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For: Ito T, Yang GR, Laurent P, Schultz DH, Cole MW. Constructing neural network models from brain data reveals representational transformations linked to adaptive behavior. Nat Commun 2022;13:673. [PMID: 35115530 PMCID: PMC8814166 DOI: 10.1038/s41467-022-28323-7] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 01/17/2022] [Indexed: 11/09/2022]  Open
Number Cited by Other Article(s)
1
Liu Z, Xia H, Chen A. Impaired brain ability of older adults to transit and persist to latent states with well-organized structures at wakeful rest. GeroScience 2025;47:1761-1776. [PMID: 39361232 PMCID: PMC11979083 DOI: 10.1007/s11357-024-01366-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Accepted: 09/24/2024] [Indexed: 11/16/2024]  Open
2
Mill RD, Cole MW. Dynamically shifting from compositional to conjunctive brain representations supports cognitive task learning. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2023.06.27.546751. [PMID: 37425922 PMCID: PMC10327096 DOI: 10.1101/2023.06.27.546751] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
3
Wang Z, Yang Y, Huang Z, Zhao W, Su K, Zhu H, Yin D. Exploring the transmission of cognitive task information through optimal brain pathways. PLoS Comput Biol 2025;21:e1012870. [PMID: 40053566 PMCID: PMC11957563 DOI: 10.1371/journal.pcbi.1012870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2024] [Revised: 03/18/2025] [Accepted: 02/12/2025] [Indexed: 03/09/2025]  Open
4
Kikumoto A, Bhandari A, Shibata K, Badre D. A transient high-dimensional geometry affords stable conjunctive subspaces for efficient action selection. Nat Commun 2024;15:8513. [PMID: 39353961 PMCID: PMC11445473 DOI: 10.1038/s41467-024-52777-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 09/18/2024] [Indexed: 10/03/2024]  Open
5
Zheng WL, Wu Z, Hummos A, Yang GR, Halassa MM. Rapid context inference in a thalamocortical model using recurrent neural networks. Nat Commun 2024;15:8275. [PMID: 39333467 PMCID: PMC11436643 DOI: 10.1038/s41467-024-52289-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Accepted: 08/29/2024] [Indexed: 09/29/2024]  Open
6
Kikumoto A, Shibata K, Nishio T, Badre D. Practice Reshapes the Geometry and Dynamics of Task-tailored Representations. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.09.12.612718. [PMID: 39314386 PMCID: PMC11419051 DOI: 10.1101/2024.09.12.612718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 09/25/2024]
7
Miller JA, Constantinidis C. Timescales of learning in prefrontal cortex. Nat Rev Neurosci 2024;25:597-610. [PMID: 38937654 DOI: 10.1038/s41583-024-00836-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/03/2024] [Indexed: 06/29/2024]
8
Kikumoto A, Bhandari A, Shibata K, Badre D. A Transient High-dimensional Geometry Affords Stable Conjunctive Subspaces for Efficient Action Selection. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.06.09.544428. [PMID: 37333209 PMCID: PMC10274903 DOI: 10.1101/2023.06.09.544428] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
9
Liu Y, Wang XJ. Flexible gating between subspaces in a neural network model of internally guided task switching. Nat Commun 2024;15:6497. [PMID: 39090084 PMCID: PMC11294624 DOI: 10.1038/s41467-024-50501-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Accepted: 07/10/2024] [Indexed: 08/04/2024]  Open
10
Gu S, Mattar MG, Tang H, Pan G. Emergence and reconfiguration of modular structure for artificial neural networks during continual familiarity detection. SCIENCE ADVANCES 2024;10:eadm8430. [PMID: 39058783 PMCID: PMC11277393 DOI: 10.1126/sciadv.adm8430] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 06/21/2024] [Indexed: 07/28/2024]
11
Liu Y, Wang XJ. Flexible gating between subspaces in a neural network model of internally guided task switching. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.08.15.553375. [PMID: 37645801 PMCID: PMC10462002 DOI: 10.1101/2023.08.15.553375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/31/2023]
12
Bernstein-Eliav M, Tavor I. The Prediction of Brain Activity from Connectivity: Advances and Applications. Neuroscientist 2024;30:367-377. [PMID: 36250457 PMCID: PMC11107130 DOI: 10.1177/10738584221130974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
13
Riveland R, Pouget A. Natural language instructions induce compositional generalization in networks of neurons. Nat Neurosci 2024;27:988-999. [PMID: 38499855 PMCID: PMC11537972 DOI: 10.1038/s41593-024-01607-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 02/15/2024] [Indexed: 03/20/2024]
14
Badrulhisham F, Pogatzki-Zahn E, Segelcke D, Spisak T, Vollert J. Machine learning and artificial intelligence in neuroscience: A primer for researchers. Brain Behav Immun 2024;115:470-479. [PMID: 37972877 DOI: 10.1016/j.bbi.2023.11.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 10/16/2023] [Accepted: 11/08/2023] [Indexed: 11/19/2023]  Open
15
Bijsterbosch JD, Farahibozorg SR, Glasser MF, Van Essen D, Snyder LH, Woolrich MW, Smith SM. Evaluating functional brain organization in individuals and identifying contributions to network overlap. IMAGING NEUROSCIENCE (CAMBRIDGE, MASS.) 2023;1:10.1162/imag_a_00046. [PMID: 40017584 PMCID: PMC11867625 DOI: 10.1162/imag_a_00046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 03/01/2025]
16
Finn ES, Poldrack RA, Shine JM. Functional neuroimaging as a catalyst for integrated neuroscience. Nature 2023;623:263-273. [PMID: 37938706 DOI: 10.1038/s41586-023-06670-9] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Accepted: 09/22/2023] [Indexed: 11/09/2023]
17
Bijsterbosch JD, Farahibozorg SR, Glasser MF, Essen DV, Snyder LH, Woolrich MW, Smith SM. Evaluating functional brain organization in individuals and identifying contributions to network overlap. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.09.21.558809. [PMID: 37790508 PMCID: PMC10542549 DOI: 10.1101/2023.09.21.558809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
18
Sanchez-Romero R, Ito T, Mill RD, Hanson SJ, Cole MW. Causally informed activity flow models provide mechanistic insight into network-generated cognitive activations. Neuroimage 2023;278:120300. [PMID: 37524170 PMCID: PMC10634378 DOI: 10.1016/j.neuroimage.2023.120300] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 07/06/2023] [Accepted: 07/28/2023] [Indexed: 08/02/2023]  Open
19
Brynildsen JK, Rajan K, Henderson MX, Bassett DS. Network models to enhance the translational impact of cross-species studies. Nat Rev Neurosci 2023;24:575-588. [PMID: 37524935 PMCID: PMC10634203 DOI: 10.1038/s41583-023-00720-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/17/2023] [Indexed: 08/02/2023]
20
van den Brink RL, Hagena K, Wilming N, Murphy PR, Büchel C, Donner TH. Flexible sensory-motor mapping rules manifest in correlated variability of stimulus and action codes across the brain. Neuron 2023;111:571-584.e9. [PMID: 36476977 DOI: 10.1016/j.neuron.2022.11.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 10/27/2022] [Accepted: 11/11/2022] [Indexed: 12/12/2022]
21
Castro MN, Bocaccio H, De Pino G, Sánchez SM, Wainsztein AE, Drucaroff L, Costanzo EY, Crossley NA, Villarreal MF, Guinjoan SM. Abnormal brain network community structure related to psychological stress in schizophrenia. Schizophr Res 2023;254:42-53. [PMID: 36801513 DOI: 10.1016/j.schres.2023.02.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/30/2020] [Revised: 01/30/2023] [Accepted: 02/04/2023] [Indexed: 02/17/2023]
22
Palenciano AF, Senoussi M, Formica S, González-García C. Canonical template tracking: Measuring the activation state of specific neural representations. FRONTIERS IN NEUROIMAGING 2023;1:974927. [PMID: 37555182 PMCID: PMC10406196 DOI: 10.3389/fnimg.2022.974927] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Accepted: 12/13/2022] [Indexed: 08/10/2023]
23
Hwang K, Shine JM, Cole MW, Sorenson E. Thalamocortical contributions to cognitive task activity. eLife 2022;11:e81282. [PMID: 36537658 PMCID: PMC9799971 DOI: 10.7554/elife.81282] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022]  Open
24
Li J, Zaikin A, Zhang X, Chen S. Editorial: Closed-loop iterations between neuroscience and artificial intelligence. Front Syst Neurosci 2022;16:1002095. [PMID: 36601288 PMCID: PMC9806858 DOI: 10.3389/fnsys.2022.1002095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Accepted: 11/29/2022] [Indexed: 12/24/2022]  Open
25
What is episodic memory and how do we use it? Trends Cogn Sci 2022;26:1059-1061. [PMID: 36335016 DOI: 10.1016/j.tics.2022.09.023] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Accepted: 09/29/2022] [Indexed: 11/06/2022]
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