1
|
Abid R, Khan M, Siddique N, Khan SW, Khan RU, Zahoor M, Ullah R, Alotaibi A. Novel chiral phthalimides: Antimicrobial evaluation and docking study against Acinetobacter baumannii's OmpA protein. Comput Biol Med 2024; 182:109099. [PMID: 39265475 DOI: 10.1016/j.compbiomed.2024.109099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 08/29/2024] [Accepted: 08/31/2024] [Indexed: 09/14/2024]
Abstract
Antibiotics have been a vital component in the fight against microbial diseases for over 75 years, saving countless lives. However, the global rise of multi-drug-resistance (MDR) bacterial infections is pushing us closer to a post-antibiotic era where common infections may once again become lethal. To combat MDR Acinetobacter baumannii, we investigated chiral phthalimides and used molecular docking to identify potential targets. Outer membrane protein A (OmpA) is crucial for A. baumannii resistant to antibiotics, making it a pathogen of great concern due to its high mortality rate and limited treatment options. In this study, we evaluated three distinct compounds against the OmpA protein: FIA (2-(1,3-dioxoindolin-2yl)-3-phenylpropanoic acid), FIC (2-(1,3-dioxoindolin-2yl)-4-(methylthio) butanoic acid), and FII (3-(1,3-dioxoindolin-2yl)-3-phenylpropanoic acid). Molecular docking results showed that these three compounds exhibited strong interactions with the OmpA protein. Molecular dynamics (MD) simulation analysis further confirmed the stability and binding efficacy of these compounds with OmpA. Their antimicrobial activities were assessed using the agar well diffusion method, revealing that FIA had an optimal zone of inhibition of 24 mm. Additionally, the minimum inhibitory concentrations (MIC) of these compounds were determined, demonstrating their bactericidal properties against A. baumannii, with MICs of 11 μg/μL for FIA, 46 μg/μL for FIC, and 375 μg/μL for FII. In vitro cytotoxicity data indicated that none of the three compounds were hemolytic when exposed to human red blood cells. This finding is particularly significant as it highlights the superior efficacy of FIA against A. baumannii compared to the other compounds. With thorough pharmacokinetic validations, these chiral phthalimides are promising alternative therapeutic options for treating infections caused by A. baumannii, offering new hope in the face of rising antibiotic resistance.
Collapse
Affiliation(s)
- Rimsha Abid
- Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan.
| | - Momin Khan
- Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan.
| | - Nayyer Siddique
- Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan.
| | - Sher Wali Khan
- Department of Chemistry, Rawalpindi Women University, Rawalpindi, 46300, Pakistan.
| | - Rahat Ullah Khan
- CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Center for Influenza Research and Early-warning (CASCIRE), CAS-TWAS Center of Excellence for Emerging Infectious Diseases (CEEID, Chinese Academy of Sciences, 100101, Beijing, China; College of Life Science, University of Chinese Academy of Sciences, Beijing, 101408, China.
| | - Muhammad Zahoor
- Department of Biochemistry, University of Malakand, Chakdara, 18800, Pakistan.
| | - Riaz Ullah
- Medicinal Aromatic and Poisonous Plants Research Center, Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, 11451, Saudi Arabia.
| | - Amal Alotaibi
- Department of Basic Science, College of Medicine, Princess Nourah bint Abdulrahman University, Riyadh, 11671, Saudi Arabia.
| |
Collapse
|
2
|
Krüger K, Lüdke V, Pettinger J, Ashton L, Bonnet L, Motti CA, Lex J, Oelgemöller M. Photochemical synthesis of cyclic peptide models from phthalimido acetamides and phthaloyl dipeptide esters. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.02.074] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
3
|
Functionalized organic frameworks explored as second order NLO agents. J CHEM SCI 2016. [DOI: 10.1007/s12039-015-1012-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
|
4
|
Singh AK, Rajendran V, Pant A, Ghosh PC, Singh N, Latha N, Garg S, Pandey KC, Singh BK, Rathi B. Design, synthesis and biological evaluation of functionalized phthalimides: A new class of antimalarials and inhibitors of falcipain-2, a major hemoglobinase of malaria parasite. Bioorg Med Chem 2015; 23:1817-27. [DOI: 10.1016/j.bmc.2015.02.029] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2014] [Revised: 02/09/2015] [Accepted: 02/17/2015] [Indexed: 10/23/2022]
|
5
|
Singh AK, Kishan R, Bahadur V, Vijayan N, Balachandran V, Tiwari HK, Singh BK, Rathi B. Synthesis, structural aspects and nonlinear optical properties of novel phthalimide derivatives: theoretical and experimental approach. J PHYS ORG CHEM 2014. [DOI: 10.1002/poc.3287] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Anil K. Singh
- Bio-organic Research Laboratory University of Delhi; Delhi -110 007 India
| | - Ram Kishan
- Department of Chemistry; University of Delhi; Delhi 110 007 India
| | - Vijay Bahadur
- Bio-organic Research Laboratory University of Delhi; Delhi -110 007 India
| | - Narayanasamy Vijayan
- CSIR-National Physical Laboratory; Dr. K. S. Krishnan Road New Delhi 110 012 India
| | - Vadivelu Balachandran
- PG & Research Department of Physics; Aringer Anna Government Arts College; Musiri 621 211 India
| | - Hemandra K. Tiwari
- Bio-organic Research Laboratory University of Delhi; Delhi -110 007 India
| | - Brajendra K. Singh
- Bio-organic Research Laboratory University of Delhi; Delhi -110 007 India
| | - Brijesh Rathi
- Bio-organic Research Laboratory University of Delhi; Delhi -110 007 India
- Department of Chemistry, Sri Venkateswara College; University of Delhi; New Delhi 110021 India
| |
Collapse
|