492 DOI: 10.1021/acs.inorgchem.4c05122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
Abstract
Gas-phase synthesis and detection of boron-doped nitride clusterfullerenes and a large variety of monometallofullerenes have been achieved using a pulsed laser vaporization cluster source. Density functional theory (DFT) calculations show that the electronic structures of boron-doped endohedral metallofullerenes differ from those of the pristine all-carbon cages due to the lack of one electron upon boron substitution. For monometallofullerenes, this is likely the main reason for the somewhat different abundance distribution observed for boron-doped with respect to all-carbon cages. Moreover, the three carbon atoms directly bonded to B show the most negative charges in the cage, and consequently, metal atoms are primarily placed nearby boron.
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Affiliation(s)
- Antonio Moreno-Vicente
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, c/Marcel·lí Domingo 1, 43007 Tarragona, Spain
| | - Sven Schardt
- Department of Chemistry, Technische Universität Darmstadt, Alarich-Weiss-Straße 8, 64287 Darmstadt, Germany
- Karlsruhe Institute of Technology, Institute for Chemical Technology and Polymer Chemistry, Engesserstr. 20, 76131 Karlsruhe, Germany
| | - Paul W Dunk
- National High Magnetic Field Laboratory, Florida State University, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, United States
| | - Josep M Poblet
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, c/Marcel·lí Domingo 1, 43007 Tarragona, Spain
| | - Antonio Rodríguez-Fortea
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, c/Marcel·lí Domingo 1, 43007 Tarragona, Spain
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Yao YR, Chen ZC, Chen L, Zheng SY, Yang S, Deng SL, Echegoyen L, Tan YZ, Xie SY, Zheng LS. Two Metastable Endohedral Metallofullerenes Sc 2C 2@ C1(39656)-C 82 and Sc 2C 2@ C1(51383)-C 84: Direct-C 2-Insertion Products from Their Most Stable Precursors. J Am Chem Soc 2023. [PMID: 37406618 DOI: 10.1021/jacs.3c04840] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/07/2023]
Abstract
Endohedral metallofullerenes (EMFs) are sub-nano carbon materials with diverse applications, yet their formation mechanism, particularly for metastable isomers, remains ambiguous. The current theoretical methods focus mainly on the most stable isomers, leading to limited predictability of metastable ones due to their low stabilities and yields. Herein, we report the successful isolation and characterization of two metastable EMFs, Sc2C2@C1(39656)-C82 and Sc2C2@C1(51383)-C84, which violate the isolated pentagon rule (IPR). These two non-IPR EMFs exhibit a rare case of planar and pennant-like Sc2C2 clusters, which can be considered hybrids of the common butterfly-shaped and linear configurations. More importantly, the theoretical results reveal that despite being metastable, these two non-IPR EMFs survived as the products from their most stable precursors, Sc2C2@C2v(5)-C80 and Sc2C2@Cs(6)-C82, via a C2 insertion during the post-formation annealing stages. We propose a systematic theoretical method for predicting metastable EMFs during the post-formation stages. The unambiguous molecular-level structural evidence, combined with the theoretical calculation results, provides valuable insights into the formation mechanisms of EMFs, shedding light on the potential of post-formation mechanisms as a promising approach for EMF synthesis.
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Affiliation(s)
- Yang-Rong Yao
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Department of Materials Science and Engineering, CAS Key Laboratory of Materials for Energy Conversion, Anhui Laboratory of Advanced Photon Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Zuo-Chang Chen
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Lingfang Chen
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Shan-Yu Zheng
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Shangfeng Yang
- Department of Materials Science and Engineering, CAS Key Laboratory of Materials for Energy Conversion, Anhui Laboratory of Advanced Photon Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Shun-Liu Deng
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Luis Echegoyen
- Institut Catalá d́Investigació Química, Ave. Països Catalans 16, Tarragona 43007, Spain
| | - Yuan-Zhi Tan
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Su-Yuan Xie
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Lan-Sun Zheng
- State Key Lab for Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
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Moreno-Vicente A, Roselló Y, Chen N, Echegoyen L, Dunk PW, Rodríguez-Fortea A, de Graaf C, Poblet JM. Are U-U Bonds Inside Fullerenes Really Unwilling Bonds? J Am Chem Soc 2023; 145:6710-6718. [PMID: 36872864 PMCID: PMC10064334 DOI: 10.1021/jacs.2c12346] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
Abstract
Previous characterizations of diactinide endohedral metallofullerenes (EMFs) Th2@C80 and U2@C80 have shown that although the two Th3+ ions form a strong covalent bond within the carbon cage, the interaction between the U3+ ions is weaker and described as an "unwilling" bond. To evaluate the feasibility of covalent U-U bonds, which are neglected in classical actinide chemistry, we have first investigated the formation of smaller diuranium EMFs by laser ablation using mass spectrometric detection of dimetallic U2@C2n species with 2n ≥ 50. DFT, CASPT2 calculations, and MD simulations for several fullerenes of different sizes and symmetries showed that thanks to the formation of strong U(5f3)-U(5f3) triple bonds, two U3+ ions can be incarcerated inside the fullerene. The formation of U-U bonds competes with U-cage interactions that tend to separate the U ions, hindering the observation of short U-U distances in the crystalline structures of diuranium endofullerenes as in U2@C80. Smaller cages like C60 exhibit the two interactions, and a strong triple U-U bond with an effective bond order higher than 2 is observed. Although 5f-5f interactions are responsible for the covalent interactions at distances close to 2.5 Å, overlap between 7s6d orbitals is still detected above 4 Å. In general, metal ions within fullerenes should be regarded as templates in cage formation, not as statistically confined units that have little chance of being observed.
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Affiliation(s)
- Antonio Moreno-Vicente
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, Marcel·lí Domingo 1, Tarragona 43007, Spain
| | - Yannick Roselló
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, Marcel·lí Domingo 1, Tarragona 43007, Spain
| | - Ning Chen
- Laboratory of Advanced Optoelectronic Materials, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, Jiangsu 215123, P. R. China
| | - Luis Echegoyen
- Department of Chemistry, University of Texas at El Paso, 500 West University Avenue, El Paso, Texas 79968, United States
| | - Paul W Dunk
- Ion Cyclotron Resonance Program, National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Antonio Rodríguez-Fortea
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, Marcel·lí Domingo 1, Tarragona 43007, Spain
| | - Coen de Graaf
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, Marcel·lí Domingo 1, Tarragona 43007, Spain.,ICREA, Pg. Lluis Companys 23, Barcelona 08010, Spain
| | - Josep M Poblet
- Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, Marcel·lí Domingo 1, Tarragona 43007, Spain
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Abstract
The embedment of a Cn-unit into a carbon network constituting fullerene(s) potentially enables a cage-expansion. Herein, we report a C2-insertion into a fullerene orifice in which the mechanism was examined computationally. The C2-embedded open-[60]fullerene possesses an orifice enlarged from an octagon to a decagon, while the inner space was notably expanded as confirmed by the dynamic motion of the incarcerated H2O molecule.
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Affiliation(s)
- Yoshifumi Hashikawa
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Yasujiro Murata
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
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Self-driven carbon atom implantation into fullerene embedding metal-carbon cluster. Proc Natl Acad Sci U S A 2022; 119:e2202563119. [PMID: 36122234 PMCID: PMC9522327 DOI: 10.1073/pnas.2202563119] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Hundreds of members have been synthesized and versatile applications have been promised for endofullerenes (EFs) in the past 30 y. However, the formation mechanism of EFs is still a long-standing puzzle to chemists, especially the mechanism of embedding clusters into charged carbon cages. Here, based on synthesis and structures of two representative vanadium-scandium-carbido/carbide EFs, VSc2C@Ih (7)-C80 and VSc2C2@Ih (7)-C80, a reasonable mechanism-C1 implantation (a carbon atom is implanted into carbon cage)-is proposed to interpret the evolution from VSc2C carbido to VSc2C2 carbide cluster. Supported by theoretical calculations together with crystallographic characterization, the single electron on vanadium (V) in VSc2C@Ih (7)-C80 is proved to facilitate the C1 implantation. While the V=C double bond is identified for VSc2C@Ih (7)-C80, after C1 implantation the distance between V and C atoms in VSc2C2@Ih (7)-C80 falls into the range of single bond lengths as previously shown in typical V-based organometallic complexes. This work exemplifies in situ self-driven implantation of an outer carbon atom into a charged carbon cage, which is different from previous heterogeneous implantation of nonmetal atoms (Group-V or -VIII atoms) driven by high-energy ion bombardment or high-pressure offline, and the proposed C1 implantation mechanism represents a heretofore unknown metal-carbon cluster encapsulation mechanism and can be the fundamental basis for EF family genesis.
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Ramazani A, Moghaddasi MA, Mashhadi Malekzadeh A, Rezayati S, Hanifehpour Y, Joo SW. Industrial oriented approach on fullerene preparation methods. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.108442] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Abstract
Full-carbon electronics at the scale of several angstroms is an expeimental challenge, which could be overcome by exploiting the versatility of carbon allotropes. Here, we investigate charge transport through graphene/single-fullerene/graphene hybrid junctions using a single-molecule manipulation technique. Such sub-nanoscale electronic junctions can be tuned by band gap engineering as exemplified by various pristine fullerenes such as C60, C70, C76 and C90. In addition, we demonstrate further control of charge transport by breaking the conjugation of their π systems which lowers their conductance, and via heteroatom doping of fullerene, which introduces transport resonances and increase their conductance. Supported by our combined density functional theory (DFT) calculations, a promising future of tunable full-carbon electronics based on numerous sub-nanoscale fullerenes in the large family of carbon allotropes is anticipated. All-carbon electronics holds promise beyond the conventional silicon-based electronics, but it remains challenging to manufacture them with well-defined structures thus tunability. Tan et al. control charge transport in single-molecule junctions using different fullerenes between graphene electrodes.
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Gómez‐Torres A, Esper R, Dunk PW, Morales‐Martínez R, Rodríguez‐Fortea A, Echegoyen L, Poblet JM. Small Cage Uranofullerenes: 27 Years after Their First Observation. Helv Chim Acta 2019. [DOI: 10.1002/hlca.201900046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Alejandra Gómez‐Torres
- Department of Chemistry University of Texas at El Paso 500 West University Avenue El Paso TX 79968 USA
| | - Ronda Esper
- Department of Chemistry University of Texas at El Paso 500 West University Avenue El Paso TX 79968 USA
| | - Paul W. Dunk
- Florida State UniversityNational High Magnetic Field Laboratory 1800 East Paul Dirac Drive Tallahassee FL 32310 USA
| | - Roser Morales‐Martínez
- Departament de Química Física i InorgànicaUniversitat Rovira i Virgili, C/Marcel⋅lí Domingo 1 ES-43007 Tarragona, Catalonia Spain
| | - Antonio Rodríguez‐Fortea
- Departament de Química Física i InorgànicaUniversitat Rovira i Virgili, C/Marcel⋅lí Domingo 1 ES-43007 Tarragona, Catalonia Spain
| | - Luis Echegoyen
- Department of Chemistry University of Texas at El Paso 500 West University Avenue El Paso TX 79968 USA
| | - Josep M. Poblet
- Departament de Química Física i InorgànicaUniversitat Rovira i Virgili, C/Marcel⋅lí Domingo 1 ES-43007 Tarragona, Catalonia Spain
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De Santiago HA, Gupta SK, Mao Y. On high purity fullerenol obtained by combined dialysis and freeze-drying method with its morphostructural transition and photoluminescence. Sep Purif Technol 2019. [DOI: 10.1016/j.seppur.2018.08.033] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Abstract
Concrete crystallographic results of endohedral metallofullerenes (EMFs) disclose that the bonding within the metallic clusters and the interactions between the metal ions and the cage carbon atoms, which are closely associated with the coordination ability of the metal ions, play essential roles in determining the stability, the molecular structure, and the chemical behavior of the hybrid EMF molecules, in addition to the previously recognized charge transfer from metal to cage. For the carbide cluster metallofullerenes, a "size effect" between the encapsulated metallic cluster and the fullerene cage has been suggested. Thus, through the geometric effect, a series of giant fullerenes (C90-C104) have been stabilized by encapsulating a large La2C2 cluster, which adopts different configurations in accordance with cage size and shape. Interestingly, the crystallographic analysis of La2C2@ D5(450)-C100 has led to the direct observation of the axial compression of short carbon nanotubes caused by the internal stress. Additionally, the defective C2(816)-C104 cage is viewed to be a precursor that can transform into the other three ideal tubular fullerene cages, presenting crystallographic evidence for the top-down formation mechanism of fullerenes. Structural characterization of Y2C2@C108 confirms a linear carbide cluster inside the large cage, indicative of a geometric effect of cage size on the bonding behavior of the internal cluster. Apart from the carbide realm, direct metal-metal bonding is observed between the two seemingly repulsive Lu2+ ions in Lu2@C82-86, adding new insights into current coordination chemistry. Meanwhile, the bonding state between the metal ions inside the cage (e.g., in La2@ I h(7)-C80) and even the configuration of the internal metallic cluster (e.g., in Sc3C2@ I h(7)-C80) can be readily controlled by exohedral radical addition, illuminating their future applications as single molecule magnets and in electronics. In addition, observation of the unexpected dimerization between two paramagnetic Y@ Cs(6)-C82 molecules suggests a spin-induced bonding behavior, which depends closely on the cage geometry. In contrast, synergistic effect of both electronic and geometric parameters has led to the formation of the unprecedented [6,6,6]-Lewis acid-base adduct of Sc3N@ I h(7)-C80. However, introduction of an oxygen atom gives rise to the corresponding normal carbene adducts for both Sc3N@ I h(7)-C80 and Lu3N@ I h(7)-C80, presenting an unexpected way of steric hindrance release. Remarkably, the Lewis acid-base complexation is demonstrated to be a facile way toward isomerically pure metallofullerene derivatives with surprisingly high regioselectivity and quantitative conversion yield for Sc2C2@ C3 v(8)-C82. This Account aims to give an advanced summary of the recent achievements in research of EMFs, focusing mainly on the interplay between the internal metallic species and the surrounding cages through bond formation or cleavage. Perspectives suggesting the future developments of EMFs are also given in the last section.
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Affiliation(s)
- Lipiao Bao
- State Key Laboratory of Material Processing and Die & Mould Technology, School of Materials Science and Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, P. R. China
| | - Ping Peng
- State Key Laboratory of Material Processing and Die & Mould Technology, School of Materials Science and Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, P. R. China
| | - Xing Lu
- State Key Laboratory of Material Processing and Die & Mould Technology, School of Materials Science and Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, P. R. China
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