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Wang T, Zhu X, Tao Q, Xu W, Sun H, Wu P, Cheng B, Zhai H. Synthesis of tetrasubstituted thiophenes from pyridinium 1,4-zwitterionic thiolates and modified activated alkynes. CHINESE CHEM LETT 2021. [DOI: 10.1016/j.cclet.2021.04.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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2
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Elagamy A, Althagafi I, Pratap R. Step-wise and one-pot synthesis of highly substituted conjugated trienes from 2-oxobenzo[ h]chromenes/2 H-pyran-2-ones. Org Biomol Chem 2021; 19:3901-3910. [PMID: 33949600 DOI: 10.1039/d1ob00314c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A mild and efficient route for the synthesis of conjugated trienes via nitroethane-mediated ring contraction of 2-oxobenzo[h]chromenes/2H-pyran-2-ones followed by decarboxylative rearrangement of the obtained spirobutenolides and butenolides is described. The (E)-isomer of trienes was obtained by step-wise and one-pot approaches from 2-oxobenzo[h]chromenes. Butenolides 4a-l as new substrates have been developed for the construction of trienes. The mixture of the (E)- and (Z)-isomers of spirobutenolides undergoes decarboxylative rearrangement in the presence of sodium ethoxide as a base to yield the (E)-isomer of trienes, while the (E)-isomer of butenolides reacts to give a mixture of (2E,4E)- and (2E,4Z)-isomers of trienes in an almost steady ratio of 45 : 55 or 1 : 1.2. The structure and geometry of the obtained butenolides and trienes were confirmed by single-crystal X-ray analysis.
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Affiliation(s)
- Amr Elagamy
- Department of Chemistry, University of Delhi, North Campus, Delhi, 110007, India.
| | - Ismail Althagafi
- Chemistry Department, Faculty of Science, Umm Al-Qura University, 21955 Makkah, Saudi Arabia
| | - Ramendra Pratap
- Department of Chemistry, University of Delhi, North Campus, Delhi, 110007, India.
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Cheng B, Duan X, Li Y, Zhang X, Li H, Wu F, Li Y, Wang T, Zhai H. Development and Application of Pyridinium 1,4-Zwitterionic Thiolates: Synthesis of Polysubstituted Thiophenes. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000165] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Bin Cheng
- Shenzhen Polytechnic; Institute of Marine Biomedicine; 518055 Shenzhen China
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Xiaoguang Duan
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Yuntong Li
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Xinping Zhang
- Shenzhen Polytechnic; Institute of Marine Biomedicine; 518055 Shenzhen China
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Hui Li
- Shenzhen Polytechnic; Institute of Marine Biomedicine; 518055 Shenzhen China
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Fufang Wu
- School of Chemistry and Materials Engineering; Fuyang Normal University; 236037 Fuyang China
| | - Yun Li
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
| | - Taimin Wang
- Shenzhen Polytechnic; Institute of Marine Biomedicine; 518055 Shenzhen China
| | - Hongbin Zhai
- Shenzhen Polytechnic; Institute of Marine Biomedicine; 518055 Shenzhen China
- State Key Laboratory of Applied Organic Chemistry; College of Chemistry and Chemical Engineering; Lanzhou University; 730000 Lanzhou China
- State Key Laboratory of Chemical Oncogenomics; Shenzhen Engineering Laboratory of Nano Drug Slow-Release; Peking University Shenzhen Graduate School; 518055 Shenzhen China
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Cheng B, Zhang X, Li Y, Li H, He Y, Li Y, Wang T, Zhai H. Synthesis of indolizines from pyridinium 1,4-zwitterionic thiolates and α-functionalized bromoalkanes via a stepwise [(5+1)−1] pathway. Chem Commun (Camb) 2020; 56:8396-8399. [DOI: 10.1039/d0cc03446k] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Pyridinium 1,4-zwitterionic thiolates were applied to accessing indolizines via a sequence of annulation, oxidation and ring-contraction/desulfuration.
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Affiliation(s)
- Bin Cheng
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
- State Key Laboratory of Applied Organic Chemistry
| | - Xinping Zhang
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
- State Key Laboratory of Applied Organic Chemistry
| | - Yuntong Li
- State Key Laboratory of Applied Organic Chemistry
- College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
- China
| | - Hui Li
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
- State Key Laboratory of Applied Organic Chemistry
| | - Yixuan He
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
- State Key Laboratory of Applied Organic Chemistry
| | - Yun Li
- State Key Laboratory of Applied Organic Chemistry
- College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
- China
| | - Taimin Wang
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
| | - Hongbin Zhai
- Institute of Marine Biomedicine
- Shenzhen Polytechnic
- Shenzhen 518055
- China
- State Key Laboratory of Applied Organic Chemistry
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5
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Crystal Structure and Computational Study on Methyl-3-Aminothiophene-2-Carboxylate. CRYSTALS 2020. [DOI: 10.3390/cryst10010019] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Methyl-3-aminothiophene-2-carboxylate (matc) is a key intermediate in organic synthesis, medicine, dyes, and pesticides. Single crystal X-ray diffraction analysis reveals that matc crystallizes in the monoclinic crystal system P21/c space group. Three matc molecules in the symmetric unit are crystallographically different and further linked through the N–H⋯O and N–H⋯N hydrogen bond interactions along with weak C–H⋯S and C–H⋯Cg interactions, which is verified by the three-dimensional Hirshfeld surface, two-dimensional fingerprint plot, and reduced density gradient (RDG) analysis. The interaction energies within crystal packing are visualized through dispersion, electrostatic, and total energies using three-dimensional energy-framework analyses. The dispersion energy dominates in crystal packing. To better understand the properties of matc, electrostatic potential (ESP) and frontier molecular orbitals (FMO) were also calculated and discussed. Experimental and calculation results suggested that amino and carboxyl groups can participate in various inter- and intra-interactions.
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Palani V, Hugelshofer CL, Sarpong R. A Unified Strategy for the Enantiospecific Total Synthesis of Delavatine A and Formal Synthesis of Incarviatone A. J Am Chem Soc 2019; 141:14421-14432. [DOI: 10.1021/jacs.9b07693] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Vignesh Palani
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| | - Cedric L. Hugelshofer
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
| | - Richmond Sarpong
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
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Yadav DK, Kumar S, Saloni, Misra S, Yadav L, Teli M, Sharma P, Chaudhary S, Kumar N, Choi EH, Kim HS, Kim MH. Molecular Insights into the Interaction of RONS and Thieno[3,2-c]pyran Analogs with SIRT6/COX-2: A Molecular Dynamics Study. Sci Rep 2018; 8:4777. [PMID: 29556059 PMCID: PMC5859274 DOI: 10.1038/s41598-018-22972-9] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 03/05/2018] [Indexed: 01/21/2023] Open
Abstract
SIRT6 and COX-2 are oncogenes target that promote the expression of proinflammatory and pro-survival proteins through a signaling pathway, which leads to increased survival and proliferation of tumor cells. However, COX-2 also suppresses skin tumorigenesis and their relationship with SIRT6, making it an interesting target for the discovery of drugs with anti-inflammatory and anti-cancer properties. Herein, we studied the interaction of thieno[3,2-c]pyran analogs and RONS species with SIRT6 and COX-2 through the use of molecular docking and molecular dynamic simulations. Molecular docking studies revealed the importance of hydrophobic and hydrophilic amino acid residues for the stability. The molecular dynamics study examined conformational changes in the enzymes caused by the binding of the substrates and how those changes affected the stability of the protein-drug complex. The average RMSD values of the backbone atoms in compounds 6 and 10 were calculated from 1000 ps to 10000 ps and were found to be 0.13 nm for both compounds. Similarly, the radius of gyration values for compounds 6 and 10 were found to be 1.87 ± 0.03 nm and 1.86 ± 0.02 nm, respectively. The work presented here, will be of great help in lead identification and optimization for early drug discovery.
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Affiliation(s)
- Dharmendra K Yadav
- College of Pharmacy, Gachon University of Medicine and Science, 191, Hambangmoe-ro, Yeonsu-gu, Incheon, 21936, Republic of Korea.
| | - Surendra Kumar
- College of Pharmacy, Gachon University of Medicine and Science, 191, Hambangmoe-ro, Yeonsu-gu, Incheon, 21936, Republic of Korea
| | - Saloni
- College of Pharmacy, Gachon University of Medicine and Science, 191, Hambangmoe-ro, Yeonsu-gu, Incheon, 21936, Republic of Korea
| | - Sanjeev Misra
- Department of Biochemistry, All India Institute of Medical Science, Jodhpur, Rajasthan, 342005, India
| | - Lalit Yadav
- Department of Chemistry, Malaviya National Institute of Technology, Jawaharlal Nehru Marg, Jaipur, 302017, India
| | - Mahesh Teli
- Faculty of Biochemistry and Molecular Medicine Aapistie, University of Oulu, 7A, Oulu, 90220, Finland
| | - Praveen Sharma
- Department of Biochemistry, All India Institute of Medical Science, Jodhpur, Rajasthan, 342005, India
| | - Sandeep Chaudhary
- Department of Chemistry, Malaviya National Institute of Technology, Jawaharlal Nehru Marg, Jaipur, 302017, India
| | - Naresh Kumar
- Plasma Bioscience Research Center/Department of Electrical and Biological Physics, Kwangwoon University, 20 Kwangwon-Ro, Nowon-Gu, Seoul, 139-701, Republic of Korea.,Department of Chemistry, Research group PLASMANT, University of Antwerp, BE-2610, Wilrijk-Antwerp, Belgium
| | - Eun Ha Choi
- Plasma Bioscience Research Center/Department of Electrical and Biological Physics, Kwangwoon University, 20 Kwangwon-Ro, Nowon-Gu, Seoul, 139-701, Republic of Korea
| | - Hyung Sik Kim
- School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea
| | - Mi-Hyun Kim
- College of Pharmacy, Gachon University of Medicine and Science, 191, Hambangmoe-ro, Yeonsu-gu, Incheon, 21936, Republic of Korea.
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Yadav P, Shaw R, Elagamy A, Kumar A, Pratap R. Base controlled diverse reactivity of allyl cyanide for synthesis of multi-substituted benzenes. Org Biomol Chem 2018; 16:5465-5473. [DOI: 10.1039/c8ob01270a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A base controlled regioselective 1,6-cyanoallylation of suitably functionalized 2H-pyran-2-ones has been demonstrated for the synthesis of various multi-substituted benzenes through a tandem process.
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Affiliation(s)
- Pratik Yadav
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Ranjay Shaw
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Amr Elagamy
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Abhinav Kumar
- Department of Chemistry
- University of Lucknow
- Lucknow
- India
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Panwar R, Shally S, Shaw R, Elagamy A, Pratap R. Chemoselective synthesis of m-teraryls through ring transformation of 2H-pyran-2-ones by 2-(1-arylethylidene)-malononitriles. Org Biomol Chem 2018; 16:8994-9002. [DOI: 10.1039/c8ob02370k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Base mediated chemoselective synthesis of m-teraryls was carried out by the reaction of 2H-pyran-2-ones and 2-(1-arylethylidene)malononitriles.
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Affiliation(s)
- Rahul Panwar
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Shally Shally
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Ranjay Shaw
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Amr Elagamy
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
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Thimmarayaperumal S, Shanmugam S. Base-Promoted Selective Synthesis of 2 H-Pyranones and Tetrahydronaphthalenes via Domino Reactions. ACS OMEGA 2017; 2:4900-4910. [PMID: 31457769 PMCID: PMC6641896 DOI: 10.1021/acsomega.7b00627] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Accepted: 06/29/2017] [Indexed: 06/10/2023]
Abstract
A highly efficient domino protocol has been developed for the synthesis of 6-aryl-4-(methylthio/amine-1-yl)-2-oxo-2H-pyran-3-carbonitriles and 4-aryl-2-(amine-1-yl)-5,6,7,8-tetrahydronaphthalene-1-carbonitriles from simple and readily available α-aroylketene dithioacetals, malononitrile, secondary amines, and cyclohexanone. This elegant domino process involved consecutive addition-elimination, intramolecular cyclization, and ring opening and closing sequences. Notably, in situ generated 2-imino-4-(methylthio/amine-1-yl)-6-aryl-2H-pyran-3-carbonitrile plays multiple roles in the construction of various novel polyaromatic hydrocarbons.
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11
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Yadav P, Shaw R, Panwar R, Sahu SN, Kumar A, Pratap R. A Base-Mediated 6-exo
-trig versus 6-exo
-dig Carbocyclization Strategy for the Synthesis of Functionalized Biaryl Compounds. ASIAN J ORG CHEM 2017. [DOI: 10.1002/ajoc.201700319] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Pratik Yadav
- Department of Chemistry; University of Delhi, North Campus; Delhi 110007 India
| | - Ranjay Shaw
- Department of Chemistry; University of Delhi, North Campus; Delhi 110007 India
| | - Rahul Panwar
- Department of Chemistry; University of Delhi, North Campus; Delhi 110007 India
| | - Satya Narayan Sahu
- Department of Chemistry; University of Delhi, North Campus; Delhi 110007 India
| | - Abhinav Kumar
- Department of Chemistry; University of Lucknow; Lucknow Uttar Pradesh 226009 India
| | - Ramendra Pratap
- Department of Chemistry; University of Delhi, North Campus; Delhi 110007 India
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Sahu SN, Singh S, Shaw R, Shally S, Ram VJ, Pratap R. One-pot and step-wise synthesis of thieno[3,2-c]pyridin-4-ones. RSC Adv 2016. [DOI: 10.1039/c6ra17315b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
Abstract
Both one pot and step wise synthesis of methyl 3,5-diaminothieno[3,2-c]pyridin-4-one-2-carboxylates6have been delineated by the reaction of 6-aryl-4-methylthio-2H-pyran-2-one-3-carbonitriles3, methyl mercaptoacetate and hydrazine hydrate.
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Affiliation(s)
| | - Surjeet Singh
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Ranjay Shaw
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Shally Shally
- Department of Chemistry
- University of Delhi
- Delhi
- India-110007
| | - Vishnu Ji Ram
- Department of Chemistry
- University of Lucknow
- Lucknow
- India-226009
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