Analyte Detection: A Decade of Progress in the Development of Optical/Fluorescent Sensing Probes

The development of selective and sensitive chemical sensors capable of detecting metal ions, anions, neutral species, explosives and hazardous substances, selectively and sensitively has attracted considerable interest of various research groups. The presence of such analytes within the permissible limits is often beneficial, but the excess amounts may lead to lethal effects to both the environment as well as the living organisms. Owing to the toxicity of the heavy metal ions, toxic anions and nitro-aromatics which are main constituents of explosives, the timely detection of these materials is most desirable to ensure safety and security of the mankind. In this personal account, we present several classes of molecular sensors that were specifically designed in our lab during the past decade for detecting several species in solutions, solid state as well as biological media. Modulation of the optical properties in response to the presence of guest species, led to selective and sensitive detection protocols, and was supported by the theoretical studies wherever possible. We have also extended the application of some of these probes for the on-site detection of analytes by developing the paper strips, glass slides and even the wool and cotton fabrics loaded with probes. One such development represents detection of palladium in human urine and blood samples collected from clinical samples. Additionally, the sensing events in some cases have successfully been reproduced in the live cancer cells. Based on the ease and cost-effective synthesis of the molecular probes, we hope that this account shall provide significant information to researchers in understanding the structure dependent sensing capabilities of the molecular probes.

Unsaturated Sulfur Crown Ethers Can Extract Mercury(II) and Show Promise for Future Copernicium(II) Studies: A Combined Experimental and Computational Study

The unsaturated hexathia-18-crown-6 (UHT18C6) molecule was investigated for the extraction of Hg(II) in HCl and HNO₃ media. This extractant can be directly compared to the recently studied saturated hexathia-18-crown-6 (HT18C6). The default conformation of the S lone pairs in UHT18C6 is endodentate, where the pocket of the charge density, according to the crystal structures, is oriented toward the center of the ring, which should allow better extraction for Hg(II) compared to the exodentate HT18C6. Batch study experiments showed that Hg(II) had better extraction at low acid molarity (ca. 99% in HCl and ca. 95% in HNO₃), while almost no extraction was observed above 0.4 M HCl and 4 M HNO₃ (<5%). Speciation studies were conducted with the goal of delineating a plausible extraction mechanism. Density functional theory calculations including relativistic effects were carried out on both Hg(II)-encapsulated HT18C6 and UHT18C6 complexes to shed light on the binding strength and the nature of bonding. Our calculations offer insights into the extraction mechanism. In addition to Hg(II), calculations were performed on the hypothetical divalent Cn(II) ion, and showed that HT18C6 and UHT18C6 could extract Cn(II). Finally, the extraction kinetics were explored to assess whether this crown can extract the short-lived Cn(II) species in a future online experiment.

Synthesis, characterisation and ion-binding properties of oxathiacrown ethers appended to [Ru(bpy)2]2+. Selectivity towards Hg2+, Cd2+and Pb2+

Oxathiacrown ether modified ruthenium complex2facilitates a selective naked-eye detection of Hg²⁺with an instrumental detection limit of 68 ppm.

Coordination structure and extraction behavior of a silver ion with N-substituted-9-aza-3,6,12,15-tetrathiaheptadecanes: significant effect of Ph-C-N framework on the extractability

N-Substituted-9-aza-3,6,12,15-tetrathiaheptadecanes having Ph-C-N frameworks (N-R-ATH; R = benzyl (N-Bn-ATH), 4-nitrobenzyl (N-NO2Bn-ATH), and diphenylmethyl (N-Ph2CH-ATH)) were synthesized, and their Ag(i) complexes were structurally characterized. X-Ray crystal structure analyses of [Ag(N-R-ATH)](BF4) (R = Bn and Ph2CH) revealed monomeric tetra-S-coordinated complex cation structures without the N-coordination, and a benzene ring of the N-R group covered over the amine nitrogen atom. The precise extraction analyses of a Ag(i) ion with ATH derivatives (L = N-R-ATHs and N-H-ATH) associated with the (1)H NMR analyses of the [Ag(L)](+) complexes in polar and non-polar solvents revealed that the introduction of the N-substituent significantly enhanced the extractability of Ag(+), due to the "hydrophobic cover" effect by the Ph-C-N framework in the [Ag(N-R-ATH)](+) complexes.

Electrospray ionization mass spectrometric investigations of the complexation behavior of macrocyclic thiacrown ethers with bivalent transitional metals (Cu, Co, Ni and Zn)

RATIONALE

Heavy metals are both a problem for the environment and an important resource for industry. Their selective extraction by means of organic ligands therefore is an attractive topic. The coordination of three thiacrown ethers to late 3d-metal ions was investigated by a combination of electrospray ionization mass spectrometry (ESI-MS) and electron paramagnetic resonance (EPR).

METHODS

The mass spectrometric experiments were carried out in an ion trap mass spectrometer with an ESI source. Absolute binding constants were estimated by comparison with data for 18-crown-6/Na(+). EPR spectroscopy was used as a complementary method for investigating the Cu(I) /Cu(II) redox couple.

RESULTS

The study found that thiacrown ethers preferentially bind traces of copper even at an excess of other metal ions (Co(II), Ni(II), and Zn(II)). The absolute association constants of the Cu(I) complexes were about 10(8) M(-1), and about two orders of magnitude lower for the other 3d-metal cations. The EPR spectra demonstrated that the reduction from Cu(II) to Cu(I) upon formation of the [(thiacrown)Cu](+) species takes place in solution.

CONCLUSIONS

ESI-MS demonstrated that the three thiacrown ligands examined had high binding constants as well as good selectivities for copper(I) at low concentrations, and in the presence of other metal ions. By a combination of ESI-MS and EPR spectrometry it was shown that the reduction from Cu(II) to Cu(I) occurred in solution.

Thiamacrocyclic lactones: new Ag(I)-ionophores

The syntheses of novel adamantane thialactones 5-12 are reported, and the results of the heavy- and transition-metal cation extraction experiments are described. The results are compared with those obtained with similar thiamacrocyclic ligands that have flexible chains of methylene groups incorporated into the macrocyclic framework as in 13-20. The results show that most of the hosts studied are very good in complexing the Ag(+) ion. The formation of complexes has also been demonstrated using NMR titration experiments for macrocycles 13 and 14 with AgTFA. Introduction of a single polycyclic molecule into the 15- to 18-membered rings increases the rigidity and preorganizes the ligand for complexation. However, two adamantane molecules embedded in the ring usually diminish the complexing ability of the ligand, primarily due to sterical effects of the bulky adamantane moiety that obstructs formation of an optimal geometry for binding the desired metal ion. The structures of macrocycles 5, 7, 9, 11, and 19 were determined by X-ray structure analysis, and their conformational properties are discussed. In the solid state, 7, 11, and 19 are organized into tubular fashion using C-H...O interactions. Also, two silver complexes with thialactone 13, Ag13 and Ag(13)(2), were prepared and characterized. The structure analysis of Ag13 and Ag(13)(2) reveals the formation of mononuclear and binuclear species with silver in ambivalent, tetrahedral coordination via sulfur and oxygen from trifluoroacetate anion.

Cadmium-113 NMR studies on homoleptic complexes containing thioether ligands: the crystal structures of [Cd([12]aneS4)2](ClO4)2, [Cd([18]aneS4N2)](PF6)2 and [Cd([9]aneS3)2](PF6)2

We report the measurement of 113Cd NMR chemical shift data for homoleptic thioether and related aza and mixed aza/thiacrown complexes. In a series of Cd(II) complexes containing trithioether to hexathioether ligands, we observe solution 113Cd NMR chemical shifts in the range of 225 to 731 ppm. Upfield chemical shifts in these NMR spectra are seen whenever: (a) the number of thioether sulfur donors in the complex is decreased, (b) a thioether sulfur donor is replaced by a secondary nitrogen donor, or (c) the size of the macrocycle ring increases without a change in the nature or number of the donor atoms. Changes in the identity of non-coordinating anions such as perchlorate or hexafluorophosphate have little effect upon the 113Cd NMR chemical shift in solution. We report the X-ray structure of the complex [Cd([12]aneS4)2](ClO4)2 ([12]aneS4 = 1,4,7,10-tetrathiacyclododecane) (1) which shows the first example of octakis(thioether) coordination of a metal ion, forming an unusual eight-coordinate square antiprismatic structure. We report the X-ray structure of the complex [Cd([9]aneS3)2](PF6)2 ([9]aneS3 = 1,4,7-trithiacyclononane) (3a) which shows hexakis(thioether) coordination to form a distorted octahedral structure. We have also prepared and characterized the Cd(II) complex of a mixed azathiacrown, [Cd([18]aneS4N2)](PF6)2 ([18]aneS4N2 = 1,4,10,13-tetrathia-7,16-diazacyclooctadecane) (6). Its X-ray structure shows a distorted octahedral S4N2 environment around the Cd(II) with the ligand coordinated in the rac fashion. We observe a solvent- and temperature-dependent 14N-1H coupling in the 1H NMR spectrum of the complex which is not present in analogous complexes with this ligand.

Mercury-199 NMR Studies of Thiacrown and Related Macrocyclic Complexes: The Crystal Structures of [Hg(18S6)](PF6)2 and [Hg(9N3)2](ClO4)2

We wish to report the first measurements of (199)Hg NMR chemical shift data for a series of homoleptic Hg(II) complexes with thiacrown ligands and related aza and mixed thia/aza macrocycles. In mercury(II) complexes containing trithiacrown through hexathiacrown ligands, we observed (199)Hg NMR chemical shifts in the range of -298 to -1400 ppm. Upfield chemical shifts in these NMR spectra are seen whenever (a) the number of thioether sulfur donors in the complex is decreased, (b) a thioether sulfur donor is replaced by a secondary nitrogen donor, and (c) the size of the macrocycle ring increases without a change in the nature or number of the donor atoms. Changes in noncoordinating anions, such as hexafluorophosphate and perchlorate, have little effect on the (199)Hg chemical shift. For several complexes, we observed (3)J((199)Hg-(1)H) coupling in the range of 50-100 Hz, the first example of proton-mercury coupling through a C-S thioether bond. Also, we obtained unusual upfield (13)C NMR chemical shifts for methylene resonances in several of the thiacrown complexes which correspond to distortions within the five- and six-membered chelate rings bound to the mercury ion. We report the X-ray crystal structure of the complex [Hg(18S6)](PF(6))(2) (18S6 = 1,4,7,10,13,16-hexathiacyclooctadecane). The molecule crystallizes in the rare trigonal space group Pm1 with hexakis(thioether) coordination around the Hg(II) center confirming previous X-ray photoemission spectroscopic data on the compound. The lack of an observable (199)Hg NMR signal for the complex is the result of the identical length (2.689(2) Angstroms) of all six Hg-S bonds. We additionally report the X-ray structure of the complex [Hg(9N3)(2)](ClO(4))(2) (9N3 = 1,4,7-triazacyclononane) which shows hexakis(amine) coordination of the 9N3 to form a distorted trigonal prismatic structure. Solution dissociation of the one of the 9N3 ligands from the mercury ion is confirmed by multinuclear NMR experiments. For six-coordinate macrocyclic Hg(II) complexes, N6 donor sets have a preference for trigonal prisms while S6 donor sets favor octahedral structures.

Task-specific ionic liquids incorporating novel cations for the coordination and extraction of Hg2+ and Cd2+: synthesis, characterization, and extraction studies

A series of hydrophobic task-specific ionic liquids designed to extract Hg2+ and Cd2+ from water were prepared by appending urea-, thiourea-, and thioether-substituted alkyl groups to imidazoles and combining the resulting cationic species with PF6-. The new ionic liquids were characterized and investigated for their metal ion extraction capabilities. When used in liquid/liquid extraction of Hg2+ and Cd2+ from aqueous solutions, the metal ion distribution ratios increased several orders of magnitude, regardless of whether the ionic liquids were used as the sole extracting phase or doped into a series of [1-alkyl-3-methylimidazolium][PF6] (alkyl = n-C4-C8) ionic liquids to form a 1:1 solution. In the 1:1 mixtures, as the length of the alkyl chain increased from butyl to hexyl to octyl, the metal ion distribution ratios increased. Increasing the ratio TSIL/[C4mim][PF6] resulted in higher distribution ratios for both Hg2+ and Cd2+. Overall, the thiourea- and urea-derivatized cations yielded the highest distribution ratios, and those for Hg2+ were higher than those for Cd2+; however, a change in aqueous-phase pH does not promote the stripping of metal ions from the extracting phase. The combination of these imidazolium cations and PF6- produced ionic liquids with decreased thermal stability in comparison to [C(n)mim]-[PF6]. Gaussian98 restricted Hartree-Fock geometry optimizations for one of the thiourea-appended cations shows the charge delocalization around the ring and suggests that the thiourea group may aid in deprotonating the imidazolium ring and may be responsible for the lowered thermal stability of these cations.

Synthesis and metal-ion binding properties of monoazathiacrown ethers

Synthetic procedures for monoazathiacrown ethers were explored, and monoazatrithia-12-crown-4, monoazatetrathia-15-crown-5, and monoazapentathia-18-crown-6 were obtained in moderate yields by the reaction of bis(2-chloroethyl)amine with the appropriate dithiols in the presence of lithium hydroxide in THF. To evaluate metal-ion binding properties of the monoazathiacrown ethers by solvent extraction, lipophilic dodecyl and dodecanoyl groups were incorporated onto the monoazathiacrown ethers. The solvent extraction experiments suggested that monoazathiacrown ethers have Ag(+) and Hg(2+) selectivities and that the relative selectivity between Ag(+) and Hg(2+) depends on their nitrogen atom properties and numbers of sulfur atoms reflecting the respective affinities of nitrogen and sulfur atoms to Hg(2+) and Ag(+). An interesting ability to bind Mg(2+) was observed in the case of N-dodecyl monoazatrithia-12-crown-4.