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For: Yu T, Liu Q, Wang X, Liu X, Chen Y, Nielsen J. Metabolic reconfiguration enables synthetic reductive metabolism in yeast. Nat Metab 2022;4:1551-1559. [PMID: 36302903 PMCID: PMC9684072 DOI: 10.1038/s42255-022-00654-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 09/06/2022] [Indexed: 02/08/2023]
Number Cited by Other Article(s)
1
Xiao Z, Zhao Y, Wang Y, Tan X, Wang L, Mao J, Zhang S, Lu Q, Hu F, Zuo S, Liu J, Shan Y. Sucrose-driven carbon redox rebalancing eliminates the Crabtree effect and boosts energy metabolism in yeast. Nat Commun 2025;16:5211. [PMID: 40473667 PMCID: PMC12141580 DOI: 10.1038/s41467-025-60578-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2024] [Accepted: 05/28/2025] [Indexed: 06/11/2025]  Open
2
Xiong B, Yang T, Zhang Z, Li X, Yu H, Wang L, You Z, Peng W, Jin L, Song H. Metabolic reprogramming and machine learning-guided cofactor engineering to boost nicotinamide mononucleotide production in Escherichia coli. BIORESOURCE TECHNOLOGY 2025;426:132350. [PMID: 40054751 DOI: 10.1016/j.biortech.2025.132350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2025] [Revised: 03/04/2025] [Accepted: 03/04/2025] [Indexed: 03/14/2025]
3
Guo B, Yu W, Xu X, Liu Y, Liu Y, Du G, Liu L, Lv X. Adaptively Evolved and Multiplexed Engineered Saccharomyces cerevisiae for Neutralizer-Free Production of l-Lactic Acid. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2025;73:9009-9018. [PMID: 40191959 DOI: 10.1021/acs.jafc.4c12575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/17/2025]
4
Sweetlove LJ, Ratcliffe RG, Fernie AR. Non-canonical plant metabolism. NATURE PLANTS 2025;11:696-708. [PMID: 40164785 DOI: 10.1038/s41477-025-01965-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Accepted: 03/01/2025] [Indexed: 04/02/2025]
5
Chen N, Shen R, He T, Xi J, Zhao R, Du N, Yang Y, Yu L, Yuan Q. A photosynthesis-derived bionic system for sustainable biosynthesis. Angew Chem Int Ed Engl 2025;64:e202414981. [PMID: 39805801 DOI: 10.1002/anie.202414981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Revised: 12/03/2024] [Accepted: 01/13/2025] [Indexed: 01/16/2025]
6
Guo Y, Xiong Z, Zhai H, Wang Y, Qi Q, Hou J. The advances in creating Crabtree-negative Saccharomyces cerevisiae and the application for chemicals biosynthesis. FEMS Yeast Res 2025;25:foaf014. [PMID: 40121184 PMCID: PMC11974387 DOI: 10.1093/femsyr/foaf014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2024] [Revised: 03/12/2025] [Accepted: 03/21/2025] [Indexed: 03/25/2025]  Open
7
Guo F, Liu K, Qiao Y, Zheng Y, Liu C, Wu Y, Zhang Z, Jiang W, Jiang Y, Xin F, Jiang M, Zhang W. Evolutionary engineering of Saccharomyces cerevisiae: Crafting a synthetic methylotroph via self-reprogramming. SCIENCE ADVANCES 2024;10:eadq3484. [PMID: 39705340 DOI: 10.1126/sciadv.adq3484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Accepted: 11/18/2024] [Indexed: 12/22/2024]
8
Li B, He J, Zuo K, Xu X, Zou X. Engineering the by-products pathway in Aureobasidium pullulans for highly purified polymalic acid fermentation with concurrent recovery of l-malic acid. BIORESOURCE TECHNOLOGY 2024;414:131578. [PMID: 39384045 DOI: 10.1016/j.biortech.2024.131578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2024] [Revised: 10/05/2024] [Accepted: 10/05/2024] [Indexed: 10/11/2024]
9
Hao H, Yao M, Wang Y, Zhang C, Liu Z, Nielsen J, Shi S, Xiao W, Yuan Y. Extending the G1 phase improves the production of lipophilic compounds in yeast by boosting enzyme expression and increasing cell size. Proc Natl Acad Sci U S A 2024;121:e2413486121. [PMID: 39536088 PMCID: PMC11588078 DOI: 10.1073/pnas.2413486121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2024] [Accepted: 10/12/2024] [Indexed: 11/16/2024]  Open
10
Li G, Liang H, Gao R, Qin L, Xu P, Huang M, Zong MH, Cao Y, Lou WY. Yeast metabolism adaptation for efficient terpenoids synthesis via isopentenol utilization. Nat Commun 2024;15:9844. [PMID: 39537637 PMCID: PMC11561230 DOI: 10.1038/s41467-024-54298-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Accepted: 11/06/2024] [Indexed: 11/16/2024]  Open
11
Chen Q, Chen Y, Hou Z, Ma Y, Huang J, Zhang Z, Chen Y, Yang X, Zhang Y, Zhao G. Unlocking the formate utilization of wild-type Yarrowia lipolytica through adaptive laboratory evolution. Biotechnol J 2024;19:e2400290. [PMID: 38900053 DOI: 10.1002/biot.202400290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 05/22/2024] [Accepted: 05/28/2024] [Indexed: 06/21/2024]
12
Pan X, Heacock ML, Abdulaziz EN, Violante S, Zuckerman AL, Shrestha N, Yao C, Goodman RP, Cross JR, Cracan V. A genetically encoded tool to increase cellular NADH/NAD+ ratio in living cells. Nat Chem Biol 2024;20:594-604. [PMID: 37884806 PMCID: PMC11045668 DOI: 10.1038/s41589-023-01460-w] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 09/25/2023] [Indexed: 10/28/2023]
13
Murphy AC, McReynolds MR. Toying with reductive stress. Nat Chem Biol 2024;20:542-543. [PMID: 37884808 DOI: 10.1038/s41589-023-01461-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2023]
14
Ma X, Sun C, Xian M, Guo J, Zhang R. Progress in research on the biosynthesis of 1,2,4-butanetriol by engineered microbes. World J Microbiol Biotechnol 2024;40:68. [PMID: 38200399 DOI: 10.1007/s11274-024-03885-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 01/05/2024] [Indexed: 01/12/2024]
15
Yang X, Zhang Y, Zhao G. Artificial carbon assimilation: From unnatural reactions and pathways to synthetic autotrophic systems. Biotechnol Adv 2024;70:108294. [PMID: 38013126 DOI: 10.1016/j.biotechadv.2023.108294] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 10/26/2023] [Accepted: 11/18/2023] [Indexed: 11/29/2023]
16
Wang L, Luo H, Yao B, Yao J, Zhang J. Optimizing Hexose Utilization Pathways of Cupriavidus necator for Improving Growth and L-Alanine Production under Heterotrophic and Autotrophic Conditions. Int J Mol Sci 2023;25:548. [PMID: 38203719 PMCID: PMC10778655 DOI: 10.3390/ijms25010548] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 12/28/2023] [Accepted: 12/29/2023] [Indexed: 01/12/2024]  Open
17
Vásquez Castro E, Memari G, Ata Ö, Mattanovich D. Carbon efficient production of chemicals with yeasts. Yeast 2023;40:583-593. [PMID: 37997485 PMCID: PMC10946752 DOI: 10.1002/yea.3909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 10/16/2023] [Accepted: 10/29/2023] [Indexed: 11/25/2023]  Open
18
Kulakowski S, Banerjee D, Scown CD, Mukhopadhyay A. Improving microbial bioproduction under low-oxygen conditions. Curr Opin Biotechnol 2023;84:103016. [PMID: 37924688 DOI: 10.1016/j.copbio.2023.103016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/17/2023] [Accepted: 10/07/2023] [Indexed: 11/06/2023]
19
Yan Q, Han L, Liu Z, Zhou S, Zhou Z. Stepwise genetic modification for efficient expression of heterologous proteins in Aspergillus nidulans. Appl Microbiol Biotechnol 2023;107:6923-6935. [PMID: 37698610 DOI: 10.1007/s00253-023-12755-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Revised: 08/09/2023] [Accepted: 08/26/2023] [Indexed: 09/13/2023]
20
Qiao S, Bai F, Cai P, Zhou YJ, Yao L. An improved CRISPRi system in Pichia pastoris. Synth Syst Biotechnol 2023;8:479-485. [PMID: 37692202 PMCID: PMC10485788 DOI: 10.1016/j.synbio.2023.06.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 06/09/2023] [Accepted: 06/25/2023] [Indexed: 09/12/2023]  Open
21
Ma W, Li X, Zhang F, Zhang ZY, Yang WQ, Huang PW, Gu Y, Sun XM. Enhancing the biomass and docosahexaenoic acid-rich lipid accumulation of Schizochytrium sp. in propionate wastewater. Biotechnol J 2023;18:e2300052. [PMID: 37128672 DOI: 10.1002/biot.202300052] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 04/15/2023] [Accepted: 04/26/2023] [Indexed: 05/03/2023]
22
Guo F, Qiao Y, Xin F, Zhang W, Jiang M. Bioconversion of C1 feedstocks for chemical production using Pichia pastoris. Trends Biotechnol 2023;41:1066-1079. [PMID: 36967258 DOI: 10.1016/j.tibtech.2023.03.006] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 02/14/2023] [Accepted: 03/06/2023] [Indexed: 04/03/2023]
23
Cool L, Hanon S, Verstrepen KJ. Metabolism: How a eukaryote adapted to life without respiration. Curr Biol 2023;33:R444-R447. [PMID: 37279666 DOI: 10.1016/j.cub.2023.05.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
24
Shang Y, Zhang P, Wei W, Li J, Ye BC. Metabolic engineering for the high-yield production of polydatin in Yarrowia lipolytica. BIORESOURCE TECHNOLOGY 2023;381:129129. [PMID: 37146696 DOI: 10.1016/j.biortech.2023.129129] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Revised: 04/27/2023] [Accepted: 05/01/2023] [Indexed: 05/07/2023]
25
Kim GB, Choi SY, Cho IJ, Ahn DH, Lee SY. Metabolic engineering for sustainability and health. Trends Biotechnol 2023;41:425-451. [PMID: 36635195 DOI: 10.1016/j.tibtech.2022.12.014] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 12/17/2022] [Accepted: 12/21/2022] [Indexed: 01/12/2023]
26
Lindner SN, Ralser M. Synthetic metabolism without the TCA cycle. Nat Metab 2022;4:1438-1439. [PMID: 36302905 DOI: 10.1038/s42255-022-00668-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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