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For: Zhang Z, Zhao X, Bindra M, Qiu P, Zhang X. scDisInFact: disentangled learning for integration and prediction of multi-batch multi-condition single-cell RNA-sequencing data. Nat Commun 2024;15:912. [PMID: 38291052 PMCID: PMC10827746 DOI: 10.1038/s41467-024-45227-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 01/18/2024] [Indexed: 02/01/2024]  Open
Number Cited by Other Article(s)
1
Zhang Z, Zhang X. Data-driven batch detection enhances single-cell omics data analysis. Cell Syst 2024;15:893-894. [PMID: 39419000 DOI: 10.1016/j.cels.2024.09.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2024] [Revised: 09/23/2024] [Accepted: 09/23/2024] [Indexed: 10/19/2024]
2
Luo P, Ye ZW, Yuan S. Bridging gaps: a neural network approach for cross-species scRNA-seq analysis in COVID-19. EBioMedicine 2024;108:105324. [PMID: 39236555 PMCID: PMC11404195 DOI: 10.1016/j.ebiom.2024.105324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2024] [Accepted: 08/21/2024] [Indexed: 09/07/2024]  Open
3
Johnston KG, Grieco SF, Nie Q, Theis FJ, Xu X. Small data methods in omics: the power of one. Nat Methods 2024;21:1597-1602. [PMID: 39174710 PMCID: PMC12067744 DOI: 10.1038/s41592-024-02390-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Accepted: 07/24/2024] [Indexed: 08/24/2024]
4
Liu R, Qian K, He X, Li H. Integration of scRNA-seq data by disentangled representation learning with condition domain adaptation. BMC Bioinformatics 2024;25:116. [PMID: 38493095 PMCID: PMC10944609 DOI: 10.1186/s12859-024-05706-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 02/15/2024] [Indexed: 03/18/2024]  Open
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