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For: Miyazaki R, Yura T, Suzuki T, Dohmae N, Mori H, Akiyama Y. A Novel SRP Recognition Sequence in the Homeostatic Control Region of Heat Shock Transcription Factor σ32. Sci Rep 2016;6:24147. [PMID: 27052372 DOI: 10.1038/srep24147] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Accepted: 03/21/2016] [Indexed: 12/29/2022]  Open
Number Cited by Other Article(s)
1
Miwa T, Taguchi H. Revival of the Escherichia coli heat shock response after two decades with a small Hsp in a critical but distinct act. Biol Chem 2025;406:29-33. [PMID: 39760265 DOI: 10.1515/hsz-2024-0140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Accepted: 12/20/2024] [Indexed: 01/07/2025]
2
Wang XT, Ma BG. Spatial Chromosome Organization and Adaptation of Escherichia coli under Heat Stress. Microorganisms 2024;12:1229. [PMID: 38930611 PMCID: PMC11205535 DOI: 10.3390/microorganisms12061229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 06/14/2024] [Accepted: 06/14/2024] [Indexed: 06/28/2024]  Open
3
Miwa T, Taguchi H. Escherichia coli small heat shock protein IbpA plays a role in regulating the heat shock response by controlling the translation of σ32. Proc Natl Acad Sci U S A 2023;120:e2304841120. [PMID: 37523569 PMCID: PMC10410725 DOI: 10.1073/pnas.2304841120] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 06/23/2023] [Indexed: 08/02/2023]  Open
4
Gross CA, Erickson J, Grossman AD, Guisbert E, Lim B, Siegele D, Straus D. Takashi Yura: pioneer, visionary scientist, friend. Cell Stress Chaperones 2023;28:351-356. [PMID: 37341958 PMCID: PMC10352208 DOI: 10.1007/s12192-023-01352-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/22/2023]  Open
5
Bianchi D, Pelletier JF, Hutchison CA, Glass JI, Luthey-Schulten Z. Toward the Complete Functional Characterization of a Minimal Bacterial Proteome. J Phys Chem B 2022;126:6820-6834. [PMID: 36048731 PMCID: PMC9483919 DOI: 10.1021/acs.jpcb.2c04188] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/10/2022] [Indexed: 11/29/2022]
6
Oswald J, Njenga R, Natriashvili A, Sarmah P, Koch HG. The Dynamic SecYEG Translocon. Front Mol Biosci 2021;8:664241. [PMID: 33937339 PMCID: PMC8082313 DOI: 10.3389/fmolb.2021.664241] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 03/24/2021] [Indexed: 12/13/2022]  Open
7
Miyazaki R, Akiyama Y, Mori H. Fine interaction profiling of VemP and mechanisms responsible for its translocation-coupled arrest-cancelation. eLife 2020;9:62623. [PMID: 33320090 PMCID: PMC7793623 DOI: 10.7554/elife.62623] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 12/11/2020] [Indexed: 12/24/2022]  Open
8
Liu Y, Tan Z, Yang Y. Negative feedback and modern anti-cancer strategies targeting the ER stress response. FEBS Lett 2020;594:4247-4265. [PMID: 33206409 DOI: 10.1002/1873-3468.14000] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 09/18/2020] [Accepted: 10/25/2020] [Indexed: 12/13/2022]
9
Two Signal Recognition Particle Sequences Are Present in the Amino-Terminal Domain of the C-Tailed Protein SciP. J Bacteriol 2020;203:JB.00312-20. [PMID: 33020223 DOI: 10.1128/jb.00312-20] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 10/01/2020] [Indexed: 01/22/2023]  Open
10
Lon Protease Removes Excess Signal Recognition Particle Protein in Escherichia coli. J Bacteriol 2020;202:JB.00161-20. [PMID: 32366590 DOI: 10.1128/jb.00161-20] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Accepted: 04/15/2020] [Indexed: 12/12/2022]  Open
11
Argunhan B, Sakakura M, Afshar N, Kurihara M, Ito K, Maki T, Kanamaru S, Murayama Y, Tsubouchi H, Takahashi M, Takahashi H, Iwasaki H. Cooperative interactions facilitate stimulation of Rad51 by the Swi5-Sfr1 auxiliary factor complex. eLife 2020;9:52566. [PMID: 32204793 PMCID: PMC7093153 DOI: 10.7554/elife.52566] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Accepted: 02/13/2020] [Indexed: 01/26/2023]  Open
12
Miyazaki R, Akiyama Y, Mori H. A photo-cross-linking approach to monitor protein dynamics in living cells. Biochim Biophys Acta Gen Subj 2019;1864:129317. [PMID: 30851405 DOI: 10.1016/j.bbagen.2019.03.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Revised: 02/26/2019] [Accepted: 03/04/2019] [Indexed: 11/16/2022]
13
Yura T, Miyazaki R, Fujiwara K, Ito K, Chiba S, Mori H, Akiyama Y. Heat shock transcription factor σ<sup>32</sup> defective in membrane transport can be suppressed by transposon insertion into genes encoding a restriction enzyme subunit or a putative autotransporter in <i>Escherichia coli</i>. Genes Genet Syst 2018;93:229-235. [DOI: 10.1266/ggs.18-00040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
14
Potential Applications of the Escherichia coli Heat Shock Response in Synthetic Biology. Trends Biotechnol 2018;36:186-198. [DOI: 10.1016/j.tibtech.2017.10.014] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Revised: 10/20/2017] [Accepted: 10/20/2017] [Indexed: 01/06/2023]
15
Roncarati D, Scarlato V. Regulation of heat-shock genes in bacteria: from signal sensing to gene expression output. FEMS Microbiol Rev 2017;41:549-574. [PMID: 28402413 DOI: 10.1093/femsre/fux015] [Citation(s) in RCA: 121] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Accepted: 03/14/2017] [Indexed: 02/07/2023]  Open
16
Miyazaki R, Myougo N, Mori H, Akiyama Y. A photo-cross-linking approach to monitor folding and assembly of newly synthesized proteins in a living cell. J Biol Chem 2017;293:677-686. [PMID: 29158258 DOI: 10.1074/jbc.m117.817270] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Revised: 11/03/2017] [Indexed: 11/06/2022]  Open
17
Daimon Y, Iwama-Masui C, Tanaka Y, Shiota T, Suzuki T, Miyazaki R, Sakurada H, Lithgow T, Dohmae N, Mori H, Tsukazaki T, Narita SI, Akiyama Y. The TPR domain of BepA is required for productive interaction with substrate proteins and the β-barrel assembly machinery complex. Mol Microbiol 2017;106:760-776. [PMID: 28960545 DOI: 10.1111/mmi.13844] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/18/2017] [Indexed: 01/21/2023]
18
Plant E3 ligases ubiquitinate Escherichia coli σ32in vitro. Biochem Biophys Res Commun 2017;490:1232-1236. [PMID: 28676399 DOI: 10.1016/j.bbrc.2017.06.198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2017] [Accepted: 06/30/2017] [Indexed: 11/23/2022]
19
Bittner LM, Arends J, Narberhaus F. When, how and why? Regulated proteolysis by the essential FtsH protease in Escherichia coli. Biol Chem 2017;398:625-635. [PMID: 28085670 DOI: 10.1515/hsz-2016-0302] [Citation(s) in RCA: 75] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Accepted: 01/09/2017] [Indexed: 11/15/2022]
20
A novel plant E3 ligase stabilizes Escherichia coli heat shock factor σ32. Sci Rep 2017. [PMID: 28642478 PMCID: PMC5481349 DOI: 10.1038/s41598-017-03056-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]  Open
21
Akiyama K, Hizukuri Y, Akiyama Y. Involvement of a conserved GFG motif region in substrate binding by RseP, an E scherichia coli S2P protease. Mol Microbiol 2017;104:737-751. [DOI: 10.1111/mmi.13659] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/01/2017] [Indexed: 11/30/2022]
22
Kuhn A, Koch HG, Dalbey RE. Targeting and Insertion of Membrane Proteins. EcoSal Plus 2017;7. [PMID: 28276312 PMCID: PMC11575690 DOI: 10.1128/ecosalplus.esp-0012-2016] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Indexed: 06/06/2023]
23
Schumann W. Regulation of the Heat Shock Response in Bacteria. PROKARYOTIC CHAPERONINS 2017. [DOI: 10.1007/978-981-10-4651-3_2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
24
Schumann W. Regulation of bacterial heat shock stimulons. Cell Stress Chaperones 2016;21:959-968. [PMID: 27518094 PMCID: PMC5083672 DOI: 10.1007/s12192-016-0727-z] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2016] [Revised: 07/20/2016] [Accepted: 07/21/2016] [Indexed: 11/28/2022]  Open
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