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Baletska S, Techert S, Velazquez-Garcia JDJ. Crystal structure of 2-methyl-1 H-imidazol-3-ium 3,5-di-carb-oxy-benzoate. Acta Crystallogr E Crystallogr Commun 2023; 79:1088-1092. [PMID: 37936847 PMCID: PMC10626955 DOI: 10.1107/s2056989023009209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 10/19/2023] [Indexed: 11/09/2023]
Abstract
The structure of the title salt, C4H7N2 +·C9H5O6 - (1), is reported. The compound is built from a protonated 2-methyl-imidazole and a singly deprotonated trimesic acid. Detailed analysis of bond distances and angles for both ions reveals subtle differences compared with their neutral mol-ecule counterpart. Analysis of the crystal packing in compound 1 reveals the formation of undulating chains by the ions through hydrogen bonding. The chains stack along the b axis through π-π inter-actions and inter-connect with other chains in an out-of-phase arrangement along the ac plane through further hydrogen-bonding inter-actions.
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Affiliation(s)
- Sofiia Baletska
- School of Physics, V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv 61022, Ukraine
| | - Simone Techert
- Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
- Institut für Röntgenphysik, Georg-August-Universität Göttingen, Friedrich-Hund-Platz 1, Göttingen, 37077, Germany
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Zhang SY, Yuan WZ, Liu B, Yue KF, Yan N, Zhang SH, Yang J. Synthesis, structures, and thermodynamics/kinetics properties of three Zn(II) coordination polymers modified by 5-substituted isophthalic acid. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.10.051] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Febuxostat-Minoxidil Salt Solvates: Crystal Structures, Characterization, Interconversion and Solubility Performance. CRYSTALS 2018. [DOI: 10.3390/cryst8020085] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Som B, Shue JR, Smith MD, Shimizu LS. Temperature-induced pseudopolymorphism of molecular salts from a pyridyl bis-urea macrocycle and naphthalene-1,5-disulfonic acid. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2018; 74:75-81. [PMID: 29303500 DOI: 10.1107/s2053229617017600] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Accepted: 12/08/2017] [Indexed: 11/10/2022]
Abstract
Molecular salts, often observed as cocrystals, play an important role in the fields of pharmaceutics and materials science, where salt formation is used to tune the properties of active pharmaceutical ingredients (APIs) and improve the stability of solid-state materials. Salt formation via a proton-transfer reaction typically alters hydrogen-bonding motifs and influences supramolecular assembly patterns. We report here the molecular salts formed by the pyridyl bis-urea macrocycle 3,5,13,15,21,22-hexaazatricyclo[15.3.1.17,11]docosa-1(21),7(22),8,10,17,19-hexaene-4,14-dione, (1), and naphthalene-1,5-disulfonic acid (H2NDS) as two salt cocrystal solvates, namely 4,14-dioxo-3,5,13,15,21,22-hexaazatricyclo[15.3.1.17,11]docosa-1(21),7(22),8,10,17,19-hexaene-21,22-diium naphthalene-1,5-disulfonate dimethyl sulfoxide disolvate, C16H20N6O22+·C10H6O6S22-·2C2H6OS, (2), and the corresponding monosolvate, C16H20N6O22+·C10H6O6S22-·C2H6OS, (3). This follows the ΔpKa rule such that there is a proton transfer from H2NDS to (1), forming the reported molecular salts through hydrogen bonding. Prior to salt formation, (1) is relatively planar and assembles into columnar structures. The salt cocrystal solvates were obtained upon slow cooling of dimethyl sulfoxide-acetonitrile solutions of the molecular components from two temperatures (363 and 393 K). The proton transfer to (1) significantly alters the conformation of the macrocycle, changing the formerly planar macrocycle into a step-shaped conformation with trans-cis urea groups in (2) or into a bowl-shape conformation with trans-trans urea groups in (3).
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Affiliation(s)
- Bozumeh Som
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Jessica R Shue
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Mark D Smith
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Linda S Shimizu
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
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Zhang XR, Zhang L. Solvent effect on the self-assembly of salt solvates of an antihypertensive drug azilsartan and 2-methylimidazole. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.02.063] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Li HJ, Wang L, Zhao JJ, Sun JF, Sun JL, Wang CH, Hou GG. Synthesis, structure and luminescence of novel co-crystals based on bispyridyl-substituted α , β -unsaturated ketones with coformers. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2014.09.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Chen M, Wang ZW, Zhao H, Liu CS. Three ZnII Coordination Polymers Based on 1,2-Naphthalenedicarboxylate and Different 4,4′-Bipyridyl-like Bridging Co-ligands: Structural Regulation and Properties. Aust J Chem 2015. [DOI: 10.1071/ch14115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Three new ZnII coordination polymers, namely [Zn(ndc)]n (1), {[Zn(ndc)(bpe)]·1.25H2O}n (2), and {[Zn(ndc)(bpee)]·1.25H2O}n (3), were prepared based on in situ reaction of 1,2-naphthalenedicarboxylic anhydride (ndca) with two different 4,4′-bipyridyl-like bridging co-ligands, bpe and bpee (ndc = 1,2-naphthalenedicarboxylate, bpe = 1,2-bis(4-pyridyl)ethane, and bpee = trans-1,2-bis(4-pyridyl)ethylene). In 1, the ZnII and ndc ligands are directly involved in the polymeric frameworks, forming a 2D (43.63) layered network. Complexes 2 and 3 similarly consist of Zn2(ndc)2 binuclear units that are linked by bpe and bpee ligands, respectively, into a 2D (44.62) sheet. However, further analysis indicates that 2 and 3 feature the similar 2-fold interpenetrating structure linked via hydrogen bonding interactions for 2 and aromatic stacking interactions for 3. In addition, the resultant 2D→3D supramolecular frameworks of 2 and 3 are both constructed via aromatic stacking interactions. Also, the fluorescent and thermal properties of the complexes were investigated.
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Liu TP, Huo LH, Deng ZP, Zhao H, Gao S. Supramolecular architectures and luminescent properties of the salts containing flexible bis(pyridyl) cations with aliphatic diamine spacer: effects of inorganic anions, alkalinity and conformation of the bis(pyridyl) cations. RSC Adv 2014. [DOI: 10.1039/c4ra05029k] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
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Wan CQ, Li AM, Al-Thabaiti SA, El-Mosslamy ESH, Mak TCW. Efficient solvent-controlled crystallization of pure polymorphs of 1-nitro-4-(4-nitrophenylmethylthio)benzene. CrystEngComm 2014. [DOI: 10.1039/c4ce00753k] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Trimer formation of 6-methyl-1,3,5-triazine-2,4-diamine in salt with organic and inorganic acids: analysis of supramolecular architecture. Sci China Chem 2014. [DOI: 10.1007/s11426-014-5101-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Nowak AM, Kurc T, Janczak J, Videnova-Adrabinska V. Synthesis and structural analysis of alkylammonium sulfoisophthalates: cation size and geometry effects on the hydrogen bonded network. CrystEngComm 2014. [DOI: 10.1039/c3ce41526k] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Wang L, Xue R, Li Y, Zhao Y, Liu F, Huang K. Hydrogen-bonding patterns in a series of multi-component molecular solids formed by 2,3,5,6-tetramethylpyrazine with selected carboxylic acids. CrystEngComm 2014. [DOI: 10.1039/c4ce00749b] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydrogen-bonding patterns in a series of cocrystals of 2,3,5,6-tetramethylpyrazine with selected carboxylic acids are discussed.
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Affiliation(s)
- Lei Wang
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Ruiyu Xue
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Yuanxin Li
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Yiran Zhao
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Faqian Liu
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Keke Huang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- Jilin University
- Changchun, PR China
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Hou GG, Zhao HJ, Sun JF, Lin D, Dai XP, Han JT, Zhao H. Synthesis, structure and luminescence of Co-crystals with hexagonal channels: arranging disposition and π–π interactions. CrystEngComm 2013. [DOI: 10.1039/c2ce25759a] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Zhang ZY, Deng ZP, Huo LH, Zhao H, Gao S. Inorganic anion induced supramolecular architectures of flexible unsymmetrical bis(pyridyl) ionic salts mediated by various non-covalent interactions. CrystEngComm 2013. [DOI: 10.1039/c3ce40227d] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Singh UP, Kashyap S, Butcher RJ, Singh HJ, Mishra BK. Effect of electron donating substituents on supramolecular structure of salts having phenylphosphonic acid and pyrazoles. Struct Chem 2011. [DOI: 10.1007/s11224-011-9781-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Halasz I, Rubčić M, Užarević K, Đilović I, Meštrović E. The cocrystal of 4-oxopimelic acid and 4,4′-bipyridine: polymorphism and solid-state transformations. NEW J CHEM 2011. [DOI: 10.1039/c0nj00569j] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Deng ZP, Qi HL, Huo LH, Zhao H, Gao S. Inorganic anion induced supramolecular architectures and luminescent properties of flexible bis(pyridyl) based ionic salts. CrystEngComm 2011. [DOI: 10.1039/c1ce05628j] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Silver(I) complexes with a bulky acridine-based carboxylic ligand: Syntheses, crystal structures, and luminescent properties. J Mol Struct 2009. [DOI: 10.1016/j.molstruc.2009.05.029] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Chen Q, Zhou YL, Zeng MH. Shape recognition and cooperative magnetic behaviors observed in a chiral 3D coordination polymer containing mixed geometries cobalt(II) dimers linked by isonicotinate and d-(+)-camphorate. J Mol Struct 2009. [DOI: 10.1016/j.molstruc.2009.05.040] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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