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Yao L, Shippy T, Li Y. Genetic analysis of the molecular regulation of electric fields-guided glia migration. Sci Rep 2020; 10:16821. [PMID: 33033380 PMCID: PMC7546725 DOI: 10.1038/s41598-020-74085-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Accepted: 08/31/2020] [Indexed: 11/09/2022] Open
Abstract
In a developing nervous system, endogenous electric field (EF) influence embryonic growth. We reported the EF-directed migration of both rat Schwann cells (SCs) and oligodendrocyte precursor cells (OPCs) and explored the molecular mechanism using RNA-sequencing assay. However, previous studies revealed the differentially expressed genes (DEGs) associated with EF-guided migration of SCs or OPCs alone. In this study, we performed joint differential expression analysis on the RNA-sequencing data from both cell types. We report a number of significantly enriched gene ontology (GO) terms that are related to the cytoskeleton, cell adhesion, and cell migration. Of the DEGs associated with these terms, nine up-regulated DEGs and 32 down-regulated DEGs showed the same direction of effect in both SCs and OPCs stimulated with EFs, while the remaining DEGs responded differently. Thus, our study reveals the similarities and differences in gene expression and cell migration regulation of different glial cell types in response to EF stimulation.
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Affiliation(s)
- Li Yao
- Department of Biological Sciences, Wichita State University, 1845 Fairmount Street, Wichita, KS, 67260, USA.
| | - Teresa Shippy
- Bioinformatics Specialist, KSU Bioinformatics Center, Kansas State University, Manhattan, KS, 66506, USA
| | - Yongchao Li
- Department of Biological Sciences, Wichita State University, 1845 Fairmount Street, Wichita, KS, 67260, USA
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Coordinated cell motility is regulated by a combination of LKB1 farnesylation and kinase activity. Sci Rep 2017; 7:40929. [PMID: 28102310 PMCID: PMC5244416 DOI: 10.1038/srep40929] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Accepted: 12/14/2016] [Indexed: 01/07/2023] Open
Abstract
Cell motility requires the precise coordination of cell polarization, lamellipodia formation, adhesion, and force generation. LKB1 is a multi-functional serine/threonine kinase that associates with actin at the cellular leading edge of motile cells and suppresses FAK. We sought to understand how LKB1 coordinates these multiple events by systematically dissecting LKB1 protein domain function in combination with live cell imaging and computational approaches. We show that LKB1-actin colocalization is dependent upon LKB1 farnesylation leading to RhoA-ROCK-mediated stress fiber formation, but membrane dynamics is reliant on LKB1 kinase activity. We propose that LKB1 kinase activity controls membrane dynamics through FAK since loss of LKB1 kinase activity results in morphologically defective nascent adhesion sites. In contrast, defective farnesylation mislocalizes nascent adhesion sites, suggesting that LKB1 farnesylation serves as a targeting mechanism for properly localizing adhesion sites during cell motility. Together, we propose a model where coordination of LKB1 farnesylation and kinase activity serve as a multi-step mechanism to coordinate cell motility during migration.
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Wu Y, Zhang K, Seong J, Fan J, Chien S, Wang Y, Lu S. In-situ coupling between kinase activities and protein dynamics within single focal adhesions. Sci Rep 2016; 6:29377. [PMID: 27383747 PMCID: PMC4935953 DOI: 10.1038/srep29377] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Accepted: 06/15/2016] [Indexed: 11/30/2022] Open
Abstract
The dynamic activation of oncogenic kinases and regulation of focal adhesions (FAs) are crucial molecular events modulating cell adhesion in cancer metastasis. However, it remains unclear how these events are temporally coordinated at single FA sites. Therefore, we targeted fluorescence resonance energy transfer (FRET)-based biosensors toward subcellular FAs to report local molecular events during cancer cell adhesion. Employing single FA tracking and cross-correlation analysis, we quantified the dynamic coupling characteristics between biochemical kinase activities and structural FA within single FAs. We show that kinase activations and FA assembly are strongly and sequentially correlated, with the concurrent FA assembly and Src activation leading focal adhesion kinase (FAK) activation by 42.6 ± 12.6 sec. Strikingly, the temporal coupling between kinase activation and individual FA assembly reflects the fate of FAs at later stages. The FAs with a tight coupling tend to grow and mature, while the less coupled FAs likely disassemble. During FA disassembly, however, kinase activations lead the disassembly, with FAK being activated earlier than Src. Therefore, by integrating subcellularly targeted FRET biosensors and computational analysis, our study reveals intricate interplays between Src and FAK in regulating the dynamic life of single FAs in cancer cells.
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Affiliation(s)
- Yiqian Wu
- Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA
| | - Kaiwen Zhang
- Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA
| | - Jihye Seong
- Center for Neuro-Medicine, Brain Science Institute, Korea Institute of Science and Technology (KIST), Seoul, South Korea
| | - Jason Fan
- Institute of Engineering in Medicine, University of California, San Diego, La Jolla, CA 92093, USA
| | - Shu Chien
- Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA.,Institute of Engineering in Medicine, University of California, San Diego, La Jolla, CA 92093, USA
| | - Yingxiao Wang
- Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA.,Institute of Engineering in Medicine, University of California, San Diego, La Jolla, CA 92093, USA
| | - Shaoying Lu
- Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA.,Institute of Engineering in Medicine, University of California, San Diego, La Jolla, CA 92093, USA.,Center of Computational Mathematics, University of California, San Diego, La Jolla, CA 92093, USA
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Du C, Gao Y, Xu S, Jia J, Huang Z, Fan J, Wang X, He D, Guo P. KLF5 promotes cell migration by up-regulating FYN in bladder cancer cells. FEBS Lett 2016; 590:408-18. [PMID: 26786295 DOI: 10.1002/1873-3468.12069] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2015] [Revised: 12/07/2015] [Accepted: 12/30/2015] [Indexed: 11/08/2022]
Affiliation(s)
- Chong Du
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
| | - Yang Gao
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
| | - Shan Xu
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
- Oncology Research Lab; Key Laboratory of Environment and Genes Related to Diseases; Ministry of Education; Xi'an Shaanxi China
| | - Jing Jia
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
| | - Zhixin Huang
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
| | - Jinhai Fan
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
- Oncology Research Lab; Key Laboratory of Environment and Genes Related to Diseases; Ministry of Education; Xi'an Shaanxi China
| | - Xinyang Wang
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
- Oncology Research Lab; Key Laboratory of Environment and Genes Related to Diseases; Ministry of Education; Xi'an Shaanxi China
| | - Dalin He
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
- Oncology Research Lab; Key Laboratory of Environment and Genes Related to Diseases; Ministry of Education; Xi'an Shaanxi China
| | - Peng Guo
- Department of Urology; The First Affiliated Hospital of Xi'an Jiaotong University; Shaanxi China
- Oncology Research Lab; Key Laboratory of Environment and Genes Related to Diseases; Ministry of Education; Xi'an Shaanxi China
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