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Meyer P, Jäger S, Khatri J, Henkel S, Schwaab G, Havenith M. Mixed H 2S and H 2O Clusters─New Insights into Dispersion-Dominated Hydrogen Bonding. J Phys Chem A 2024; 128:9627-9633. [PMID: 39446033 DOI: 10.1021/acs.jpca.4c05510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2024]
Abstract
Here, we report the results of an IR spectroscopy study on heteroclusters of H2S and H2O and several of their isotopomers using mass-selective IR spectroscopy in superfluid helium nanodroplets in the range of 2560-2800 cm-1. Based on DFT calculations on the B3LYP-D3/6-311++G(d,p) level of theory, we were able to assign the experimentally observed O-D stretching bands to heterodimer and heterotrimer clusters. Since no bands of the S-H-bound conformer HSH···OH2 could be observed, we were able to determine the O-H-bound conformer HOH···SH2 to be the global minimum structure. A trapping of the local minima in helium nanodroplets was not observed. This is in line with the weaker hydrogen bond expected for H2S complexes. In these clusters, the interaction energy is expected to be more dominated by dispersion and less dictated by highly directional electrostatic forces.
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Affiliation(s)
- Philipp Meyer
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
| | - Svenja Jäger
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
| | - Jai Khatri
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
| | - Stefan Henkel
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
| | - Gerhard Schwaab
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
| | - Martina Havenith
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany
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2
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Choi J, Zabihi O, Varley RJ, Fox B, Naebe M. High Performance Carbon Fiber Structural Batteries Using Cellulose Nanocrystal Reinforced Polymer Electrolyte. ACS APPLIED MATERIALS & INTERFACES 2022; 14:45320-45332. [PMID: 36178739 DOI: 10.1021/acsami.2c11034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
In recent years, structural batteries have received great attention for future automotive application in which a load-bearing car panel is used as an energy storage. However, based on the current advances, achieving both high ionic conductivity and mechanical performance has remained a challenge. To address this challenge, this study introduces a cellulose nanocrystal (CNC) reinforced structural battery electrolyte (CSBE) consisting of CNC, triethylene glycol dimethyl ether (TriG) electrolyte containing a quasi-solid additive, e.g., cyclohexanedimethanol (CHDM), in a vinyl ester polymer. This green and renewable CSBE electrolyte system was in situ polymerized via reaction induced phase transition to form a high performance multidimensional channel electrolyte to be used in structural carbon fiber-based battery fabrication. The effect of various concentrations of CNC on the electrolyte ionic conductivity and mechanical properties was obtained in their relation to intermolecular interactions, interpreted by FTIR, Raman, Li NMR results. Compared to the neat SBE system, the optimized CSBE nanocomposite containing 2 wt % CNC shows a remarkable ionic conductivity of 1.1 × 10-3 S cm-1 at 30 °C, which reveals ∼300% improvement, alongside higher thermal stability. Based on the FTIR, Raman, Li NMR results, the content of CNC in the CSBE structure plays a crucial role not only in the formation of cellulose network skeleton but also in physical interaction with polymer matrix, providing an efficient Li+ pathway through the electrolyte matrix. The carbon fiber composite was fabricated by 2 wt % CNC reinforced SBE electrolyte to evaluate as a battery half-cell. The results demonstrated that by addition of 2 wt % CNC into SBE system, 7.6% and 33.9% improvements were achieved in specific capacity at 0.33 C and tensile strength, respectively, implying outstanding potential of ion conduction and mechanical load transfer between the carbon fibers and the electrolyte.
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Affiliation(s)
- Jaehoon Choi
- Carbon Nexus, Institute for Frontier Materials (IFM), Deakin University, Waurn Ponds, Victoria3216, Australia
| | - Omid Zabihi
- Carbon Nexus, Institute for Frontier Materials (IFM), Deakin University, Waurn Ponds, Victoria3216, Australia
| | - Russell J Varley
- Carbon Nexus, Institute for Frontier Materials (IFM), Deakin University, Waurn Ponds, Victoria3216, Australia
| | - Bronwyn Fox
- Faculty of Science, Engineering and Technology, Swinburne University of Technology, Hawthorn, Victoria3122, Australia
| | - Minoo Naebe
- Carbon Nexus, Institute for Frontier Materials (IFM), Deakin University, Waurn Ponds, Victoria3216, Australia
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3
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Mechanically reinforced biodegradable starch-based polyester with the specific Poly(ethylene ether carbonate). POLYMER 2021. [DOI: 10.1016/j.polymer.2021.123512] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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4
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Zuo C, Zhao X, Wang H, Ma X, Zheng S, Xu F, Zhang Q. A theoretical study of hydrogen-bonded molecular clusters of sulfuric acid and organic acids with amides. J Environ Sci (China) 2021; 100:328-339. [PMID: 33279046 DOI: 10.1016/j.jes.2020.07.022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Revised: 02/11/2020] [Accepted: 07/25/2020] [Indexed: 06/12/2023]
Abstract
Amides, a series of significant atmospheric nitrogen-containing volatile organic compounds (VOCs), can participate in new particle formation (NPF) throught interacting with sulfuric acid (SA) and organic acids. In this study, we investigated the molecular interactions of formamide (FA), acetamide (AA), N-methylformamide (MF), propanamide (PA), N-methylacetamide (MA), and N,N-dimethylformamide (DMF) with SA, acetic acid (HAC), propanoic acid (PAC), oxalic acid (OA), and malonic acid (MOA). Global minimum of clusters were obtained through the association of the artificial bee colony (ABC) algorithm and density functional theory (DFT) calculations. The conformational analysis, thermochemical analysis, frequency analysis, and topological analysis were conducted to determine the interactions of hydrogen-bonded molecular clusters. The heterodimers formed a hepta or octa membered ring through four different types of hydrogen bonds, and the strength of the bonds are ranked in the following order: SOH•••O > COH•••O > NH•••O > CH•••O. We also evaluated the stability of the clusters and found that the stabilization effect of amides with SA is weaker than that of amines with SA but stronger than that of ammonia (NH3) with SA in the dimer formation of nucleation process. Additionally, the nucleation capacity of SA with amides is greater than that of organic acids with amides.
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Affiliation(s)
- Chenpeng Zuo
- Shenzhen Research Institute, Shandong University, Shenzhen 518057, China; Environment Research Institute, Shandong University, Qingdao 266237, China
| | - Xianwei Zhao
- Environment Research Institute, Shandong University, Qingdao 266237, China
| | - Hetong Wang
- Environment Research Institute, Shandong University, Qingdao 266237, China
| | - Xiaohui Ma
- Environment Research Institute, Shandong University, Qingdao 266237, China
| | - Siyuan Zheng
- Environment Research Institute, Shandong University, Qingdao 266237, China
| | - Fei Xu
- Shenzhen Research Institute, Shandong University, Shenzhen 518057, China; Environment Research Institute, Shandong University, Qingdao 266237, China.
| | - Qingzhu Zhang
- Environment Research Institute, Shandong University, Qingdao 266237, China
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5
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Halogen bonds and other noncovalent interactions in the crystal structures of trans-1,2-diiodo alkenes: an ab initio and QTAIM study. J Mol Model 2020; 26:331. [PMID: 33150494 DOI: 10.1007/s00894-020-04591-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Accepted: 10/27/2020] [Indexed: 10/23/2022]
Abstract
A series of interatomic interactions interpretable as halogen bonds involving I…I, I…O, and I…C(π), as well as the noncovalent interactions I…H and O…O, were observed in the crystal structures of trans-1,2-diiodoolefins dimers according to ab initio calculations and the quantum theory of "atoms in molecules" (QTAIM) method. The interplay between each type of halogen bond and other noncovalent interactions was studied systematically in terms of bond length, electrostatic potential, and interaction energy, which are calculated via ab initio methods at the B3LYP-D3/6-311++G(d,p) and B3LYP-D3/def2-TZVP levels of theory. Characteristics and nature of the halogen bonds and other noncovalent interactions, including the topological properties of the electron density, the charge transfer, and their strengthening or weakening, were analyzed by means of both QTAIM and "natural bond order" (NBO). These computational methods provide additional insight into observed intermolecular interactions and are utilized to explain the differences seen in the crystal structures. Graphical abstract The contour map presents the regions of electronic concentration and depletion along each bond in one dimer. The blue points denote the BCPs. The blue lines denote positive Laplacian of electron density, which indicate the ionic interactions, van der Waals or intermolecular interactions, and the red lines denote negative Laplacian of electron density which indicate the covalent bonds.
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6
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Su P, Tang Z, Wu W. Generalized Kohn‐Sham energy decomposition analysis and its applications. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2020. [DOI: 10.1002/wcms.1460] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Peifeng Su
- The State Key Laboratory of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering Xiamen University Xiamen China
| | - Zhen Tang
- The State Key Laboratory of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering Xiamen University Xiamen China
| | - Wei Wu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering Xiamen University Xiamen China
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7
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Tang S, Du L. Effects of methylation in acceptors on the hydrogen bond complexes between 2,2,2-trifluoroethanol and cyclic ethers. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2019; 217:237-246. [PMID: 30947132 DOI: 10.1016/j.saa.2019.03.088] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Revised: 03/24/2019] [Accepted: 03/25/2019] [Indexed: 05/15/2023]
Abstract
In order to explore the effect of methylation on the stability and spectral shift of hydrogen bond complexes, the complexes of 2,2,2-trifluoroethanol (TFE) with propylene oxide (PO) and isobutylene oxide (IBO) were investigated by Fourier transform infrared (FTIR) spectroscopy and ab initio computations. The comparable OH-stretching red shifts were observed upon complexation, and an enhancement of the OH-stretching band is shown with the partial pressure of monomers increasing. The OH-stretching frequency of TFE is red shifted by 180 and 201 cm-1 with PO and IBO, respectively. By using quantum chemical calculations, we predicted the geometric parameters, binding energies, and spectral shifts of TFEPO/IBO hydrogen bond complexes. The calculated and observed spectral shifts follow the same trends. Compared with the TFEethylene oxide (EO) complex, the strength of the hydrogen bond in complex increases with the addition of methyl group, which likely results from the increase in basicity of the hydrogen bond acceptor. By combining the experimental integrated absorbance and the calculated IR intensity of the OH-stretching vibrational transition, the equilibrium constant for the complex formation was determined. In addition, atoms-in-molecules (AIM) and natural bond orbital (NBO) analyses were carried out to explain the red shift and the nature of the interaction in these complexes.
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Affiliation(s)
- Shanshan Tang
- Environment Research Institute, Shandong University, Binhai Road 72, Qingdao 266237, China
| | - Lin Du
- Environment Research Institute, Shandong University, Binhai Road 72, Qingdao 266237, China.
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8
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Dreux KM, Tschumper GS. Examination of the structures, energetics, and vibrational frequencies of small sulfur‐containing prototypical dimers, (H
2
S)
2
and H
2
O/H
2
S. J Comput Chem 2018; 40:229-236. [DOI: 10.1002/jcc.25578] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2018] [Revised: 08/13/2018] [Accepted: 08/13/2018] [Indexed: 11/08/2022]
Affiliation(s)
- Katelyn M. Dreux
- Department of Chemistry and Biochemistry University of Mississippi University Mississippi, 38677‐1848
| | - Gregory S. Tschumper
- Department of Chemistry and Biochemistry University of Mississippi University Mississippi, 38677‐1848
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9
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Mazmanian K, Dudev T, Lim C. How First Shell–Second Shell Interactions and Metal Substitution Modulate Protein Function. Inorg Chem 2018; 57:14052-14061. [DOI: 10.1021/acs.inorgchem.8b01029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Karine Mazmanian
- Institute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan
- Chemical Biology and Molecular Biophysics Program, Taiwan International Graduate Program, Academia Sinica, Taipei 10617, Taiwan
- Taiwan and Institute of Biochemical Sciences, National Taiwan University, Taipei 10617, Taiwan
| | - Todor Dudev
- Faculty of Chemistry and Pharmacy, Sofia University, Sofia 1164, Bulgaria
| | - Carmay Lim
- Institute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan
- Department of Chemistry, National Tsing Hua University, Hsinchu 300, Taiwan
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10
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Sheng X, Jiang X, Zhao H, Wan D, Liu Y, Ngwenya CA, Du L. FTIR study of hydrogen bonding interaction between fluorinated alcohol and unsaturated esters. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 198:239-247. [PMID: 29549865 DOI: 10.1016/j.saa.2018.03.019] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Revised: 02/25/2018] [Accepted: 03/08/2018] [Indexed: 06/08/2023]
Abstract
The 1:1 complexes of two unsaturated esters with 2,2,2-trifluoroethanol (TFE) were investigated experimentally and computationally. The experimental observations of the spectral shifts of the OH-stretching vibrational transitions were obtained at 113cm-1 for TFE-methyl acrylate (MA) and 92cm-1 for TFE-vinyl acetate (VA). There are three docking sites in the two unsaturated esters for the incoming TFE. The predicted red shifts of the OH-stretching vibrational transitions were found to be larger for the OH⋯OC hydrogen bonded conformer than those for the OH⋯π and OH⋯O ones. The binding energies further prove that the OH⋯OC hydrogen bonded conformers are the most stable ones. On the basis of the DFT calculations as well as previous works, the carbonyl group is the best docking site for TFE. Furthermore, the thermodynamic equilibrium constants of TFE-MA and TFE-VA were obtained at 0.28 and 0.15 by combining the experimental spectra data and the DFT calculations. Consequently, the Gibbs free energies of formation were determined to be 3.2 and 4.8kJmol-1 for TFE-MA and TFE-VA, respectively. The quantum theory of atoms in molecules (AIM) and generalized Kohn-Sham energy decomposition analysis (GKS-EDA) were carried out for further characterization of the hydrogen bonding interactions. GKS-EDA shows an "electrostatic" dominated hydrogen bonding character for the OH⋯OC hydrogen bonds.
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Affiliation(s)
- Xia Sheng
- College of Chemistry, Chemical and Environmental Engineering, Henan University of Technology, Lianhua Street 100, 450001 Zhengzhou, China
| | - Xiaotong Jiang
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100 Jinan, China
| | - Hailiang Zhao
- College of Chemistry, Chemical and Environmental Engineering, Henan University of Technology, Lianhua Street 100, 450001 Zhengzhou, China; Environment Research Institute, Shandong University, Shanda South Road 27, 250100 Jinan, China
| | - Dongjin Wan
- College of Chemistry, Chemical and Environmental Engineering, Henan University of Technology, Lianhua Street 100, 450001 Zhengzhou, China
| | - Yongde Liu
- College of Chemistry, Chemical and Environmental Engineering, Henan University of Technology, Lianhua Street 100, 450001 Zhengzhou, China
| | - Cleopatra Ashley Ngwenya
- College of Chemistry, Chemical and Environmental Engineering, Henan University of Technology, Lianhua Street 100, 450001 Zhengzhou, China
| | - Lin Du
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100 Jinan, China.
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11
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Jiang X, Tsona NT, Tang S, Du L. Hydrogen bond docking preference in furans: OH⋯π vs. OH⋯O. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 191:155-164. [PMID: 29028507 DOI: 10.1016/j.saa.2017.10.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Revised: 09/23/2017] [Accepted: 10/01/2017] [Indexed: 05/15/2023]
Abstract
The docking sites of hydrogen bonds in complexes formed between 2,2,2-trifluoroethanol (TFE), furan (Fu), and 2-methyl furan (MF) have been investigated. Using density functional theory (DFT) calculations, gas phase and matrix isolation FTIR spectroscopies, the strengths of OH⋯O and OH⋯π hydrogen bonds in the complexes were compared to find the docking preference. Calculations suggest that the hydrogen bond donor, TFE, is more likely to dock onto the oxygen atom of the aromatic furans ring, and consequently, the OH⋯O type hydrogen bond is relatively stronger than the OH⋯π type. The FTIR spectrum in the OH-stretching fundamental range obtained at room temperatures has been compared with that obtained at extremely low temperatures in the matrix. The fundamental and the red shifts of OH-stretching vibrations were observed in both FTIR spectra, confirming the formation of hydrogen bonded complexes. By assessing the ability of furan and MF to participate in the formation of OH⋯O hydrogen bond, the effect of ring methylation has been highlighted. From the calculated geometric and thermodynamic parameters as well as the frequency shift of the OH-stretching vibrations in complexes, TFE-MF is found to be more stable than TFE-Fu, which suggests that the strength of the OH⋯O hydrogen bond in TFE-MF originates from the high activity of the furan molecule caused by the methylation of the aromatic ring. The present study furthers the knowledge of docking preference in heteroaromatic molecules and is helpful to understand the nature of intermolecular interactions between hydrogen bond donors and acceptors, including both electron-deficient atoms and π cloud.
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Affiliation(s)
- Xiaotong Jiang
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Narcisse T Tsona
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Shanshan Tang
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Lin Du
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China.
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12
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Sebastianelli P, Cometto PM, Pereyra RG. Systematic Characterization of Gas Phase Binary Pre-Nucleation Complexes Containing H2SO4 + X, [ X = NH3, (CH3)NH2, (CH3)2NH, (CH3)3N, H2O, (CH3)OH, (CH3)2O, HF, CH3F, PH3, (CH3)PH2, (CH3)2PH, (CH3)3P, H2S, (CH3)SH, (CH3)2S, HCl, (CH3)Cl)]. A Computational Study. J Phys Chem A 2018; 122:2116-2128. [DOI: 10.1021/acs.jpca.7b10205] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Paolo Sebastianelli
- Fa.M.A.F., Universidad Nacional de Córdoba, Medina Allende s/n, Ciudad Universitaria, X5000HUA Córdoba, Argentina
- FCEyN, Universidad Nacional de La Pampa, Uruguay 151, 6300 Santa Rosa, La Pampa, Argentina
| | - Pablo M. Cometto
- FCEyN, Universidad Nacional de La Pampa, Uruguay 151, 6300 Santa Rosa, La Pampa, Argentina
- Atmospheric Chemical Physics Laboratory, INCITAP-CONICET, Uruguay 151, 6300 Santa Rosa, La Pampa, Argentina
| | - Rodolfo G. Pereyra
- Fa.M.A.F., Universidad Nacional de Córdoba, Medina Allende s/n, Ciudad Universitaria, X5000HUA Córdoba, Argentina
- IFEG-CONICET, Medina Allende s/n, Ciudad
Universitaria, X5000HUA Córdoba, Argentina
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13
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Ring-Size Effects on the Stability and Spectral Shifts of Hydrogen Bonded Cyclic Ethers Complexes. Sci Rep 2018; 8:1553. [PMID: 29367625 PMCID: PMC5784011 DOI: 10.1038/s41598-017-18191-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Accepted: 12/07/2017] [Indexed: 11/08/2022] Open
Abstract
In order to investigate ring-size effects on the stability and spectral shifts of hydrogen bonded cyclic ethers complexes, the strength of hydrogen bonds in gas phase complexes formed between 2,2,2-trifluoroethanol (TFE) and selected cyclic ethers were examined using FTIR spectroscopy. TFE was chosen as hydrogen bond donor in these complexes, while trimethylene oxide (TMO), tetrahydrofuran (THF) and tetrahydropyran (THP) were selected as hydrogen bond acceptors. Comparable OH-stretching red shifts were observed in the three kinds of complexes. The difference of red shifts is so small (<7 cm−1) for TFE−TMO/THF/THP complexes that one can conclude that their stabilities and the strength of the hydrogen bonds are nearly similar and do not show any marked dependence with the ring size of the hydrogen bond acceptor. The equilibrium constants for the complexation were determined, and atoms-in-molecules (AIM) and natural bond orbital (NBO) analyses were performed to further investigate the intermolecular interactions. Regardless of the ring size, hydrogen bonds in the complexes showed similar strength, in agreement with the observed OH-stretching red shifts.
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14
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Cheng S, Tang S, Tsona NT, Du L. The Influence of the Position of the Double Bond and Ring Size on the Stability of Hydrogen Bonded Complexes. Sci Rep 2017; 7:11310. [PMID: 28900230 PMCID: PMC5596019 DOI: 10.1038/s41598-017-11921-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 08/31/2017] [Indexed: 11/18/2022] Open
Abstract
To study the influence of the position of the double bond and ring size on the stability of hydrogen bonded complexes, the 1:1 complexes formed between 2,2,2-trifluoroethanol (TFE) and three heterocyclic compounds including 2,3-dihydrofuran (2,3-DHF), 2,5-dihydrofuran (2,5-DHF) and 3,4-dihydropyran (3,4-DHP) were investigated systematically. The formation of hydrogen bonded TFE−2,3-DHF, TFE−2,5-DHF and TFE−3,4-DHP complexes were identified by gas phase FTIR spectroscopy at room temperature, and the OH-stretching fundamental transition of TFE was red shifted upon complexation. The competition between the O atom and π-electrons bonding sites within the complexes was studied, and the O−H···π type hydrogen bond was found to be less stable than the O−H···O in all three cases. The observed red shifts of the OH-stretching fundamental transitions in the complexes were attributed to the formation of O−H···O hydrogen bond. Equilibrium constants of the complexation reactions were determined from measured and calculated OH-stretching fundamental intensities. Both theoretical calculations and experimental results reveal that the hydrogen bond strengths in the complexes follow the sequence: TFE−2,5-DHF > TFE−2,3-DHF ≈ TFE−3,4-DHP, thus the position of the double bond exerts significantly larger influence than ring size on the stability of the selected hydrogen bonded complexes.
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Affiliation(s)
- Shumin Cheng
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Shanshan Tang
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Narcisse T Tsona
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China
| | - Lin Du
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100, Shandong, China.
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15
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Wang P, Zhao N, Tang Y. Halogen Bonding in the Complexes of CH3I and CCl4 with Oxygen-Containing Halogen-Bond Acceptors. J Phys Chem A 2017; 121:5045-5055. [DOI: 10.1021/acs.jpca.7b04342] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Peiwen Wang
- Environment
Research Institute, Shandong University, Shanda South Road 27, 250100 Shandong, China
| | - Nan Zhao
- Environment
Research Institute, Shandong University, Shanda South Road 27, 250100 Shandong, China
| | - Yizhen Tang
- School
of Environmental and municipal engineering, Qingdao University of Technology, Fushun Road 11, 266033 Qingdao, China
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16
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Zhao H, Du L. Atmospheric implication of the hydrogen bonding interaction in hydrated clusters of HONO and dimethylamine in the nighttime. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2017; 19:65-77. [PMID: 28004053 DOI: 10.1039/c6em00598e] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In this study, the stability of clusters formed by the trans- and cis-isomers of nitrous acid (HONO) with dimethylamine (DMA) and water has been characterized by density functional theory. The large red shifts of the OH-stretching transitions of both HONO isomers in the clusters indicate the formation of strong hydrogen bonds. At standard temperature and pressure, H2O (acceptor) binds to HONO (donor) with binding energies of -25.0 to -24.6 kJ mol-1, less stable than those of DMA (acceptor) with HONO (donor) (-50.5 to -45.3 kJ mol-1). Our findings indicate that hydration enhances proton transfer from HONO to DMA, and consequently increases the interaction strength (binding energies = -67.8 to -78.6 kJ mol-1). The topological and generalized Kohn-Sham energy decomposition confirms strong hydrogen bond interactions. The clustering of HONO with DMA in the atmosphere is negligible as compared to the important H2SO4-DMA clusters.
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Affiliation(s)
- Hailiang Zhao
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100 Shandong, China.
| | - Lin Du
- Environment Research Institute, Shandong University, Shanda South Road 27, 250100 Shandong, China.
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17
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Jiang X, Liu S, Tsona NT, Tang S, Ding L, Zhao H, Du L. Matrix isolation FTIR study of hydrogen-bonded complexes of methanol with heterocyclic organic compounds. RSC Adv 2017. [DOI: 10.1039/c6ra26076d] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Hydrogen bonded complexes of heterocyclic compounds with methanol were studied using matrix isolation FTIR spectroscopy and theoretical calculations.
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Affiliation(s)
| | - Shijie Liu
- Environment Research Institute
- Shandong University
- China
| | | | - Shanshan Tang
- Environment Research Institute
- Shandong University
- China
| | - Lei Ding
- Environment Research Institute
- Shandong University
- China
| | - Hailiang Zhao
- Environment Research Institute
- Shandong University
- China
| | - Lin Du
- Environment Research Institute
- Shandong University
- China
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18
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Zhao H, Tang S, Zhang Q, Du L. Weak hydrogen bonding competition between O–H⋯π and O–H⋯Cl. RSC Adv 2017. [DOI: 10.1039/c7ra00901a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The weak hydrogen bonding competition between O–H⋯π and O–H⋯Cl has been studied using FTIR spectroscopy and theoretical calculations.
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Affiliation(s)
- Hailiang Zhao
- Environment Research Institute
- Shandong University
- China
| | - Shanshan Tang
- Environment Research Institute
- Shandong University
- China
| | - Qun Zhang
- Environment Research Institute
- Shandong University
- China
| | - Lin Du
- Environment Research Institute
- Shandong University
- China
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19
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Liu Z, Trindle CO, Gu Q, Wu W, Su P. Unravelling hydrogen bonding interactions of tryptamine–water dimer from neutral to cation. Phys Chem Chem Phys 2017; 19:25260-25269. [DOI: 10.1039/c7cp03491a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The physical origin for the three intermolecular hydrogen bonds in the neutral and cationic forms of the tryptamine–water dimer is explored.
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Affiliation(s)
- Zongyuan Liu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Carl O. Trindle
- Chemistry Department
- University of Virginia
- Charlottesville
- USA
| | - Quanli Gu
- Chemistry Department
- University of Oklahoma
- Norman
- USA
| | - Wei Wu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Peifeng Su
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
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20
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Karas LJ, Batista PR, Viesser RV, Tormena CF, Rittner R, de Oliveira PR. Trends of intramolecular hydrogen bonding in substituted alcohols: a deeper investigation. Phys Chem Chem Phys 2017. [DOI: 10.1039/c7cp03572a] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
NBO analyses were used to perform a deeper investigation on the effects that drive IAHB strength in substituted acyclic alcohols.
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Affiliation(s)
- Lucas J. Karas
- Conformational Analysis and Renewable Resources Laboratory
- Department of Chemistry and Biology
- Federal University of Technology-Paraná
- Curitiba
- Brazil
| | - Patrick R. Batista
- Conformational Analysis and Renewable Resources Laboratory
- Department of Chemistry and Biology
- Federal University of Technology-Paraná
- Curitiba
- Brazil
| | - Renan V. Viesser
- Physical Organic Chemistry Laboratory
- Institute of Chemistry
- University of Campinas
- 13083-970 Campinas
- Brazil
| | - Cláudio F. Tormena
- Physical Organic Chemistry Laboratory
- Institute of Chemistry
- University of Campinas
- 13083-970 Campinas
- Brazil
| | - Roberto Rittner
- Physical Organic Chemistry Laboratory
- Institute of Chemistry
- University of Campinas
- 13083-970 Campinas
- Brazil
| | - Paulo R. de Oliveira
- Conformational Analysis and Renewable Resources Laboratory
- Department of Chemistry and Biology
- Federal University of Technology-Paraná
- Curitiba
- Brazil
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21
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Zhao H, Tang S, Xu X, Du L. Hydrogen Bonding Interaction between Atmospheric Gaseous Amides and Methanol. Int J Mol Sci 2016; 18:ijms18010004. [PMID: 28042825 PMCID: PMC5297639 DOI: 10.3390/ijms18010004] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2016] [Revised: 11/29/2016] [Accepted: 12/12/2016] [Indexed: 12/01/2022] Open
Abstract
Amides are important atmospheric organic–nitrogen compounds. Hydrogen bonded complexes of methanol (MeOH) with amides (formamide, N-methylformamide, N,N-dimethylformamide, acetamide, N-methylacetamide and N,N-dimethylacetamide) have been investigated. The carbonyl oxygen of the amides behaves as a hydrogen bond acceptor and the NH group of the amides acts as a hydrogen bond donor. The dominant hydrogen bonding interaction occurs between the carbonyl oxygen and the OH group of methanol as well as the interaction between the NH group of amides and the oxygen of methanol. However, the hydrogen bonds between the CH group and the carbonyl oxygen or the oxygen of methanol are also important for the overall stability of the complexes. Comparable red shifts of the C=O, NH- and OH-stretching transitions were found in these MeOH–amide complexes with considerable intensity enhancement. Topological analysis shows that the electron density at the bond critical points of the complexes fall in the range of hydrogen bonding criteria, and the Laplacian of charge density of the O–H∙∙∙O hydrogen bond slightly exceeds the upper value of the Laplacian criteria. The energy decomposition analysis further suggests that the hydrogen bonding interaction energies can be mainly attributed to the electrostatic, exchange and dispersion components.
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Affiliation(s)
- Hailiang Zhao
- Environment Research Institute, Shandong University, Shanda South Road 27, Jinan 250100, Shandong, China.
| | - Shanshan Tang
- Environment Research Institute, Shandong University, Shanda South Road 27, Jinan 250100, Shandong, China.
| | - Xiang Xu
- College of Chemistry and Pharmaceutical Sciences, Qingdao Agricultural University, Changcheng Road 700, Qingdao 266109, Shandong, China.
| | - Lin Du
- Environment Research Institute, Shandong University, Shanda South Road 27, Jinan 250100, Shandong, China.
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