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Lavendomme R, Yamashina M. Antiaromaticity in molecular assemblies and materials. Chem Sci 2024:d4sc05318d. [PMID: 39512924 PMCID: PMC11537289 DOI: 10.1039/d4sc05318d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Accepted: 10/23/2024] [Indexed: 11/15/2024] Open
Abstract
Antiaromatic rings are infamously unstable and difficult to work with but they possess unusual electronic properties that make them interesting for fundamental and applied research. This perspective presents reports on discrete or polymeric assemblies made from antiaromatic building blocks, bound by either covalent linkages or supramolecular interactions. Compared to polymeric materials, discrete assemblies are more commonly studied, but most efforts have been devoted to their preparation and fundamental property studies, whereas applications are scarcely suggested. Future research in the field should focus on developing applications that benefit from the specific properties of antiaromatic rings. On the other hand, the few reports on antiaromatic-based materials hint at a promising future for this class of materials in organic electronics. To guide non-experts, different antiaromatic compounds are evaluated for their suitability as building blocks for larger assemblies.
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Affiliation(s)
- Roy Lavendomme
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB) Avenue F. D. Roosevelt 50, CP160/06 B-1050 Brussels Belgium
- Laboratoire de Résonance Magnétique Nucléaire Haute Résolution, Université libre de Bruxelles (ULB) Avenue F. D. Roosevelt 50, CP160/08 B-1050 Brussels Belgium
| | - Masahiro Yamashina
- Department of Chemistry, School of Science, Institute of Science Tokyo 2-12-1 Ookayama Meguro-ku Tokyo 152-8551 Japan
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2
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Arathi PK, Suresh CH. Direct Estimation of Aromatization Energy from 1H NMR and UV-Vis Absorption Data of Homodesmotic Molecules. J Org Chem 2024; 89:10485-10497. [PMID: 39042814 DOI: 10.1021/acs.joc.4c00668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/25/2024]
Abstract
This study delves into the ring-opening reaction of two distinct diaryl-ring-pyran systems, referred to as drnp1 and drnp2, where the term 'ring' encompasses aromatic, nonaromatic, or antiaromatic motifs. These systems transform into the corresponding cis-ortho quinonoid systems, denoted as c-drnq1 and c-drnq2. Homodesmotic pairs (drnp1, drnp2) and (c-drnq1, c-drnq2) are categorized as (aromatic, nonaromatic), (aromatic, partially aromatic), (antiaromatic, nonaromatic), and (nonaromatic, nonaromatic), with their energy difference representing aromatization energy (Earoma). Using reliable density functional theory, Earoma is assessed for various aromatic and antiaromatic ring motifs, including borderline cases and nonaromatic structures. For example, benzene exhibits an Earoma of 23.4 kcal/mol, indicating 3.9 kcal/mol aromatic stabilization per CC bond, while cyclobutadiene shows -29.9 kcal/mol, indicating a 7.5 kcal/mol destabilization of the CC bond. This approach extends to evaluating global and local aromatic stabilization effects in polycyclic hydrocarbons, nonbenzenoid systems, and heterocyclic compounds. Additionally, variation in 1H NMR chemical shift (δavg) correlates with Earoma, suggesting that a -1.0 ppm shift corresponds to 24.2 kcal/mol aromatization energy. UV-vis absorption maxima difference (Δλavg) correlates linearly with Earoma, enabling direct assessment of aromatization energy from UV-vis spectra using suitable homodesmotic pairs. This comprehensive approach enhances our understanding of structural, energetic, and spectroscopic aspects of aromatic and antiaromatic systems.
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Affiliation(s)
- Puthiyavalappil K Arathi
- Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram 695019, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Cherumuttathu H Suresh
- Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram 695019, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
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3
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Single crystal investigation, spectroscopic, DFT studies, and in-silico molecular docking of the anticancer activities of acetylacetone coordinated Re(I) tricarbonyl complexes. Inorganica Chim Acta 2023. [DOI: 10.1016/j.ica.2022.121335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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4
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Wei W, Zhao ZX, Xia BH, Li W. Theoretical analysis of expanded porphyrins: Aromaticity, stability, and optoelectronic properties. Front Chem 2022; 10:948632. [PMID: 36118314 PMCID: PMC9476321 DOI: 10.3389/fchem.2022.948632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 07/26/2022] [Indexed: 11/13/2022] Open
Abstract
Expanded porphyrin systems are capable of binding a variety of substrates due to their increased cavity size and aromatic nature, holding important applications as magnetic resonance imaging contrast agents and as sensitizers for photodynamic therapy. It is there of fundamental interest to know the photoelectrical properties of expanded porphyrins using quantum chemistry calculations. In this work, we theoretically designed and screened a series of expanded porphyrins by incorporating terthiophene (TTH) and dithienothiophene (DTT) moieties. Our calculations showed that all the designed molecules exhibit excellent optoelectronic performance than the reference molecule. It is suggested that the porphyrin molecule with TTH moiety has better stability than the one with DTT moiety. Finally, we demonstrated that molecule 2 features with TTH moiety and the inverted selenophene ring outperform other molecules because it exhibits increased HOMO-LUMO gap, planar geometry, and strengthened aromaticity. We expect that this work can provide theoretical guidelines for the design of novel porphyrin materials.
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Affiliation(s)
- Wei Wei
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, Changchun, China
- *Correspondence: Wei Wei, ; Wei Li,
| | - Zeng-Xia Zhao
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, Changchun, China
| | - Bao-Hui Xia
- College of Chemistry, Jilin University, Changchun, China
| | - Wei Li
- School of Chemistry and Materials Science, Hunan Agricultural University, Changsha, China
- *Correspondence: Wei Wei, ; Wei Li,
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Deljuie F, Rouhani M, Saeidian H. Exceptional design of super/hyperbases based on spiro‐alleneic structures in gas phase: A DFT study. J PHYS ORG CHEM 2022. [DOI: 10.1002/poc.4423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Fatemeh Deljuie
- Department of Chemistry, Science and Research Branch Islamic Azad University Tehran Iran
| | - Morteza Rouhani
- Department of Chemistry, Science and Research Branch Islamic Azad University Tehran Iran
| | - Hamid Saeidian
- Department of Science Payame Noor University (PNU) Tehran Iran
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Density functional theoretical study, spectroscopic characterization and molecular docking of the diuretic drug, spironolactone, adsorbed on AuNPs surface and in-vitro studies based on anticancer activity studies against A549 lung cancer cell line. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.128255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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7
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Abstract
Aromaticity, a very important term in organic chemistry, has never been defined unambiguously. Various ways to describe it come from different phenomena that have been experimentally observed. The most important examples related to some theoretical concepts are presented here.
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Suresh CH, Remya GS, Anjalikrishna PK. Molecular electrostatic potential analysis: A powerful tool to interpret and predict chemical reactivity. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2022. [DOI: 10.1002/wcms.1601] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Cherumuttathu H. Suresh
- Chemical Sciences and Technology Division CSIR‐National Institute for Interdisciplinary Science and Technology Thiruvananthapuram Kerala India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad India
| | - Geetha S. Remya
- Chemical Sciences and Technology Division CSIR‐National Institute for Interdisciplinary Science and Technology Thiruvananthapuram Kerala India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad India
| | - Puthannur K. Anjalikrishna
- Chemical Sciences and Technology Division CSIR‐National Institute for Interdisciplinary Science and Technology Thiruvananthapuram Kerala India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad India
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9
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Pongpanit T, Saeteaw T, Chumsaeng P, Chasing P, Phomphrai K. Highly Active Homoleptic Zinc and Magnesium Complexes Supported by Constrained Reduced Schiff Base Ligands for the Ring-Opening Polymerization of Lactide. Inorg Chem 2021; 60:17114-17122. [PMID: 34605644 DOI: 10.1021/acs.inorgchem.1c02382] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
New homoleptic zinc and magnesium complexes containing constrained reduced Schiff base ligands based on substituted 7-hydroxy-1-indanone were successfully synthesized and used as a catalyst for the polymerization of lactide. The ligands contain a side arm having different basicity because dimethylamino, pyridyl, and furfuryl groups are shown to greatly affect the polymerization rates. The homoleptic zinc complex containing constrained reduced Schiff base ligands and a dimethylamino side arm was highly active, giving a 92% conversion of l-lactide in 3 min using [LA]:[Zn]:[BnOH] = 500:1:2 at room temperature. The polymerization is pseudo-first-order dependent on the LA concentration. Well-controlled and living behavior of the zinc complex was observed and demonstrated in the preparation of stereodiblock and triblock copolymers of l-, d-, and rac-lactide in a one-pot sequential synthesis with a predictable block length, block sequence, and narrow dispersity rapidly in 10 min. Stereocomplex formation was observed for PLA made sequentially from 100 l-LA, 100 rac-LA, and 100 d-LA having a high Tm of up to 220 °C.
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Affiliation(s)
- Tanyawan Pongpanit
- Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology, Wangchan, Rayong 21210, Thailand
| | - Thonthun Saeteaw
- Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology, Wangchan, Rayong 21210, Thailand
| | - Phongnarin Chumsaeng
- Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology, Wangchan, Rayong 21210, Thailand
| | - Pongsakorn Chasing
- Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology, Wangchan, Rayong 21210, Thailand
| | - Khamphee Phomphrai
- Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology, Wangchan, Rayong 21210, Thailand
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Divya VV, Suresh CH. Design and DFT study of nitrogen-rich donor systems for improved photovoltaic performance in dye-sensitized solar cells. NEW J CHEM 2021. [DOI: 10.1039/d1nj00881a] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Donor modifications, especially through N-annulation, for enhancing the structure–performance relationship of D–π–A systems for DSSC applications.
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Affiliation(s)
- Velayudhan V. Divya
- Chemical Sciences and Technology Division
- CSIR-National Institute for Interdisciplinary Science and Technology
- Thiruvananthapuram
- India
- Academy of Scientific and Innovative Research (AcSIR)
| | - Cherumuttathu H. Suresh
- Chemical Sciences and Technology Division
- CSIR-National Institute for Interdisciplinary Science and Technology
- Thiruvananthapuram
- India
- Academy of Scientific and Innovative Research (AcSIR)
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Wei W, Ren W, Jian W, Xia B, Zhang H, Bai FQ, Li W. Stability, Aromaticity, and Photophysical Behaviors of Macrocyclic Molecules: A Theoretical Analysis. Front Chem 2020; 8:776. [PMID: 33102432 PMCID: PMC7500243 DOI: 10.3389/fchem.2020.00776] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 07/24/2020] [Indexed: 12/03/2022] Open
Abstract
The macrocyclic molecules with terthiophene (TTH) isomers unit exhibit intriguing properties in terms of aromaticity, stability, and absorption. In this work, we theoretically designed a series of macrocyclic molecules featured with TTH and dithienothiophene (DTT) π-conjugated building units, which are used to permute pyrrole unit in porphyrin skeleton. Density functional theory and time-dependent DFT methods are used to evaluate the performance of the designed molecules. Our simulations show that molecules 1–3 exhibit excellent optoelectronic performance. Specifically, the molecule with the DTT unit is more stable than the one with TTH unit in terms of aromaticity and aromatic stabilization energy. This is because DTT unit enhances the coplanarity of the molecular material, facilitating electronic communication. Calculation of vertical electronic excitations suggests the absorption feature of these molecules is mainly contributed by the electronic excitations of higher occupied molecular orbital (HOMO) → lowest unoccupied molecular orbital (LUMO)+1 and HOMO-1 → LUMO. Judging from the key parameters determining the overall performance, 3 stands out because of its good planarity, large HOMO–LUMO gap, and strong aromaticity among all molecules. Interestingly, molecule 1 has the current density flow distributes around the outer section of TTH unit; in contrast, molecule 3 with DTT unit has the current density flow located at the inner section of DTT, which is beneficial for stability and aromaticity. Second-order perturbation energies are calculated to rationalize this observation. We expect that these research results can provide valuable insights into the rational design of novel molecular materials for a variety of applications.
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Affiliation(s)
- Wei Wei
- Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, China
| | - Wenhui Ren
- School of Chemistry and Materials Science, Hunan Agricultural University, Changsha, China
| | - Wei Jian
- Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, China
| | - Baohui Xia
- College of Chemistry, Jilin University, Changchun, China
| | - Hongxing Zhang
- Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, China
| | - Fu-Quan Bai
- Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, China
| | - Wei Li
- School of Chemistry and Materials Science, Hunan Agricultural University, Changsha, China
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12
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Wei W, Li W, Xia BH, Zhang HX, Bai FQ. Theoretical investigations of the aromaticity, stability and photophysical behaviors for expanded porphyrins. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.04.067] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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13
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Yu D, Stuyver T, Rong C, Alonso M, Lu T, De Proft F, Geerlings P, Liu S. Global and local aromaticity of acenes from the information-theoretic approach in density functional reactivity theory. Phys Chem Chem Phys 2019; 21:18195-18210. [PMID: 31389933 DOI: 10.1039/c9cp01623f] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
In this work, we report a systematic study on the global and local aromaticity of acenes using a series of model structures from 2-acene to 11-acene. A recently developed ansatz, an information-theoretic approach coached into density functional reactivity theory has been employed, which essentially provides different density functionals characterizing the molecular electron density distribution. Based on the correlation analysis of six conventional aromaticity indices with eight information-theoretic quantities, we examined the aromaticity of acenes from both global and local perspectives. From the global aromaticity viewpoint, our results suggest that different descriptors based on various physicochemical properties are intrinsically dependent. A novel laminated feature ruling local aromaticity of acenes has been unveiled, from which we found that the distance from the terminal rings plays the critical role. Based on the shape of the correlation plots between the conventional aromaticity indices and information-theoretic quantities, the latter could be separated into three subgroups. The seemingly contradictory results from global and local aromaticity perspectives not only present us the uniqueness of the acene systems but all demonstrate the effectiveness of the information-theoretic approach from density functional reactivity theory. Besides strengthening the validity of a series of new aromaticity descriptors, our results should lead to more clear insights into the chemical significance of the information-theoretic quantities.
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Affiliation(s)
- Donghai Yu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, 410081, China.
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14
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Pinheiro M, Das A, Aquino AJA, Lischka H, Machado FBC. Interplay between Aromaticity and Radicaloid Character in Nitrogen-Doped Oligoacenes Revealed by High-Level Multireference Methods. J Phys Chem A 2018; 122:9464-9473. [PMID: 30427678 DOI: 10.1021/acs.jpca.8b09046] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Aromaticity is a multivariable concept in organic chemistry that plays a central role for understanding the structure, stability, and reactivity of polycyclic aromatic hydrocarbons (PAHs). Several types of PAHs are characterized as singlet biradicaloid species and their chemical stability is intimately linked to the degree of aromatic character. In this study, theoretically designed routes to tune the biradical character (and thereby its chemical stability) of nitrogen-substituted octacenes have been investigated on the basis of the high-level multireference averaged quadratic coupled-cluster MR-AQCC method necessary for the appropriate description of polyradicaloid systems. The influence of nitrogen centers on the aromaticity of octacene is probed through structural (HOMA) and electron localization (ELF) indices by comparing the N- against NH-doping cases. These analyses reveal that the aromaticity and biradical character of octacene is only slightly affected by replacing one pair of CH groups with N atoms, i.e., by N-doping. However, a significant aromatic stabilization can be obtained when NH-doping is applied at the inner octacene rings; this is also accompanied by an overall decrease of the open-shell character, as evidenced by the gradual quenching of the unpaired electrons and increase in the singlet-triplet splittings when the NH doping groups are moved toward the center of the octacene molecule. Our findings aid in the rational design of new PAH compounds with balanced biradicaloid character and chemical stability which is important, e.g., for practical applications in organic solar cells based on the singlet-fission mechanism.
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Affiliation(s)
- Max Pinheiro
- Departamento de Química , Instituto Tecnológico de Aeronáutica , São José dos Campos , 12228-900 São Paulo , Brazil
| | - Anita Das
- School of Pharmaceutical Sciences and Technology , Tianjin University , Tianjin 300072 , P.R. China
| | - Adelia J A Aquino
- School of Pharmaceutical Sciences and Technology , Tianjin University , Tianjin 300072 , P.R. China.,Institute for Soil Research , University of Natural Resources and Life Sciences Vienna , Peter-Jordan-Strasse 82 , A-1190 Vienna , Austria.,Department of Chemistry and Biochemistry , Texas Tech University , Lubbock , Texas 79409-1061 , United States
| | - Hans Lischka
- School of Pharmaceutical Sciences and Technology , Tianjin University , Tianjin 300072 , P.R. China.,Department of Chemistry and Biochemistry , Texas Tech University , Lubbock , Texas 79409-1061 , United States.,Institute for Theoretical Chemistry , University of Vienna , A-1090 Vienna , Austria
| | - Francisco B C Machado
- Departamento de Química , Instituto Tecnológico de Aeronáutica , São José dos Campos , 12228-900 São Paulo , Brazil
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15
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Straightforward Design for Phenoxy-Imine Catalytic Activity in Ethylene Polymerization: Theoretical Prediction. Catalysts 2018. [DOI: 10.3390/catal8100422] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
The quantitative structure-activity relationship (QSAR) of 18 Ti-phenoxy-imine (FI-Ti)-based catalysts was investigated to clarify the role of the structural properties of the catalysts in polyethylene polymerization activity. The electronic properties of the FI-Ti catalysts were analyzed based on density functional theory with the M06L/6-31G** and LANL2DZ basis functions. The analysis results of the QSAR equation with a genetic algorithm showed that the polyethylene catalytic activity mainly depended on the highest occupied molecular orbital energy level and the total charge of the substituent group on phenylimine ring. The QSAR models showed good predictive ability (R2) and R2 cross validation (R2cv) values of greater than 0.927. The design concept is “head-hat”, where the hats are the phenoxy-imine substituents, and the heads are the transition metals. Thus, for the newly designed series, the phenoxy-imine substituents still remained, while the Ti metal was replaced by Zr or Ni transition metals, entitled FI-Zr and FI-Ni, respectively. Consequently, their polyethylene polymerization activities were predicted based on the obtained QSAR of the FI-Ti models, and it is noteworthy that the FI-Ni metallocene catalysts tend to increase the polyethylene catalytic activity more than that of FI-Zr complexes. Therefore, the new designs of the FI-Ni series are proposed as candidate catalysts for polyethylene polymerization, with their predicted activities in the range of 35,000–48,000 kg(PE)/mol(Cat.)·MPa·h. This combined density functional theory and QSAR analysis is useful and straightforward for molecular design or catalyst screening, especially in industrial research.
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Messelberger J, Grünwald A, Pinter P, Hansmann MM, Munz D. Carbene derived diradicaloids - building blocks for singlet fission? Chem Sci 2018; 9:6107-6117. [PMID: 30090299 PMCID: PMC6053972 DOI: 10.1039/c8sc01999a] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2018] [Accepted: 06/25/2018] [Indexed: 12/13/2022] Open
Abstract
Organic singlet diradicaloids promise application in non-linear optics, electronic devices and singlet fission. The stabilization of carbon allotropes/cumulenes (C1, C2, C4) by carbenes has been equally an area of high activity. Combining these fields, we showed recently that carbene scaffolds allow as well for the design of diradicaloids. Herein, we report a comprehensive computational investigation (CASSCF/NEVPT2; fractional occupation DFT) on the electronic properties of carbene-bridge-carbene type diradicaloids. We delineate how to adjust the properties of these ensembles through the choice of carbene and bridge and show that already a short C2 bridge results in remarkable diradicaloid character. The choice of the carbene separately tunes the energies of the S1 and T1 excited states, whereas the bridge adjusts the overall energy level of the excited states. Accordingly, we develop guidelines on how to tailor the electronic properties of these molecules. Of particular note, fractional occupation DFT is an excellent tool to predict singlet-triplet gaps.
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Affiliation(s)
- Julian Messelberger
- Friedrich-Alexander Universität Erlangen-Nürnberg , Anorganische und Allgemeine Chemie , Egerlandstr. 1 , 91058 Erlangen , Germany .
| | - Annette Grünwald
- Friedrich-Alexander Universität Erlangen-Nürnberg , Anorganische und Allgemeine Chemie , Egerlandstr. 1 , 91058 Erlangen , Germany .
| | - Piermaria Pinter
- Technische Universität Dresden, Physikalische Organische Chemie , Bergstr. 66 , 01069 Dresden , Germany
| | - Max M Hansmann
- Georg-August Universität Göttingen , Institut für Organische und Biomolekulare Chemie , Tammannstraße 2 , 37073 Göttingen , Germany
| | - Dominik Munz
- Friedrich-Alexander Universität Erlangen-Nürnberg , Anorganische und Allgemeine Chemie , Egerlandstr. 1 , 91058 Erlangen , Germany .
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Cecily Mary Glory D, Sambathkumar K, Madivanane R, Velmurugan G, Gayathri R, Nithiyanantham S, Venkatachalapathy M, Rajkamal N. Optical, Fluorescence with quantum analysis of hydrazine (1, 3- Dinitro Phenyl) by DFT and Ab initio approach. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.12.046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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18
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Theoretical investigation of the use of nanocages with an adsorbed halogen atom as anode materials in metal-ion batteries. J Mol Model 2018; 24:64. [PMID: 29468439 DOI: 10.1007/s00894-018-3604-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2017] [Accepted: 01/30/2018] [Indexed: 01/29/2023]
Abstract
The applicability of C44, B22N22, Ge44, and Al22P22 nanocages, as well as variants of those nanocages with an adsorbed halogen atom, as high-performance anode materials in Li-ion, Na-ion, and K-ion batteries was investigated theoretically via density functional theory. The results obtained indicate that, among the nanocages with no adsorbed halogen atom, Al22P22 would be the best candidate for a novel anode material for use in metal-ion batteries. Calculations also suggest that K-ion batteries which utilize these nanocages as anode materials would give better performance and would yield higher cell voltages than the corresponding Li-ion and Na-ion batteries with nanocage-based anodes. Also, the results for the nanocages with an adsorbed halogen atom imply that employing them as anode materials would lead to higher cell voltages and better metal-ion battery performance than if the nanocages with no adsorbed halogen atom were to be used as anode materials instead. Results further implied that nanocages with an adsorbed F atom would give higher cell voltages and better battery performance than nanocages with an adsorbed Cl or Br atom. We were ultimately able to conclude that a K-ion battery that utilized Al21P22 with an adsorbed F atom as its anode material would afford the best metal-ion battery performance; we therefore propose this as a novel highly efficient metal-ion battery. Graphical abstract The results of a theoretical investigation indicated that Al22P22 is a better candidate for a high-performance anode material in metal-ion batteries than Ge44 is. Calculations also showed that K-ion batteries with nanocage-based anodes would produce higher cell voltages and perform better than the equivalent Li-ion and Na-ion batteries with nanocage-based anodes, and that anodes based on nanocages with an adsorbed F atom would perform better than anodes based on nanocages with an adsorbed Cl or Br atom.
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Computational Exploration for Lead Compounds That Can Reverse the Nuclear Morphology in Progeria. BIOMED RESEARCH INTERNATIONAL 2017; 2017:5270940. [PMID: 29226142 PMCID: PMC5684607 DOI: 10.1155/2017/5270940] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Accepted: 09/24/2017] [Indexed: 01/01/2023]
Abstract
Progeria is a rare genetic disorder characterized by premature aging that eventually leads to death and is noticed globally. Despite alarming conditions, this disease lacks effective medications; however, the farnesyltransferase inhibitors (FTIs) are a hope in the dark. Therefore, the objective of the present article is to identify new compounds from the databases employing pharmacophore based virtual screening. Utilizing nine training set compounds along with lonafarnib, a common feature pharmacophore was constructed consisting of four features. The validated Hypo1 was subsequently allowed to screen Maybridge, Chembridge, and Asinex databases to retrieve the novel lead candidates, which were then subjected to Lipinski's rule of 5 and ADMET for drug-like assessment. The obtained 3,372 compounds were forwarded to docking simulations and were manually examined for the key interactions with the crucial residues. Two compounds that have demonstrated a higher dock score than the reference compounds and showed interactions with the crucial residues were subjected to MD simulations and binding free energy calculations to assess the stability of docked conformation and to investigate the binding interactions in detail. Furthermore, this study suggests that the Hits may be more effective against progeria and further the DFT studies were executed to understand their orbital energies.
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Rakhi R, Suresh CH. A DFT study on 1,4-dihydro-1,4-azaborinine annulated linear polyacenes: Absorption spectra, singlet-triplet energy gap, aromaticity, and HOMO-LUMO energy modulation. J Comput Chem 2017; 38:2232-2240. [PMID: 28786164 DOI: 10.1002/jcc.24868] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Revised: 05/31/2017] [Accepted: 06/08/2017] [Indexed: 11/06/2022]
Abstract
Linear polyacene (LPA) mimics containing multiple heterocycles have been computationally designed by annulating 1,4-dihydro-1,4-azaborinine moieties to benzene (aB1 -aB5 ), naphthalene (aN1 -aN5 ), anthracene (aA1 -aA5 ), and tetracene (aT1 -aT5 ) cores. DFT studies conducted on them using M06L/6-311++G(d,p) method reveal a perfect planar structure for all and suggest the utilization of nitrogen lone pairs for aromatic π-electron delocalization. The computed values of aromaticity indices such as HOMA, NICS, and dehydrogenation energy (Edh ) of heterocycles support strong aromatic character for each six-membered ring in the LPA mimics. On the basis of the minimum value of the molecular electrostatic potential (Vmin ) observed on each LPA unit in the LPA mimics, the extended delocalization of π-electrons is verified. The energetic parameter Edh showed strong linear correlation with HOMA, NICS and Vmin parameters, which strongly supports the multidimensional character of aromaticity in LPA mimics. The electronic property modification is shown by the theoretical absorption spectra data and singlet-triplet energy gap (ΔEST ). The bandgap and ΔEST tunings are achieved for LPA mimics by selecting appropriate number of azaborinine type units and the size of LPA core used for annulation. © 2017 Wiley Periodicals, Inc.
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Affiliation(s)
- Ramachandran Rakhi
- Chemical Sciences and Technology Division, Academy of Scientific and Innovative Research (AcSIR), CSIR-National Institute for Interdisciplinary Science and Technology (CSIR-NIIST), Thiruvananthapuram, 695019, India
| | - Cherumuttathu H Suresh
- Chemical Sciences and Technology Division, Academy of Scientific and Innovative Research (AcSIR), CSIR-National Institute for Interdisciplinary Science and Technology (CSIR-NIIST), Thiruvananthapuram, 695019, India
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Vijayalakshmi KP, Suresh CH. Ammonia Borane Clusters: Energetics of Dihydrogen Bonding, Cooperativity, and the Role of Electrostatics. J Phys Chem A 2017; 121:2704-2714. [DOI: 10.1021/acs.jpca.7b01527] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kunduchi P. Vijayalakshmi
- Analytical and Spectroscopy
Division, Analytical, Spectroscopy and Ceramics Group, Propellants,
Polymers, Chemicals and Materials Entity, Vikram Sarabhai Space Centre, Thiruvananthapuram- 695022, India
| | - Cherumuttathu H. Suresh
- Chemical Sciences and Technology Division, CSIR- National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695 019, India
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Pinheiro M, Ferrão LFA, Bettanin F, Aquino AJA, Machado FBC, Lischka H. How to efficiently tune the biradicaloid nature of acenes by chemical doping with boron and nitrogen. Phys Chem Chem Phys 2017; 19:19225-19233. [DOI: 10.1039/c7cp03198j] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Strong modulation of the biradical character of acenes with dopant positions is demonstrated by tracking the unpaired electron densities.
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Affiliation(s)
- Max Pinheiro
- Departamento de Química
- Instituto Tecnológico de Aeronáutica
- São José dos Campos
- São Paulo
- Brazil
| | - Luiz F. A. Ferrão
- Departamento de Química
- Instituto Tecnológico de Aeronáutica
- São José dos Campos
- São Paulo
- Brazil
| | - Fernanda Bettanin
- Departamento de Química
- Instituto Tecnológico de Aeronáutica
- São José dos Campos
- São Paulo
- Brazil
| | - Adélia J. A. Aquino
- School of Pharmaceutical Sciences and Technology
- Tianjin University
- Tianjin
- P. R. China
- Department of Chemistry and Biochemistry
| | - Francisco B. C. Machado
- Departamento de Química
- Instituto Tecnológico de Aeronáutica
- São José dos Campos
- São Paulo
- Brazil
| | - Hans Lischka
- School of Pharmaceutical Sciences and Technology
- Tianjin University
- Tianjin
- P. R. China
- Department of Chemistry and Biochemistry
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