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Radiationless deactivation pathways versus H-atom elimination from the N-H bond photodissociation in PhNH 2-(Py) n (n = 1,2) complexes. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES : OFFICIAL JOURNAL OF THE EUROPEAN PHOTOCHEMISTRY ASSOCIATION AND THE EUROPEAN SOCIETY FOR PHOTOBIOLOGY 2023; 22:33-45. [PMID: 36071272 DOI: 10.1007/s43630-022-00295-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Accepted: 08/19/2022] [Indexed: 01/12/2023]
Abstract
Minimum energy structures of the ground and lowest excited states of aniline (PhNH2) solvated by pyridine (Py) show that the clusters formed are stabilized by hydrogen bonds in which only one or both hydrogen atoms of the NH2 group take part. Two different N-H bonds photodissociation in PhNH2-(Py)n (n = 1,2) complexes, free and hydrogen bonded have been studied by analyzing excited state potential energy surfaces. In the first one, only N-H bonds engaged in hydrogen bonding in these complexes are considered. RICC2 calculations of potential energy (PE) profiles indicate that all photochemical reaction paths along N-H stretching occur mainly via the proton-coupled electron transfer (PCET) mechanism. The repulsive charge transfer 1ππ*(CT) state dominates the PE profiles, leading to low-lying 1ππ*(CT)/S0 conical intersections and thus provide channels for ultrafast radiationless deactivation of the electronic excitation or stabilization to biradical complexes. The second photoreaction consists of a direct dissociation along the free N-H bond of the NH2 group. It has been shown that this process is played by excited singlet states of 1πσ* character having repulsive potential energy profiles with respect to the stretching of N-H bond, which dissociates over an exit barrier about 0.5 eV giving rise to the formation of a 1πσ*/S0 conical intersection. This may cause an internal conversion to the ground state or may lead to H-atom elimination. This photophysical process is the same in both planar and T-shaped conformers of the PhNH2-Py monomer complex. Our findings reveal that there is no single dominating path in the photodissociation of N-H bonds in PhNH2-(Py)n complexes, but rather a variety of paths involving H-atom elimination and several quenching mechanisms.
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Vinklárek IS, Rakovský J, Poterya V, Fárník M. Clustering and multiphoton effects in velocity map imaging of methyl chloride. Mol Phys 2020. [DOI: 10.1080/00268976.2020.1823507] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- I. S. Vinklárek
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
- Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
| | - J. Rakovský
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
| | - V. Poterya
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
| | - M. Fárník
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
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Vinklárek IS, Rakovský J, Poterya V, Fárník M. Different Dynamics of CH3 and Cl Fragments from Photodissociation of CH3Cl in Clusters. J Phys Chem A 2020; 124:7633-7643. [DOI: 10.1021/acs.jpca.0c05926] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ivo S. Vinklárek
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 2155/3, 182 23 Prague 8, Czech Republic
- Faculty of Mathematics and PhysicsCharles UniversityKe Karlovu 3121 16Prague 2Czech Republic
| | - Jozef Rakovský
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 2155/3, 182 23 Prague 8, Czech Republic
| | - Viktoriya Poterya
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 2155/3, 182 23 Prague 8, Czech Republic
| | - Michal Fárník
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 2155/3, 182 23 Prague 8, Czech Republic
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West CW, Nishitani J, Higashimura C, Suzuki T. Extreme ultraviolet time-resolved photoelectron spectroscopy of aqueous aniline solution: enhanced surface concentration and pump-induced space charge effect. Mol Phys 2020. [DOI: 10.1080/00268976.2020.1748240] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Christopher W. West
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
| | - Junichi Nishitani
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
| | - Chika Higashimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
| | - Toshinori Suzuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
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Jhang WR, Lai HY, Lin YC, Lee C, Lee SH, Lee YY, Ni CK, Tseng CM. Triplet vs πσ* state mediated N–H dissociation of aniline. J Chem Phys 2019; 151:141101. [DOI: 10.1063/1.5121350] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Affiliation(s)
- Wan Ru Jhang
- Department of Applied Chemistry, National Chiao Tung University, Hsinchu 30010, Taiwan
| | - Hsin Ying Lai
- Department of Applied Chemistry, National Chiao Tung University, Hsinchu 30010, Taiwan
| | - Yen-Cheng Lin
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 10617, Taiwan
| | - Chin Lee
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 10617, Taiwan
| | - Shih-Huang Lee
- National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan
| | - Yin-Yu Lee
- National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan
| | - Chi-Kung Ni
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 10617, Taiwan
- Department of Chemistry, National Tsing Hua University, Hsinchu 30013, Taiwan
| | - Chien-Ming Tseng
- Department of Applied Chemistry, National Chiao Tung University, Hsinchu 30010, Taiwan
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Montero R, Lamas I, León I, Fernández JA, Longarte A. Excited state dynamics of aniline homoclusters. Phys Chem Chem Phys 2019; 21:3098-3105. [PMID: 30672912 DOI: 10.1039/c8cp06416d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We have investigated the relaxation, following excitation in the 290-235 nm region, of neutral aniline homoclusters (An)n formed in a supersonic expansion by femtosecond time resolved ionization. The applied method permits isolation of the dynamics of the dimer from that originated in bigger species of the generated distribution. Interestingly, and differently from the monomer and (An)n≥3 clusters, the dimer does not present a N-H dissociative 1πσ* channel. This fact can be explained in terms of the symmetric structure adopted, in which each molecule establishes two N-Hπ interactions, destabilizing the H dissociation channel. The observations permit relating the photophysics to the interactions established by the aniline units and confirming previous observations and theoretical predictions on the structure of aniline aggregates.
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Affiliation(s)
- Raúl Montero
- SGIker Laser Facility, UPV/EHU, Sarriena, s/n, Leioa 48940, Spain
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7
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Ray J, Ramesh SG. Conical intersections involving the lowest 1πσ∗ state in aniline: Role of the NH2 group. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.03.015] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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8
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Fárník M, Lengyel J. Mass spectrometry of aerosol particle analogues in molecular beam experiments. MASS SPECTROMETRY REVIEWS 2018; 37:630-651. [PMID: 29178389 DOI: 10.1002/mas.21554] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Accepted: 10/25/2017] [Indexed: 05/26/2023]
Abstract
Nanometer-size particles such as ultrafine aerosol particles, ice nanoparticles, water nanodroplets, etc, play an important, however, not yet fully understood role in the atmospheric chemistry and physics. These species are often composed of water with admixture of other atmospherically relevant molecules. To mimic and investigate such particles in laboratory experiments, mixed water clusters with atmospherically relevant molecules can be generated in molecular beams and studied by various mass spectrometric methods. The present review demonstrates that such experiments can provide unprecedented details of reaction mechanisms, and detailed insight into the photon-, electron-, and ion-induced processes relevant to the atmospheric chemistry. After a brief outline of the molecular beam preparation, cluster properties, and ionization methods, we focus on the mixed clusters with various atmospheric molecules, such as hydrated sulfuric acid and nitric acid clusters, Nx Oy and halogen-containing molecules with water. A special attention is paid to their reactivity and solvent effects of water molecules on the observed processes.
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Affiliation(s)
- Michal Fárník
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
| | - Jozef Lengyel
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Innsbruck, Austria
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Grygoryeva K, Rakovský J, Votava O, Fárník M. Imaging of rotational wave-function in photodissociation of rovibrationally excited HCl molecules. J Chem Phys 2018; 147:013901. [PMID: 28688430 DOI: 10.1063/1.4973680] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We demonstrate a visualization of quantum mechanical phenomena with the velocity map imaging (VMI) technique, combining vibrationally mediated photodissociation (VMP) of a simple diatomic HCl with the VMI of its H-photofragments. Free HCl molecules were excited by a pump infrared (IR) laser pulse to particular rotational J levels of the v = 2 vibrational state, and subsequently a probe ultraviolet laser photodissociated the molecule at a fixed wavelength of 243.07 nm where also the H-fragments were ionized. The molecule was aligned by the IR excitation with respect to the IR laser polarization, and this alignment was reflected in the angular distribution of the H-photofragments. In particular, the highest degree of molecular alignment was achieved for the J=1←0 transition, which exclusively led to the population of a single rotational state with M = 0. The obtained images were analyzed for further details of the VMP dynamics, and different J states were studied as well. Additionally, we investigated the dynamic evolution of the excited states by changing the pump-probe laser pulse delay; the corresponding images reflected dephasing due to a coupling between the molecular angular momentum and nuclear spin. Our measurements confirmed previous observation using the time-of-flight technique by Sofikitis et al. [J. Chem. Phys. 127, 144307 (2007)]. We observed a partial recovery of the originally excited state after 60 ns in agreement with the previous observation.
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Affiliation(s)
- K Grygoryeva
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - J Rakovský
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - O Votava
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - M Fárník
- J. Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
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Pysanenko A, Kočišek J, Nachtigallová D, Poterya V, Fárník M. Clustering of Uracil Molecules on Ice Nanoparticles. J Phys Chem A 2017; 121:1069-1077. [PMID: 28098464 DOI: 10.1021/acs.jpca.6b12594] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We generate a molecular beam of ice nanoparticles (H2O)N, N̅ ≈ 130-220, which picks up several individual gas phase uracil (U) or 5-bromouracil (BrU) molecules. The mass spectra of the doped nanoparticles prove that the uracil and bromouracil molecules coagulate to clusters on the ice nanoparticles. Calculations of U and BrU monomers and dimers on the ice nanoparticles provide theoretical support for the cluster formation. The (U)mH+ and (BrU)mH+ intensity dependencies on m extracted from the mass spectra suggest a smaller tendency of BrU to coagulate compared to U, which is substantiated by a lower mobility of bromouracil on the ice surface. The hydrated Um·(H2O)nH+ series are also reported and discussed. On the basis of comparison with the previous experiments, we suggest that the observed propensity for aggregation on ice nanoparticles is a more general trend for biomolecules forming strong hydrogen bonds. This, together with their mobility, leads to their coagulation on ice nanoparticles which is an important aspect for astrochemistry.
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Affiliation(s)
- Andriy Pysanenko
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3, 182 23 Prague, Czech Republic
| | - Jaroslav Kočišek
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3, 182 23 Prague, Czech Republic
| | - Dana Nachtigallová
- Institute of Organic Chemistry and Biochemistry v.v.i., The Czech Academy of Sciences , Flemingovo nám. 2, 160610 Prague 6, Czech Republic
| | - Viktoriya Poterya
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3, 182 23 Prague, Czech Republic
| | - Michal Fárník
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3, 182 23 Prague, Czech Republic
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Montero R, León I, Fernández JA, Longarte A. Femtosecond Excited State Dynamics of Size Selected Neutral Molecular Clusters. J Phys Chem Lett 2016; 7:2797-2802. [PMID: 27388417 DOI: 10.1021/acs.jpclett.6b00997] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The work describes a novel experimental approach to track the relaxation dynamics of an electronically excited distribution of neutral molecular clusters formed in a supersonic expansion, by pump-probe femtosecond ionization. The introduced method overcomes fragmentation issues and makes possible to retrieve the dynamical signature of a particular cluster from each mass channel, by associating it to an IR transition of the targeted structure. We have applied the technique to study the nonadiabatic relaxation of pyrrole homoclusters. The results obtained exciting at 243 nm, near the origin of the bare pyrrole electronic absorption, allow us to identify the dynamical signature of the dimer (Py)2, which exhibits a distinctive lifetime of τ1 ∼ 270 fs, considerably longer than the decays recorded for the monomer and bigger size clusters (Py)n>2. A possible relationship between the measured lifetime and the clusters geometries is tentatively discussed.
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Affiliation(s)
- Raúl Montero
- SGIker Laser Facility, UPV/EHU , Sarriena, s/n, 48940 Leioa, Spain
| | - Iker León
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU) , Apartment 644, 48080 Bilbao, Spain
| | - José A Fernández
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU) , Apartment 644, 48080 Bilbao, Spain
| | - Asier Longarte
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU) , Apartment 644, 48080 Bilbao, Spain
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Rubovič P, Pysanenko A, Lengyel J, Nachtigallová D, Fárník M. Biomolecule Analogues 2-Hydroxypyridine and 2-Pyridone Base Pairing on Ice Nanoparticles. J Phys Chem A 2016; 120:4720-30. [PMID: 26785038 DOI: 10.1021/acs.jpca.5b11359] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Ice nanoparticles (H2O)N, N ≈ 450 generated in a molecular beam experiment pick up individual gas phase molecules of 2-hydroxypyridine and 2-pyridone (HP) evaporated in a pickup cell at temperatures between 298 and 343 K. The mass spectra of the doped nanoparticles show evidence for generation of clusters of adsorbed molecules (HP)n up to n = 8. The clusters are ionized either by 70 eV electrons or by two photons at 315 nm (3.94 eV). The two ionization methods yield different spectra, and their comparison provides an insight into the neutral cluster composition, ionization and intracluster ion-molecule reactions, and cluster fragmentation. Quite a few molecules were reported not to coagulate on ice nanoparticles previously. The (HP)n cluster generation on ice nanoparticles represents the first evidence for coagulating of molecules and cluster formation on free ice nanoparticles. For comparison, we investigate the coagulation of HP molecules picked up on large clusters ArN, N ≈ 205, and also (HP)n clusters generated in supersonic expansions with Ar buffer gas. This comparison points to a propensity for the (HP)2 dimer generation on ice nanoparticles. This shows the feasibility of base pairing for model of biological molecules on free ice nanoparticles. This result is important for hypotheses of the biomolecule synthesis on ice grains in the space. We support our findings by theoretical calculations that show, among others, the HP dimer structures on water clusters.
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Affiliation(s)
- Peter Rubovič
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences, Dolejškova 3, 182 23 Prague, Czech Republic
| | - Andriy Pysanenko
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences, Dolejškova 3, 182 23 Prague, Czech Republic
| | - Jozef Lengyel
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences, Dolejškova 3, 182 23 Prague, Czech Republic
| | - Dana Nachtigallová
- Institute of Organic Chemistry and Biochemistry v.v.i., The Czech Academy of Sciences, Flemingovo nám. 2, 16610 Prague 6, Czech Republic
| | - Michal Fárník
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences, Dolejškova 3, 182 23 Prague, Czech Republic
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13
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Grygoryeva K, Kubečka J, Pysanenko A, Lengyel J, Slavíček P, Fárník M. Photochemistry of Nitrophenol Molecules and Clusters: Intra- vs Intermolecular Hydrogen Bond Dynamics. J Phys Chem A 2016; 120:4139-46. [DOI: 10.1021/acs.jpca.6b04459] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Kateryna Grygoryeva
- J.
Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
- Department
of Physical Chemistry, University of Chemistry and Technology Prague, Technická 5, Prague 6, Czech Republic
| | - Jakub Kubečka
- Department
of Physical Chemistry, University of Chemistry and Technology Prague, Technická 5, Prague 6, Czech Republic
| | - Andriy Pysanenko
- J.
Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - Jozef Lengyel
- J.
Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
| | - Petr Slavíček
- J.
Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
- Department
of Physical Chemistry, University of Chemistry and Technology Prague, Technická 5, Prague 6, Czech Republic
| | - Michal Fárník
- J.
Heyrovský Institute of Physical Chemistry v.v.i., Academy of Sciences of the Czech Republic, Dolejškova 3, 18223 Prague, Czech Republic
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